iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000013569.1	ENSORLT00000017016.1	ENSORLP00000017015.1
ENSORLG00000013569.1	ENSORLT00000017019.1	ENSORLP00000017018.1
ENSORLG00000013569.1	ENSORLT00000017024.1	ENSORLP00000017023.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	82.35	2.00e-126	448.00	IUUC-Dme-031700
E3 activity/RING/RING	97.52	2.00e-166	582.00	IUUC-Hsa-046357
E3 activity/RING/RING	97.87	1.00e-166	582.00	IUUC-Mmu-064129

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryzias latipes

Functional Description
(View)

E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.

Protein Sequence
(Fasta)

MSRQTATALP TGTSKCPPSQ RVPTLSGTTA SNSDLASLFE CPVCFDYVLP PILQCQSGHL 60
VCSNCRPKLT CCPTCRGPLG SIRNLAMEKV ANSVLFPCKY ASSGCEVTLP HTDKTEHEEL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGCCGCCG GAAGGCAGCA GACGGAGGCC GCCACCACCG TGGACGAGTT CACCGTCCTG 60
GAGGATAAAG AAGAGGAGCT GAAATGCGCC AAGCCGCGCG TGGAACAGGT TTTTAAGGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018121--7-in-absentia-prot_TRAF-dom
IPR004162--SINA-like
IPR008974--TRAF-like
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR013010--Znf_SIAH

PROSITE

PS50089--ZF_RING_2
PS51081--ZF_SIAH

Pfam

PF03145--Sina

Gene Ontology

GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0007275--P:multicellular organism development
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000061	Aegilops tauschii	37.36	4.00e-45	174.00
IUUC-Aml-001186	Ailuropoda melanoleuca	97.16	9.00e-167	578.00
IUUC-Atr-002857	Amborella trichopoda	36.57	6.00e-45	174.00
IUUC-Apl-003813	Anas platyrhynchos	97.16	1.00e-166	578.00
IUUC-Aca-005014	Anolis carolinensis	97.16	7.00e-167	579.00
IUUC-Aly-006522	Arabidopsis lyrata	37.35	1.00e-41	163.00
IUUC-Ath-007049	Arabidopsis thaliana	33.45	6.00e-42	164.00
IUUC-Ame-011196	Astyanax mexicanus	98.94	3.00e-169	587.00
IUUC-Bta-012887	Bos taurus	97.16	9.00e-167	578.00
IUUC-Bdi-014200	Brachypodium distachyon	37.73	2.00e-45	176.00
IUUC-Bol-016263	Brassica oleracea	33.81	1.00e-42	166.00
IUUC-Bra-016910	Brassica rapa	36.82	8.00e-42	163.00
IUUC-Cel-018320	Caenorhabditis elegans	72.37	6.00e-116	410.00
IUUC-Cja-019796	Callithrix jacchus	97.52	2.00e-167	580.00
IUUC-Cfa-020642	Canis familiaris	97.16	1.00e-167	582.00
IUUC-Cpo-022348	Cavia porcellus	97.52	1.00e-167	581.00
IUUC-Csa-023974	Chlorocebus sabaeus	97.52	1.00e-167	582.00
IUUC-Cho-024933	Choloepus hoffmanni	84.92	2.00e-130	457.00
IUUC-Cin-025674	Ciona intestinalis	78.72	5.00e-135	473.00
IUUC-Csv-026233	Ciona savignyi	85.04	2.00e-132	464.00
IUUC-Dre-028041	Danio rerio	99.29	3.00e-170	590.00
IUUC-Dno-029764	Dasypus novemcinctus	97.16	1.00e-166	578.00
IUUC-Dor-030489	Dipodomys ordii	84.70	2.00e-94	337.00
IUUC-Dme-031700	Drosophila melanogaster	84.27	6.00e-120	423.00
IUUC-Ete-032423	Echinops telfairi	96.62	5.00e-156	543.00
IUUC-Eca-033536	Equus caballus	97.16	1.00e-166	578.00
IUUC-Eeu-035314	Erinaceus europaeus	96.62	4.00e-156	543.00
IUUC-Fca-035362	Felis catus	97.16	7.00e-167	579.00
IUUC-Fal-037487	Ficedula albicollis	97.16	1.00e-166	578.00
IUUC-Gmo-039091	Gadus morhua	83.67	1.00e-128	452.00
IUUC-Gga-040269	Gallus gallus	97.16	1.00e-166	578.00
IUUC-Gac-042282	Gasterosteus aculeatus	100.00	2.00e-170	590.00
IUUC-Gma-042926	Glycine max	34.04	7.00e-41	160.00
IUUC-Ggo-045444	Gorilla gorilla	97.52	1.00e-167	582.00
IUUC-Hsa-046357	Homo sapiens	97.52	1.00e-167	582.00
IUUC-Hvu-047574	Hordeum vulgare	37.00	5.00e-45	174.00
IUUC-Itr-048046	Ictidomys tridecemlineatus	97.52	1.00e-167	581.00
IUUC-Lch-049504	Latimeria chalumnae	97.16	1.00e-166	578.00
IUUC-Lpe-050879	Leersia perrieri	40.25	8.00e-43	167.00
IUUC-Loc-052191	Lepisosteus oculatus	97.52	5.00e-167	579.00
IUUC-Laf-053668	Loxodonta africana	97.16	1.00e-166	578.00
IUUC-Mcc-054640	Macaca mulatta	97.52	1.00e-167	582.00
IUUC-Meu-055922	Macropus eugenii	83.33	4.00e-127	446.00
IUUC-Mtr-058747	Medicago truncatula	34.81	2.00e-42	165.00
IUUC-Mga-059503	Meleagris gallopavo	97.16	6.00e-167	579.00
IUUC-Mmr-060794	Microcebus murinus	97.52	1.00e-167	581.00
IUUC-Mdo-061971	Monodelphis domestica	84.92	4.00e-130	456.00
IUUC-Mmu-064129	Mus musculus	97.87	7.00e-168	582.00
IUUC-Mac-065670	Musa acuminata	35.79	4.00e-43	168.00
IUUC-Mpu-066488	Mustela putorius furo	97.16	1.00e-166	578.00
IUUC-Mlu-067207	Myotis lucifugus	97.16	4.00e-167	580.00
IUUC-Nle-069706	Nomascus leucogenys	97.52	1.00e-167	581.00
IUUC-Opr-070341	Ochotona princeps	55.56	4.00e-49	187.00
IUUC-Ont-071849	Oreochromis niloticus	100.00	2.00e-170	590.00
IUUC-Oan-073701	Ornithorhynchus anatinus	52.56	5.00e-49	187.00
IUUC-Ocu-074876	Oryctolagus cuniculus	97.52	2.00e-167	581.00
IUUC-Oba-075454	Oryza barthii	40.66	4.00e-43	168.00
IUUC-Obr-076037	Oryza brachyantha	35.43	1.00e-40	159.00
IUUC-Ogl-077712	Oryza glaberrima	40.66	4.00e-43	168.00
IUUC-Ogu-078910	Oryza glumaepatula	40.83	7.00e-43	167.00
IUUC-Oin-079749	Oryza indica	40.66	4.00e-43	168.00
IUUC-Olo-080244	Oryza longistaminata	35.43	1.00e-40	160.00
IUUC-Ome-081318	Oryza meridionalis	40.66	4.00e-43	167.00
IUUC-Oni-083109	Oryza nivara	40.66	4.00e-43	168.00
IUUC-Opu-084065	Oryza punctata	41.08	2.00e-43	169.00
IUUC-Oru-084785	Oryza rufipogon	40.66	4.00e-43	168.00
IUUC-Osa-085610	Oryza sativa	40.66	4.00e-43	168.00
IUUC-Oga-088399	Otolemur garnettii	97.52	1.00e-167	581.00
IUUC-Oar-089323	Ovis aries	97.16	1.00e-166	578.00
IUUC-Ptr-090692	Pan troglodytes	97.52	9.00e-168	582.00
IUUC-Pan-092012	Papio anubis	97.52	1.00e-167	582.00
IUUC-Psi-093687	Pelodiscus sinensis	97.16	5.00e-167	579.00
IUUC-Pma-094387	Petromyzon marinus	92.58	1.00e-157	548.00
IUUC-Ppa-095212	Physcomitrella patens	35.82	8.00e-41	160.00
IUUC-Pfo-097134	Poecilia formosa	100.00	2.00e-170	590.00
IUUC-Pab-097555	Pongo abelii	97.52	1.00e-167	582.00
IUUC-Pop-099970	Populus trichocarpa	35.29	8.00e-45	173.00
IUUC-Pca-100328	Procavia capensis	84.00	2.00e-126	445.00
IUUC-Ppe-101760	Prunus persica	36.10	2.00e-43	169.00
IUUC-Pva-102368	Pteropus vampyrus	90.00	9.00e-57	213.00
IUUC-Rno-104866	Rattus norvegicus	97.87	7.00e-168	582.00
IUUC-Sha-106547	Sarcophilus harrisii	97.16	9.00e-167	578.00
IUUC-Smo-109412	Selaginella moellendorffii	34.28	7.00e-40	157.00
IUUC-Sit-110595	Setaria italica	37.11	2.00e-42	165.00
IUUC-Sly-111259	Solanum lycopersicum	36.76	9.00e-42	163.00
IUUC-Stu-112571	Solanum tuberosum	36.76	8.00e-42	164.00
IUUC-Sbi-114090	Sorghum bicolor	37.50	3.00e-43	168.00
IUUC-Ssc-116441	Sus scrofa	85.20	6.00e-130	456.00
IUUC-Tgu-116579	Taeniopygia guttata	97.16	1.00e-166	578.00
IUUC-Tru-118250	Takifugu rubripes	94.68	3.00e-160	556.00
IUUC-Tsy-119548	Tarsius syrichta	81.68	7.00e-60	223.00
IUUC-Tni-120488	Tetraodon nigroviridis	98.94	5.00e-166	576.00
IUUC-Tca-121228	Theobroma cacao	36.61	1.00e-41	163.00
IUUC-Tae-123647	Triticum aestivum	37.36	4.00e-45	174.00
IUUC-Tur-126259	Triticum urartu	35.11	9.00e-40	157.00
IUUC-Ttr-129166	Tursiops truncatus	96.68	2.00e-140	491.00
IUUC-Vpa-130799	Vicugna pacos	88.30	1.00e-91	328.00
IUUC-Vvi-131451	Vitis vinifera	37.86	5.00e-42	164.00
IUUC-Xtr-132553	Xenopus tropicalis	97.52	2.00e-167	581.00
IUUC-Xma-133670	Xiphophorus maculatus	100.00	2.00e-170	590.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence