iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006213

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348713

Gene Name

PWP2; ARALYDRAFT_888937

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_101731.1	scaffold_101731.1	scaffold_101731.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-30	104.2	510	541
UBD/Beta-Prp	5.80e-98	328.4	345	596

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDl 30
           gH+++v++l f   + +l+s+s+D+t+++WD+
   Q: 510  GHEAPVHGLMFspLTQILASSSWDNTVRLWDV 541
           8**********8633789*************7 PP

UBD/Beta-Prp

   S: 14   tcvkfspdksllatgsrd.gtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp 104
           t   f + +++l+ g++  g + vwd+++++++ + +gh   v++v++spd+++l+tg++D+ +kvw++ +g+c++t+++h++ v++l+f++
   Q: 345  TTAVFNQRGNWLTFGCAKlGQLLVWDWRSESYILKQQGHYFDVNCVTYSPDSQFLATGADDNKVKVWSVMSGSCFITFTEHTNAVTALHFMA 436
           56678999********876899********************************************************************** PP
   S: 105  sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrt.vrlWdlktgkllrtltgghtdsvyslsfdsngkel 195
           ++++l+s+s d t+r wd + ++ +++  +++ +   +++ +p+g+++ +G+lD++ + +W+ ktg++ + l+g h+ +v+ l f++  + l
   Q: 437  DNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFeIFVWSKKTGQIKDILSG-HEAPVHGLMFSPLTQIL 527
           ***************************999999999******************965****************9.***************** PP
   S: 196  vsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn 264
           +s s d+tv+lwd+ +++  ++   h+  v+ v+f p+++ l+s + Dg+i +Wd+  g l+ tl++++
   Q: 528  ASSSWDNTVRLWDVFASKGTVETFQHNHDVLTVAFRPDGKQLASSTLDGQIHFWDTIEGVLMYTLEGRR 596
           ***************8888889999*********************************99999999987 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MNYRFQNLLG APYRGGNALI TQNTQLISPV GNRVSVTDLN KNHTVTLSLD SSSNICRIAA 60
SPDGTFLLAV DEQNRGLFIN LPRRVVLHRI TFNDNVSALK FSPNGKFIAV GIGKLVQIWR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGGTGAGCA TCCGAACGCT ATGAACTACC GTTTTCAGAA CCTTCTTGGC GCTCCTTACA 60
GAGGCGGGAA TGCACTTATC ACTCAGAATA CTCAGCTAAT TTCACCGGTT GGTAATCGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027145--PWP2
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0009553--P:embryo sac development
GO:0006364--P:rRNA processing

KEGG

aly:ARALYDRAFT_888937

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001932	Ailuropoda melanoleuca	38.82	0.00e+00	677.00
IUUC-Atr-003033	Amborella trichopoda	60.67	0.00e+00	1097.00
IUUC-Apl-003219	Anas platyrhynchos	39.96	0.00e+00	690.00
IUUC-Aca-004950	Anolis carolinensis	40.84	0.00e+00	697.00
IUUC-Ath-006593	Arabidopsis thaliana	93.78	0.00e+00	1692.00
IUUC-Ago-007916	Ashbya gossypii	39.84	0.00e+00	652.00
IUUC-Acl-008225	Aspergillus clavatus	41.78	0.00e+00	719.00
IUUC-Afl-008390	Aspergillus flavus	41.80	0.00e+00	725.00
IUUC-Afu-009039	Aspergillus fumigatus	41.92	0.00e+00	717.00
IUUC-Ani-009228	Aspergillus nidulans	39.39	2.00e-176	612.00
IUUC-Ang-009663	Aspergillus niger	41.90	0.00e+00	703.00
IUUC-Aor-009923	Aspergillus oryzae	41.80	0.00e+00	725.00
IUUC-Ate-010264	Aspergillus terreus	42.35	0.00e+00	731.00
IUUC-Ame-010790	Astyanax mexicanus	33.41	6.00e-66	244.00
IUUC-Bgr-012066	Blumeria graminis	41.35	0.00e+00	702.00
IUUC-Bta-012399	Bos taurus	40.00	0.00e+00	677.00
IUUC-Bci-013757	Botrytis cinerea	46.72	1.00e-156	546.00
IUUC-Bdi-015028	Brachypodium distachyon	65.58	0.00e+00	1150.00
IUUC-Bol-016521	Brassica oleracea	87.83	0.00e+00	1560.00
IUUC-Bra-017096	Brassica rapa	87.83	0.00e+00	1555.00
IUUC-Cel-018690	Caenorhabditis elegans	31.56	6.00e-137	481.00
IUUC-Cja-019229	Callithrix jacchus	40.22	0.00e+00	691.00
IUUC-Cfa-020504	Canis familiaris	39.44	0.00e+00	679.00
IUUC-Cpo-021574	Cavia porcellus	40.62	0.00e+00	706.00
IUUC-Cre-022756	Chlamydomonas reinhardtii	48.21	1.00e-178	619.00
IUUC-Csa-023436	Chlorocebus sabaeus	40.98	0.00e+00	682.00
IUUC-Cin-025397	Ciona intestinalis	38.89	7.00e-155	540.00
IUUC-Csv-026194	Ciona savignyi	43.14	3.00e-132	465.00
IUUC-Cgl-026684	Colletotrichum gloeosporioides	39.60	0.00e+00	644.00
IUUC-Cne-027031	Cryptococcus neoformans	41.63	0.00e+00	732.00
IUUC-Cme-027276	Cyanidioschyzon merolae	31.30	1.00e-105	377.00
IUUC-Dre-027514	Danio rerio	39.76	0.00e+00	673.00
IUUC-Dno-029191	Dasypus novemcinctus	41.27	4.00e-180	624.00
IUUC-Dor-030149	Dipodomys ordii	40.18	0.00e+00	691.00
IUUC-Dse-031260	Dothistroma septosporum	44.91	7.00e-143	500.00
IUUC-Dme-032043	Drosophila melanogaster	36.62	2.00e-170	592.00
IUUC-Ete-033102	Echinops telfairi	44.11	5.00e-149	520.00
IUUC-Eca-033223	Equus caballus	40.35	0.00e+00	697.00
IUUC-Fca-035795	Felis catus	38.50	0.00e+00	633.00
IUUC-Fal-036830	Ficedula albicollis	39.71	0.00e+00	687.00
IUUC-Fox-037835	Fusarium oxysporum	45.12	2.00e-151	529.00
IUUC-Fso-038324	Fusarium solani	45.12	5.00e-154	537.00
IUUC-Gmo-039355	Gadus morhua	39.09	0.00e+00	666.00
IUUC-Ggr-039840	Gaeumannomyces graminis	39.47	3.00e-178	618.00
IUUC-Gga-040907	Gallus gallus	46.01	9.00e-149	519.00
IUUC-Gac-042624	Gasterosteus aculeatus	39.44	0.00e+00	660.00
IUUC-Gma-043034	Glycine max	70.91	0.00e+00	1339.00
IUUC-Hsa-046327	Homo sapiens	40.65	0.00e+00	700.00
IUUC-Hvu-047416	Hordeum vulgare	66.26	0.00e+00	1168.00
IUUC-Itr-049083	Ictidomys tridecemlineatus	40.91	0.00e+00	707.00
IUUC-Kpa-049150	Komagataella pastoris	39.42	5.00e-180	624.00
IUUC-Lch-049460	Latimeria chalumnae	38.13	2.00e-168	585.00
IUUC-Lpe-050840	Leersia perrieri	66.74	0.00e+00	1173.00
IUUC-Loc-052733	Lepisosteus oculatus	39.24	0.00e+00	669.00
IUUC-Lma-053277	Leptosphaeria maculans	45.96	3.00e-162	565.00
IUUC-Laf-054294	Loxodonta africana	40.60	0.00e+00	676.00
IUUC-Mcc-054624	Macaca mulatta	40.87	0.00e+00	702.00
IUUC-Meu-056665	Macropus eugenii	35.58	7.00e-124	437.00
IUUC-Mor-057288	Magnaporthe oryzae	38.96	0.00e+00	629.00
IUUC-Mpo-057594	Magnaporthe poae	39.27	5.00e-179	620.00
IUUC-Mtr-058700	Medicago truncatula	72.45	0.00e+00	1346.00
IUUC-Mla-058846	Melampsora laricipopulina	42.26	0.00e+00	709.00
IUUC-Mga-059207	Meleagris gallopavo	35.83	2.00e-170	592.00
IUUC-Mvi-060327	Microbotryum violaceum	43.53	0.00e+00	755.00
IUUC-Mmr-061264	Microcebus murinus	40.35	0.00e+00	674.00
IUUC-Mdo-062327	Monodelphis domestica	40.56	0.00e+00	699.00
IUUC-Mmu-063542	Mus musculus	39.71	0.00e+00	674.00
IUUC-Mac-065142	Musa acuminata	67.08	0.00e+00	1217.00
IUUC-Mpu-066098	Mustela putorius furo	40.41	3.00e-174	604.00
IUUC-Mlu-067056	Myotis lucifugus	36.75	2.00e-165	575.00
IUUC-Nfi-068323	Neosartorya fischeri	41.68	0.00e+00	720.00
IUUC-Ncr-068925	Neurospora crassa	40.76	0.00e+00	687.00
IUUC-Nle-068970	Nomascus leucogenys	40.76	0.00e+00	697.00
IUUC-Opr-070966	Ochotona princeps	50.48	4.00e-100	358.00
IUUC-Ont-071252	Oreochromis niloticus	39.14	0.00e+00	671.00
IUUC-Oan-072737	Ornithorhynchus anatinus	38.83	0.00e+00	658.00
IUUC-Oba-075794	Oryza barthii	64.99	0.00e+00	1156.00
IUUC-Obr-076617	Oryza brachyantha	66.67	0.00e+00	1196.00
IUUC-Ogl-077022	Oryza glaberrima	66.37	0.00e+00	1200.00
IUUC-Ogu-078757	Oryza glumaepatula	54.58	0.00e+00	895.00
IUUC-Oin-079813	Oryza indica	66.33	0.00e+00	1196.00
IUUC-Olo-080265	Oryza longistaminata	66.55	0.00e+00	1195.00
IUUC-Ome-081494	Oryza meridionalis	66.93	0.00e+00	1194.00
IUUC-Oni-082639	Oryza nivara	54.63	0.00e+00	895.00
IUUC-Opu-084005	Oryza punctata	67.75	0.00e+00	1210.00
IUUC-Oru-084883	Oryza rufipogon	54.40	0.00e+00	894.00
IUUC-Osa-086158	Oryza sativa	66.55	0.00e+00	1194.00
IUUC-Ola-086822	Oryzias latipes	39.62	0.00e+00	663.00
IUUC-Olu-087741	Ostreococcus lucimarinus	33.86	4.00e-22	96.30
IUUC-Oga-088887	Otolemur garnettii	39.74	0.00e+00	676.00
IUUC-Oar-090110	Ovis aries	39.31	0.00e+00	643.00
IUUC-Pan-092808	Papio anubis	40.76	0.00e+00	706.00
IUUC-Psi-093954	Pelodiscus sinensis	40.09	0.00e+00	695.00
IUUC-Pno-094922	Phaeosphaeria nodorum	45.63	1.00e-163	569.00
IUUC-Ppa-095678	Physcomitrella patens	55.54	0.00e+00	950.00
IUUC-Pfo-097175	Poecilia formosa	40.31	0.00e+00	692.00
IUUC-Pab-098155	Pongo abelii	40.07	0.00e+00	697.00
IUUC-Pop-099635	Populus trichocarpa	75.11	0.00e+00	1358.00
IUUC-Pca-100947	Procavia capensis	39.04	0.00e+00	649.00
IUUC-Ppe-101552	Prunus persica	75.70	0.00e+00	1408.00
IUUC-Pva-102744	Pteropus vampyrus	37.49	7.00e-171	593.00
IUUC-Pgr-103389	Puccinia graminis	42.26	0.00e+00	695.00
IUUC-Ptt-103953	Puccinia triticina	37.07	1.00e-159	556.00
IUUC-Pte-104079	Pyrenophora teres	46.17	1.00e-161	563.00
IUUC-Pyt-104656	Pyrenophora triticirepentis	46.17	1.00e-161	562.00
IUUC-Rno-105502	Rattus norvegicus	39.73	0.00e+00	690.00
IUUC-Sce-106390	Saccharomyces cerevisiae	40.44	0.00e+00	682.00
IUUC-Sha-107264	Sarcophilus harrisii	40.79	6.00e-90	323.00
IUUC-Sja-107674	Schizosaccharomyces japonicus	39.80	0.00e+00	683.00
IUUC-Spo-108348	Schizosaccharomyces pombe	41.18	0.00e+00	692.00
IUUC-Smo-108982	Selaginella moellendorffii	57.11	0.00e+00	1034.00
IUUC-Sit-110304	Setaria italica	66.55	0.00e+00	1220.00
IUUC-Sly-111620	Solanum lycopersicum	76.98	0.00e+00	924.00
IUUC-Stu-112877	Solanum tuberosum	72.50	0.00e+00	1340.00
IUUC-Sbi-114702	Sorghum bicolor	66.26	0.00e+00	1201.00
IUUC-Sre-115129	Sporisorium reilianum	41.69	0.00e+00	672.00
IUUC-Ssc-115931	Sus scrofa	43.65	2.00e-93	335.00
IUUC-Tgu-116787	Taeniopygia guttata	39.51	0.00e+00	687.00
IUUC-Tru-118218	Takifugu rubripes	39.85	0.00e+00	677.00
IUUC-Tsy-119401	Tarsius syrichta	43.84	5.00e-117	414.00
IUUC-Tni-120046	Tetraodon nigroviridis	39.29	0.00e+00	638.00
IUUC-Tca-121685	Theobroma cacao	73.94	0.00e+00	1389.00
IUUC-Tre-122154	Trichoderma reesei	41.65	0.00e+00	697.00
IUUC-Tvi-122451	Trichoderma virens	45.34	4.00e-160	558.00
IUUC-Tae-125397	Triticum aestivum	72.61	0.00e+00	708.00
IUUC-Tur-126650	Triticum urartu	67.47	0.00e+00	1092.00
IUUC-Tme-127005	Tuber melanosporum	42.35	0.00e+00	700.00
IUUC-Tbe-128102	Tupaia belangeri	39.48	4.00e-118	418.00
IUUC-Ttr-128259	Tursiops truncatus	40.57	0.00e+00	671.00
IUUC-Uma-129511	Ustilago maydis	42.24	0.00e+00	683.00
IUUC-Vda-129833	Verticillium dahliae	40.72	2.00e-134	473.00
IUUC-Vvi-131572	Vitis vinifera	70.50	0.00e+00	1288.00
IUUC-Xtr-131776	Xenopus tropicalis	34.09	1.00e-60	227.00
IUUC-Xma-133887	Xiphophorus maculatus	39.87	0.00e+00	671.00
IUUC-Yli-134427	Yarrowia lipolytica	40.35	0.00e+00	670.00
IUUC-Zma-135980	Zea mays	65.59	0.00e+00	1162.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence