iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-037279

Ensembl Protein ID

ENSFALP00000014418.1

UniProt Accession

U3KHB4; U3KHB4_FICAL

Genbank Protein ID

ENSFALP00000014418

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01000672

Gene Name

ARPC1A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000013815.1	ENSFALT00000014478.1	ENSFALP00000014418.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-14	52.7	51	85

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           H++ +t++++ +  +++v+++ D + +vW+ ++gv
   Q: 51   HNGHITGIDWaPKsDRIVTCGADRNAYVWSQKDGV 85
           9999*******6669**************988776 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MSLHQFLLEP ITCHAWNRDR TQIAISPNNH EVHIYKKSGN QWVKAHELKE HNGHITGIDW 60
APKSDRIVTC GADRNAYVWS QKDGVWKPTL VILRINRAAT FVKWSPLENK FAVGSGARLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG 60
GGGGGGGGGG GCGCGTTGAC TGCTCAGAGT CCGCGAGTCC CGCTCCGCCC CCGCCGCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030140--ARC1A
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0036195--C:muscle cell projection membrane
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

KEGG

fab:101811988

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002044	Ailuropoda melanoleuca	95.14	0.00e+00	714.00
IUUC-Atr-002844	Amborella trichopoda	51.42	6.00e-55	207.00
IUUC-Apl-003325	Anas platyrhynchos	99.19	0.00e+00	768.00
IUUC-Aca-004736	Anolis carolinensis	97.57	0.00e+00	758.00
IUUC-Ago-007966	Ashbya gossypii	39.26	2.00e-66	245.00
IUUC-Acl-008334	Aspergillus clavatus	46.80	5.00e-93	334.00
IUUC-Afl-008485	Aspergillus flavus	47.22	1.00e-90	327.00
IUUC-Afu-008780	Aspergillus fumigatus	46.94	2.00e-94	338.00
IUUC-Ani-009417	Aspergillus nidulans	46.93	8.00e-93	333.00
IUUC-Ang-009543	Aspergillus niger	48.32	3.00e-95	341.00
IUUC-Aor-010234	Aspergillus oryzae	47.50	2.00e-92	332.00
IUUC-Ate-010386	Aspergillus terreus	47.91	9.00e-96	343.00
IUUC-Ame-011852	Astyanax mexicanus	93.24	0.00e+00	724.00
IUUC-Bgr-012192	Blumeria graminis	43.92	7.00e-85	306.00
IUUC-Bta-012530	Bos taurus	95.14	0.00e+00	713.00
IUUC-Bci-013616	Botrytis cinerea	45.71	1.00e-89	322.00
IUUC-Bdi-014632	Brachypodium distachyon	42.70	3.00e-77	281.00
IUUC-Bra-016790	Brassica rapa	41.60	7.00e-81	293.00
IUUC-Cel-018122	Caenorhabditis elegans	56.23	3.00e-112	397.00
IUUC-Cja-019362	Callithrix jacchus	94.86	0.00e+00	714.00
IUUC-Cfa-020167	Canis familiaris	95.14	0.00e+00	714.00
IUUC-Cpo-021933	Cavia porcellus	95.14	0.00e+00	716.00
IUUC-Cho-024449	Choloepus hoffmanni	71.67	1.00e-92	332.00
IUUC-Cin-025186	Ciona intestinalis	55.95	2.00e-117	414.00
IUUC-Csv-026275	Ciona savignyi	56.05	1.00e-113	402.00
IUUC-Cgl-026732	Colletotrichum gloeosporioides	45.40	1.00e-89	322.00
IUUC-Cne-026926	Cryptococcus neoformans	46.40	7.00e-99	353.00
IUUC-Dre-028057	Danio rerio	92.97	0.00e+00	722.00
IUUC-Dno-029092	Dasypus novemcinctus	93.85	0.00e+00	683.00
IUUC-Dor-030391	Dipodomys ordii	94.41	0.00e+00	686.00
IUUC-Dse-031574	Dothistroma septosporum	44.66	2.00e-84	305.00
IUUC-Dme-031907	Drosophila melanogaster	58.19	1.00e-124	439.00
IUUC-Eca-034074	Equus caballus	95.14	0.00e+00	714.00
IUUC-Eeu-035041	Erinaceus europaeus	79.50	2.00e-90	325.00
IUUC-Fca-036154	Felis catus	95.14	0.00e+00	714.00
IUUC-Fox-037842	Fusarium oxysporum	46.52	1.00e-89	323.00
IUUC-Fso-038276	Fusarium solani	46.24	1.00e-89	323.00
IUUC-Gmo-039673	Gadus morhua	89.46	0.00e+00	657.00
IUUC-Ggr-039762	Gaeumannomyces graminis	44.60	1.00e-87	316.00
IUUC-Gga-040189	Gallus gallus	99.19	0.00e+00	768.00
IUUC-Gac-042531	Gasterosteus aculeatus	90.54	0.00e+00	664.00
IUUC-Hsa-046309	Homo sapiens	95.14	0.00e+00	714.00
IUUC-Hvu-047456	Hordeum vulgare	30.72	1.00e-15	75.50
IUUC-Itr-047864	Ictidomys tridecemlineatus	95.14	0.00e+00	714.00
IUUC-Kpa-049288	Komagataella pastoris	40.65	8.00e-76	276.00
IUUC-Lch-050427	Latimeria chalumnae	92.72	0.00e+00	724.00
IUUC-Loc-052532	Lepisosteus oculatus	94.09	0.00e+00	704.00
IUUC-Lma-053109	Leptosphaeria maculans	44.88	1.00e-88	319.00
IUUC-Laf-054271	Loxodonta africana	94.86	0.00e+00	714.00
IUUC-Mcc-054857	Macaca mulatta	93.73	0.00e+00	690.00
IUUC-Meu-056540	Macropus eugenii	92.24	7.00e-180	622.00
IUUC-Mor-057167	Magnaporthe oryzae	43.77	3.00e-86	311.00
IUUC-Mla-058886	Melampsora laricipopulina	43.54	2.00e-89	322.00
IUUC-Mga-059327	Meleagris gallopavo	99.19	0.00e+00	768.00
IUUC-Mvi-060302	Microbotryum violaceum	46.68	5.00e-94	337.00
IUUC-Mmr-060765	Microcebus murinus	93.48	0.00e+00	692.00
IUUC-Mdo-062326	Monodelphis domestica	96.22	0.00e+00	724.00
IUUC-Mmu-063819	Mus musculus	94.32	0.00e+00	712.00
IUUC-Mlu-067184	Myotis lucifugus	95.14	0.00e+00	714.00
IUUC-Nfi-068383	Neosartorya fischeri	47.22	2.00e-94	338.00
IUUC-Ncr-068777	Neurospora crassa	44.23	2.00e-88	318.00
IUUC-Nle-069900	Nomascus leucogenys	95.14	0.00e+00	714.00
IUUC-Opr-070386	Ochotona princeps	86.22	0.00e+00	629.00
IUUC-Ont-071283	Oreochromis niloticus	91.08	0.00e+00	667.00
IUUC-Oan-073139	Ornithorhynchus anatinus	97.03	0.00e+00	728.00
IUUC-Ocu-074340	Oryctolagus cuniculus	95.14	0.00e+00	714.00
IUUC-Opu-083392	Oryza punctata	34.06	8.00e-54	204.00
IUUC-Ola-087274	Oryzias latipes	89.76	0.00e+00	646.00
IUUC-Oga-088016	Otolemur garnettii	94.59	0.00e+00	711.00
IUUC-Oar-090122	Ovis aries	94.86	0.00e+00	712.00
IUUC-Ptr-091548	Pan troglodytes	95.14	0.00e+00	714.00
IUUC-Psi-093767	Pelodiscus sinensis	98.92	0.00e+00	766.00
IUUC-Pma-094124	Petromyzon marinus	79.40	1.00e-180	625.00
IUUC-Pno-095031	Phaeosphaeria nodorum	46.03	1.00e-89	322.00
IUUC-Ppa-095858	Physcomitrella patens	46.34	7.00e-87	313.00
IUUC-Pfo-097107	Poecilia formosa	90.81	0.00e+00	664.00
IUUC-Pop-098954	Populus trichocarpa	37.50	2.00e-43	169.00
IUUC-Pva-102908	Pteropus vampyrus	92.82	0.00e+00	625.00
IUUC-Pgr-103309	Puccinia graminis	45.01	2.00e-92	332.00
IUUC-Ptt-103959	Puccinia triticina	45.09	2.00e-94	338.00
IUUC-Pte-104384	Pyrenophora teres	46.09	2.00e-87	315.00
IUUC-Pyt-104686	Pyrenophora triticirepentis	46.09	1.00e-87	315.00
IUUC-Rno-105008	Rattus norvegicus	93.88	7.00e-180	622.00
IUUC-Sce-106411	Saccharomyces cerevisiae	37.37	2.00e-64	239.00
IUUC-Sha-106691	Sarcophilus harrisii	96.73	0.00e+00	721.00
IUUC-Sja-107792	Schizosaccharomyces japonicus	46.22	2.00e-88	318.00
IUUC-Spo-108053	Schizosaccharomyces pombe	44.65	9.00e-90	323.00
IUUC-Ssl-108606	Sclerotinia sclerotiorum	45.71	2.00e-89	322.00
IUUC-Smo-108836	Selaginella moellendorffii	45.48	1.00e-82	299.00
IUUC-Sar-113599	Sorex araneus	82.40	2.00e-168	584.00
IUUC-Sre-115090	Sporisorium reilianum	46.08	1.00e-96	346.00
IUUC-Ssc-115851	Sus scrofa	94.86	0.00e+00	713.00
IUUC-Tgu-116701	Taeniopygia guttata	100.00	0.00e+00	772.00
IUUC-Tru-117603	Takifugu rubripes	86.70	0.00e+00	669.00
IUUC-Tsy-119515	Tarsius syrichta	87.50	3.00e-73	268.00
IUUC-Tni-119844	Tetraodon nigroviridis	91.62	0.00e+00	665.00
IUUC-Tca-121645	Theobroma cacao	43.40	8.00e-81	293.00
IUUC-Tre-122045	Trichoderma reesei	45.96	5.00e-89	320.00
IUUC-Tvi-122523	Trichoderma virens	45.83	3.00e-89	321.00
IUUC-Tme-127018	Tuber melanosporum	45.21	2.00e-85	308.00
IUUC-Tbe-127321	Tupaia belangeri	94.80	0.00e+00	625.00
IUUC-Ttr-128178	Tursiops truncatus	94.54	0.00e+00	665.00
IUUC-Uma-129423	Ustilago maydis	45.81	8.00e-98	350.00
IUUC-Vda-129706	Verticillium dahliae	46.39	1.00e-90	325.00
IUUC-Xtr-132735	Xenopus tropicalis	87.06	0.00e+00	640.00
IUUC-Xma-133435	Xiphophorus maculatus	90.81	0.00e+00	664.00
IUUC-Yli-134471	Yarrowia lipolytica	45.80	4.00e-82	298.00
IUUC-Zma-135615	Zea mays	41.71	3.00e-79	288.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence