iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Loc-052355

Ensembl Protein ID

ENSLOCP00000004460.1

UniProt Accession

W5M7V2; W5M7V2_LEPOC

Genbank Protein ID

ENSLOCP00000004460

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AHAT01011165

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLOCG00000003740.1	ENSLOCT00000004468.1	ENSLOCP00000004460.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	3.70e-20	71.5	196	234
ULD/UDP/UBQ/UBQ_PIM	2.60e-25	88.3	2	79

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLldg 41
           +e ++ ++++MG++re+++ aLra++nn+++AveyLl+g
   Q: 196  YENLVTEIMSMGYEREQVIAALRASYNNPDRAVEYLLTG 234
           678999*******************************97 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           +++t+ktl++++f++e++++ tv+ lKeki++e+g   +p++ qkLIyaGkiL+Dd +L++++i+++++v+++v+k+k
   Q: 2    LTITLKTLQQQTFKIEIDPELTVKTLKEKIEAEKGsesYPASGQKLIYAGKILNDDIPLKDYKIDEKNFVVVMVTKPK 79
           58*************************************************************************997 PP

Organism

Lepisosteus oculatus

Protein Sequence
(Fasta)

MLTITLKTLQ QQTFKIEIDP ELTVKTLKEK IEAEKGSESY PASGQKLIYA GKILNDDIPL 60
KDYKIDEKNF VVVMVTKPKP ACPPPPPSQA PPAPAVVSMP PPAPAPPAVT PAPSEECVPP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTAGGTGCC GAAGTCGGAA CAGAGCCCCC GTCAGGCCCT AGAAGTATCC TTGCTACTTG 60
AATAAACAAA ATCTCCTCCC CACTGCCGAG GAGAACTGCA CTTAAAAAGT AGATTATTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011107	Astyanax mexicanus	80.35	5.00e-67	248.00
IUUC-Gac-041621	Gasterosteus aculeatus	67.63	5.00e-69	254.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence