iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000017015.1	ENSONIT00000021481.1	ENSONIP00000021462.1
ENSONIG00000017015.1	ENSONIT00000021482.1	ENSONIP00000021463.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.60e-07	30.1	246	280

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sd.tllvsGs.dDgtikvWDlrtgvl 35
           +  vt++a+ ++  llvs+s  D  ++vWD+    +
   Q: 246  AP-VTSIAWsPSgSLLVSASpMDTAMMVWDVAAESC 280
           44.*******666999**999*********987766 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MCSLALFPPP LPYGQTTVCE SNNELLSGSS TEDQLKQTYQ SQDFSPPSLS FPRESLKLHS 60
RTENSSKAAF LDHSETLWMR SAAAWRDGGL TGLLNEITNS HPEVPKWLSM SSGCILALLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACGCCTTGA AATGATACTT CTTTATATAT ATATACATTT TTGTTAAGAT CAAATAGTGA 60
ATTTGACACT CCTGATCTAA ATAAATTGTA CTTGTTTGCC TGTGTGTAGT TCAAGTGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR002469--Peptidase_S9B_N
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004244	Anolis carolinensis	57.57	3.00e-167	581.00
IUUC-Ame-011057	Astyanax mexicanus	73.41	0.00e+00	767.00
IUUC-Bdi-014681	Brachypodium distachyon	26.78	3.00e-32	133.00
IUUC-Fal-037314	Ficedula albicollis	72.50	5.00e-30	122.00
IUUC-Gmo-038799	Gadus morhua	77.84	0.00e+00	819.00
IUUC-Gga-040339	Gallus gallus	64.44	2.00e-143	502.00
IUUC-Gac-042090	Gasterosteus aculeatus	82.57	0.00e+00	842.00
IUUC-Mga-059251	Meleagris gallopavo	60.10	2.00e-138	485.00
IUUC-Mlu-068047	Myotis lucifugus	57.44	9.00e-173	600.00
IUUC-Obr-076080	Oryza brachyantha	27.32	1.00e-33	137.00
IUUC-Ogl-077458	Oryza glaberrima	27.53	3.00e-31	129.00
IUUC-Oin-079362	Oryza indica	26.50	7.00e-25	108.00
IUUC-Osa-086220	Oryza sativa	26.76	1.00e-30	127.00
IUUC-Ola-086764	Oryzias latipes	81.39	0.00e+00	827.00
IUUC-Pfo-096975	Poecilia formosa	82.73	0.00e+00	879.00
IUUC-Stu-112394	Solanum tuberosum	28.46	2.00e-37	150.00
IUUC-Tgu-117444	Taeniopygia guttata	72.29	4.00e-69	253.00
IUUC-Tru-117902	Takifugu rubripes	83.69	0.00e+00	830.00
IUUC-Tni-120875	Tetraodon nigroviridis	83.72	0.00e+00	849.00
IUUC-Tca-121629	Theobroma cacao	28.84	9.00e-37	147.00
IUUC-Tae-124663	Triticum aestivum	26.50	2.00e-29	124.00
IUUC-Vpa-130424	Vicugna pacos	42.95	2.00e-64	239.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence