iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099095

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000350

Gene Name

POPTRDRAFT_572777; POPTR_0014s13180g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s13180	POPTR_0014s13180.1	POPTR_0014s13180.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-27	94.6	254	284

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWD 29
           Ht++v+ ++f   s++l+ sGsdD+ +kvWD
   Q: 254  HTSDVNTVCFadeSGHLIFSGSDDNLCKVWD 284
           ***********766699************** PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGYAMSRLET ESELCDGGKT IPEAGSSKRA SNWLNNLDHE IAQVTKLKSS PHKQLAELVP 60
GMHKSSVSTV KMLVGREANY SARGRFSAAD RCHMLSRYLP VNGPWLVDQM STRAYVSQFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAAAAAAAC AACGAAAATA TCCGTACCTG TACATACTAT CCATTCACGT CCGTTCATCC 60
AAACATTATC AACTGCGACG GTGAAGCCCA GCAACCGAAG AAGAAGAAGA AGAAAGGTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR017399--DCAF11/LEC14B
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0014s13180g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000492	Aegilops tauschii	57.14	8.00e-139	486.00
IUUC-Aml-001732	Ailuropoda melanoleuca	44.39	1.00e-92	333.00
IUUC-Atr-002856	Amborella trichopoda	62.35	9.00e-155	539.00
IUUC-Aca-005081	Anolis carolinensis	43.38	5.00e-93	334.00
IUUC-Aly-006571	Arabidopsis lyrata	78.96	0.00e+00	779.00
IUUC-Ath-007313	Arabidopsis thaliana	79.17	0.00e+00	778.00
IUUC-Bgr-012310	Blumeria graminis	37.73	6.00e-66	244.00
IUUC-Bta-013043	Bos taurus	44.13	8.00e-92	330.00
IUUC-Bci-013758	Botrytis cinerea	38.31	1.00e-68	254.00
IUUC-Bdi-014379	Brachypodium distachyon	63.74	5.00e-166	577.00
IUUC-Bol-016186	Brassica oleracea	77.20	0.00e+00	738.00
IUUC-Bra-018035	Brassica rapa	76.35	0.00e+00	727.00
IUUC-Cja-018940	Callithrix jacchus	43.88	9.00e-92	330.00
IUUC-Cfa-020064	Canis familiaris	44.64	4.00e-93	335.00
IUUC-Cpo-022220	Cavia porcellus	43.88	1.00e-91	330.00
IUUC-Cre-022728	Chlamydomonas reinhardtii	48.10	2.00e-62	231.00
IUUC-Csa-023158	Chlorocebus sabaeus	44.13	3.00e-92	332.00
IUUC-Cho-024797	Choloepus hoffmanni	55.79	9.00e-25	107.00
IUUC-Cgl-026444	Colletotrichum gloeosporioides	40.41	3.00e-73	269.00
IUUC-Cne-026917	Cryptococcus neoformans	37.79	7.00e-61	228.00
IUUC-Cme-027273	Cyanidioschyzon merolae	33.11	3.00e-51	196.00
IUUC-Dno-029851	Dasypus novemcinctus	43.62	5.00e-90	324.00
IUUC-Dor-030952	Dipodomys ordii	43.67	7.00e-87	313.00
IUUC-Dme-031925	Drosophila melanogaster	32.45	4.00e-56	211.00
IUUC-Ete-032983	Echinops telfairi	40.49	2.00e-85	308.00
IUUC-Eca-033499	Equus caballus	43.88	3.00e-91	328.00
IUUC-Eeu-035179	Erinaceus europaeus	44.87	3.00e-71	261.00
IUUC-Fca-035615	Felis catus	44.64	7.00e-93	333.00
IUUC-Gmo-038731	Gadus morhua	43.60	2.00e-89	322.00
IUUC-Ggr-039861	Gaeumannomyces graminis	40.15	6.00e-71	261.00
IUUC-Gac-041615	Gasterosteus aculeatus	43.07	8.00e-87	313.00
IUUC-Gma-043167	Glycine max	78.29	0.00e+00	788.00
IUUC-Hsa-046061	Homo sapiens	44.13	2.00e-92	332.00
IUUC-Itr-048985	Ictidomys tridecemlineatus	42.86	5.00e-93	334.00
IUUC-Lpe-051521	Leersia perrieri	59.68	6.00e-153	533.00
IUUC-Laf-054259	Loxodonta africana	43.99	3.00e-92	332.00
IUUC-Mcc-054958	Macaca mulatta	44.13	2.00e-92	332.00
IUUC-Meu-056889	Macropus eugenii	42.79	1.00e-90	326.00
IUUC-Mtr-058464	Medicago truncatula	74.43	0.00e+00	757.00
IUUC-Mmr-061329	Microcebus murinus	41.61	2.00e-87	316.00
IUUC-Mdo-062123	Monodelphis domestica	41.49	4.00e-91	328.00
IUUC-Mmu-063616	Mus musculus	43.07	2.00e-90	325.00
IUUC-Mac-064473	Musa acuminata	63.47	2.00e-170	591.00
IUUC-Mpu-066351	Mustela putorius furo	43.68	3.00e-77	281.00
IUUC-Mlu-067043	Myotis lucifugus	44.13	2.00e-91	329.00
IUUC-Ncr-068715	Neurospora crassa	38.68	4.00e-70	258.00
IUUC-Nle-070052	Nomascus leucogenys	44.25	6.00e-92	330.00
IUUC-Opr-070605	Ochotona princeps	43.30	1.00e-94	339.00
IUUC-Ont-072411	Oreochromis niloticus	43.51	1.00e-84	306.00
IUUC-Ocu-074078	Oryctolagus cuniculus	44.13	8.00e-92	330.00
IUUC-Oba-075609	Oryza barthii	63.82	5.00e-167	580.00
IUUC-Obr-076243	Oryza brachyantha	63.70	2.00e-166	577.00
IUUC-Ogl-077467	Oryza glaberrima	63.82	3.00e-167	580.00
IUUC-Ogu-078264	Oryza glumaepatula	57.64	8.00e-157	546.00
IUUC-Oin-079588	Oryza indica	63.60	9.00e-167	579.00
IUUC-Olo-080362	Oryza longistaminata	55.02	3.00e-146	511.00
IUUC-Ome-081874	Oryza meridionalis	63.82	5.00e-167	580.00
IUUC-Oni-082655	Oryza nivara	63.82	5.00e-167	580.00
IUUC-Opu-084069	Oryza punctata	66.19	7.00e-163	566.00
IUUC-Oru-085209	Oryza rufipogon	63.82	5.00e-167	580.00
IUUC-Osa-086287	Oryza sativa	63.82	3.00e-166	577.00
IUUC-Ola-086329	Oryzias latipes	44.47	3.00e-90	325.00
IUUC-Oga-088779	Otolemur garnettii	43.73	3.00e-91	328.00
IUUC-Oar-089262	Ovis aries	44.13	7.00e-92	330.00
IUUC-Ptr-091346	Pan troglodytes	44.13	2.00e-92	332.00
IUUC-Pan-092716	Papio anubis	44.13	2.00e-92	332.00
IUUC-Pma-094148	Petromyzon marinus	46.15	3.00e-72	264.00
IUUC-Ppa-095260	Physcomitrella patens	64.62	2.00e-162	565.00
IUUC-Pfo-096424	Poecilia formosa	42.82	1.00e-88	319.00
IUUC-Pab-098091	Pongo abelii	42.09	3.00e-84	305.00
IUUC-Pca-100153	Procavia capensis	44.02	6.00e-91	327.00
IUUC-Ppe-102075	Prunus persica	72.73	0.00e+00	702.00
IUUC-Pva-102598	Pteropus vampyrus	43.88	3.00e-91	328.00
IUUC-Rno-104890	Rattus norvegicus	43.73	1.00e-90	326.00
IUUC-Sha-106540	Sarcophilus harrisii	42.92	6.00e-90	324.00
IUUC-Smo-109019	Selaginella moellendorffii	57.91	8.00e-132	462.00
IUUC-Sit-110726	Setaria italica	62.56	2.00e-166	578.00
IUUC-Sly-110856	Solanum lycopersicum	74.32	0.00e+00	746.00
IUUC-Sar-113742	Sorex araneus	40.71	2.00e-89	322.00
IUUC-Sbi-113786	Sorghum bicolor	48.37	1.00e-120	425.00
IUUC-Ssc-116019	Sus scrofa	43.47	1.00e-93	336.00
IUUC-Tru-118536	Takifugu rubripes	44.36	1.00e-88	320.00
IUUC-Tsy-119518	Tarsius syrichta	44.39	8.00e-93	333.00
IUUC-Tni-120264	Tetraodon nigroviridis	44.72	1.00e-89	323.00
IUUC-Tca-121554	Theobroma cacao	80.71	0.00e+00	805.00
IUUC-Tae-125890	Triticum aestivum	63.74	2.00e-164	571.00
IUUC-Tur-126714	Triticum urartu	59.56	9.00e-149	519.00
IUUC-Tme-127050	Tuber melanosporum	40.10	3.00e-78	285.00
IUUC-Tbe-127495	Tupaia belangeri	44.13	2.00e-92	332.00
IUUC-Ttr-128553	Tursiops truncatus	44.39	3.00e-92	331.00
IUUC-Vda-129951	Verticillium dahliae	40.15	5.00e-72	265.00
IUUC-Vvi-131266	Vitis vinifera	80.17	0.00e+00	803.00
IUUC-Xtr-132525	Xenopus tropicalis	43.99	6.00e-91	327.00
IUUC-Xma-133165	Xiphophorus maculatus	43.83	1.00e-89	323.00
IUUC-Zma-135874	Zea mays	61.89	3.00e-162	563.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence