iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gga-041133

Ensembl Protein ID

ENSGALP00000025797.1

UniProt Accession

F1P2D7; F1P2D7_CHICK

Genbank Protein ID

ENSGALP00000025797

Protein Name

Chromatin assembly factor 1 subunit B

Genbank Nucleotide ID

AADN04000269

Gene Name

CHAF1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000016042.3	ENSGALT00000025844.2	ENSGALP00000025797.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-20	71.7	127	162

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH ++v+++++ sd ++++s+s D+t  +WD+ +g 
   Q: 127  GHLEDVYDICWtSDgNYMASASVDNTAIMWDVVKGQ 162
           89**********999****************99886 PP

Organism

Gallus gallus

Protein Sequence
(Fasta)

MKVITCEIAW HNKEPVYSLD FQHGTDGKIN RLASAGVDTA VRVWKVEKGP DGKAIVEFLS 60
NLARHTKAVN VVRFSPSGEV LASGGDDAVI LLWKLNDSKE LEPLAFQDED EAQLNKENWT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGGGTTGGG GGCGCGGGCG GCCGTTACAG CGGTTGGGGC TGAGGGGGGA GGCACGCAGG 60
GCGGCCAAGC GAACGATCAG ATGCTTTCTG AAGGATCAGA TGCAGAGCGT GTGGTGCGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR029129--CAF1_p60_C
IPR001632--Gprotein_B
IPR002469--Peptidase_S9B_N
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF15512--CAF-1_p60_C
PF00400--WD40

PRINTS

PR00319--GPROTEINB

SMART

SM00320--WD40

Gene Ontology

GO:0033186--C:CAF-1 complex
GO:0005829--C:cytosol
GO:0000790--C:nuclear chromatin
GO:0005654--C:nucleoplasm
GO:0006335--P:DNA replication-dependent nucleosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000474	Aegilops tauschii	40.84	6.00e-84	304.00
IUUC-Aml-001755	Ailuropoda melanoleuca	72.65	0.00e+00	799.00
IUUC-Atr-002674	Amborella trichopoda	40.73	3.00e-86	311.00
IUUC-Apl-003701	Anas platyrhynchos	91.17	0.00e+00	1066.00
IUUC-Aca-004692	Anolis carolinensis	77.13	0.00e+00	852.00
IUUC-Aly-006286	Arabidopsis lyrata	42.16	7.00e-88	317.00
IUUC-Ath-007683	Arabidopsis thaliana	41.44	1.00e-86	313.00
IUUC-Ago-007940	Ashbya gossypii	34.33	2.00e-64	239.00
IUUC-Acl-008070	Aspergillus clavatus	43.87	1.00e-44	174.00
IUUC-Afl-008414	Aspergillus flavus	41.71	1.00e-44	174.00
IUUC-Afu-009046	Aspergillus fumigatus	45.56	3.00e-21	96.70
IUUC-Ani-009399	Aspergillus nidulans	44.34	5.00e-44	172.00
IUUC-Ang-009650	Aspergillus niger	40.55	4.00e-42	166.00
IUUC-Aor-009937	Aspergillus oryzae	41.71	1.00e-44	174.00
IUUC-Ate-010505	Aspergillus terreus	36.02	2.00e-28	119.00
IUUC-Ame-011094	Astyanax mexicanus	65.05	0.00e+00	666.00
IUUC-Bgr-012005	Blumeria graminis	41.59	2.00e-40	160.00
IUUC-Bta-013423	Bos taurus	75.76	0.00e+00	790.00
IUUC-Bci-013847	Botrytis cinerea	40.28	3.00e-42	166.00
IUUC-Bdi-014860	Brachypodium distachyon	42.08	2.00e-83	302.00
IUUC-Bol-016603	Brassica oleracea	39.71	7.00e-83	300.00
IUUC-Bra-017175	Brassica rapa	38.26	2.00e-80	293.00
IUUC-Cel-018272	Caenorhabditis elegans	34.19	1.00e-58	219.00
IUUC-Cja-019558	Callithrix jacchus	72.01	0.00e+00	793.00
IUUC-Cfa-020900	Canis familiaris	71.65	0.00e+00	787.00
IUUC-Cpo-022054	Cavia porcellus	69.96	0.00e+00	703.00
IUUC-Csa-023850	Chlorocebus sabaeus	73.00	0.00e+00	798.00
IUUC-Cho-024510	Choloepus hoffmanni	78.20	3.00e-133	468.00
IUUC-Cin-025178	Ciona intestinalis	49.50	3.00e-111	395.00
IUUC-Cgl-026572	Colletotrichum gloeosporioides	42.77	1.00e-35	144.00
IUUC-Cne-027015	Cryptococcus neoformans	35.80	2.00e-37	150.00
IUUC-Cme-027136	Cyanidioschyzon merolae	30.02	5.00e-59	221.00
IUUC-Dre-027879	Danio rerio	58.44	0.00e+00	679.00
IUUC-Dno-029335	Dasypus novemcinctus	73.76	0.00e+00	818.00
IUUC-Dor-030520	Dipodomys ordii	59.96	1.00e-172	599.00
IUUC-Dse-031566	Dothistroma septosporum	40.45	8.00e-42	165.00
IUUC-Dme-031838	Drosophila melanogaster	46.35	5.00e-109	388.00
IUUC-Eca-033563	Equus caballus	74.33	0.00e+00	823.00
IUUC-Fca-036052	Felis catus	74.05	0.00e+00	799.00
IUUC-Fal-037080	Ficedula albicollis	81.79	0.00e+00	968.00
IUUC-Fox-038022	Fusarium oxysporum	40.38	5.00e-41	162.00
IUUC-Fso-038115	Fusarium solani	39.91	7.00e-40	158.00
IUUC-Gmo-039461	Gadus morhua	69.43	3.00e-134	470.00
IUUC-Ggr-040100	Gaeumannomyces graminis	39.34	1.00e-39	157.00
IUUC-Gac-041769	Gasterosteus aculeatus	65.45	0.00e+00	661.00
IUUC-Gma-043339	Glycine max	40.59	5.00e-93	335.00
IUUC-Ggo-044561	Gorilla gorilla	72.92	0.00e+00	796.00
IUUC-Hsa-046150	Homo sapiens	73.36	0.00e+00	801.00
IUUC-Hvu-047792	Hordeum vulgare	40.69	9.00e-54	202.00
IUUC-Itr-048630	Ictidomys tridecemlineatus	77.03	0.00e+00	806.00
IUUC-Kpa-049397	Komagataella pastoris	37.00	5.00e-81	294.00
IUUC-Lch-050365	Latimeria chalumnae	56.78	1.00e-149	523.00
IUUC-Lpe-050875	Leersia perrieri	40.84	5.00e-84	304.00
IUUC-Loc-052770	Lepisosteus oculatus	68.74	0.00e+00	686.00
IUUC-Lma-053291	Leptosphaeria maculans	39.55	2.00e-40	160.00
IUUC-Laf-053505	Loxodonta africana	73.86	0.00e+00	837.00
IUUC-Mcc-054803	Macaca mulatta	73.18	0.00e+00	799.00
IUUC-Meu-056578	Macropus eugenii	64.17	0.00e+00	691.00
IUUC-Mor-057211	Magnaporthe oryzae	40.09	5.00e-39	155.00
IUUC-Mpo-057411	Magnaporthe poae	39.34	5.00e-39	155.00
IUUC-Mtr-058066	Medicago truncatula	42.33	2.00e-93	335.00
IUUC-Mga-059735	Meleagris gallopavo	96.64	0.00e+00	1137.00
IUUC-Mmr-061343	Microcebus murinus	73.08	0.00e+00	814.00
IUUC-Mdo-062065	Monodelphis domestica	73.73	0.00e+00	833.00
IUUC-Mmu-063501	Mus musculus	74.25	0.00e+00	797.00
IUUC-Mac-064864	Musa acuminata	40.59	3.00e-84	305.00
IUUC-Mpu-066549	Mustela putorius furo	72.40	0.00e+00	778.00
IUUC-Mlu-067121	Myotis lucifugus	70.61	0.00e+00	763.00
IUUC-Nfi-068462	Neosartorya fischeri	43.40	4.00e-45	176.00
IUUC-Ncr-068838	Neurospora crassa	39.81	4.00e-40	159.00
IUUC-Nle-069854	Nomascus leucogenys	73.71	0.00e+00	796.00
IUUC-Opr-070803	Ochotona princeps	68.52	0.00e+00	720.00
IUUC-Ont-071642	Oreochromis niloticus	57.81	0.00e+00	672.00
IUUC-Oan-073675	Ornithorhynchus anatinus	72.60	0.00e+00	803.00
IUUC-Ocu-073863	Oryctolagus cuniculus	85.86	0.00e+00	713.00
IUUC-Oba-075682	Oryza barthii	40.35	5.00e-80	291.00
IUUC-Obr-076039	Oryza brachyantha	41.09	4.00e-85	308.00
IUUC-Ogu-078021	Oryza glumaepatula	41.34	8.00e-85	307.00
IUUC-Oin-079908	Oryza indica	36.13	7.00e-66	244.00
IUUC-Olo-081063	Oryza longistaminata	41.34	6.00e-85	307.00
IUUC-Ome-081930	Oryza meridionalis	41.34	1.00e-84	306.00
IUUC-Oni-082547	Oryza nivara	41.34	4.00e-85	308.00
IUUC-Opu-084089	Oryza punctata	40.59	6.00e-82	298.00
IUUC-Oru-084844	Oryza rufipogon	41.34	1.00e-84	306.00
IUUC-Osa-085582	Oryza sativa	41.34	1.00e-84	306.00
IUUC-Ola-087187	Oryzias latipes	61.04	0.00e+00	691.00
IUUC-Olu-087792	Ostreococcus lucimarinus	38.03	3.00e-77	281.00
IUUC-Oga-088390	Otolemur garnettii	70.82	0.00e+00	795.00
IUUC-Oar-089740	Ovis aries	70.52	0.00e+00	760.00
IUUC-Ptr-091581	Pan troglodytes	73.53	0.00e+00	803.00
IUUC-Pan-092258	Papio anubis	69.07	0.00e+00	709.00
IUUC-Psi-093761	Pelodiscus sinensis	81.88	0.00e+00	958.00
IUUC-Ppa-095428	Physcomitrella patens	36.21	2.00e-96	346.00
IUUC-Pfo-097357	Poecilia formosa	64.71	0.00e+00	659.00
IUUC-Pab-098520	Pongo abelii	73.36	0.00e+00	800.00
IUUC-Pop-099331	Populus trichocarpa	41.65	2.00e-86	312.00
IUUC-Ppe-101548	Prunus persica	40.89	8.00e-86	310.00
IUUC-Pva-103243	Pteropus vampyrus	71.37	0.00e+00	715.00
IUUC-Pgr-103591	Puccinia graminis	32.47	2.00e-34	140.00
IUUC-Pte-104247	Pyrenophora teres	39.91	2.00e-40	160.00
IUUC-Pyt-104641	Pyrenophora triticirepentis	39.91	2.00e-40	160.00
IUUC-Rno-105202	Rattus norvegicus	75.77	0.00e+00	799.00
IUUC-Sce-106250	Saccharomyces cerevisiae	36.26	5.00e-72	264.00
IUUC-Sha-107036	Sarcophilus harrisii	74.04	0.00e+00	848.00
IUUC-Sja-107912	Schizosaccharomyces japonicus	36.34	4.00e-76	278.00
IUUC-Spo-108050	Schizosaccharomyces pombe	32.14	8.00e-70	257.00
IUUC-Ssl-108607	Sclerotinia sclerotiorum	38.27	1.00e-42	167.00
IUUC-Sit-109838	Setaria italica	42.05	1.00e-86	313.00
IUUC-Sly-110872	Solanum lycopersicum	40.80	3.00e-86	311.00
IUUC-Stu-111933	Solanum tuberosum	39.32	2.00e-81	296.00
IUUC-Sbi-114587	Sorghum bicolor	41.28	2.00e-84	306.00
IUUC-Ssc-115462	Sus scrofa	73.13	0.00e+00	800.00
IUUC-Tgu-117186	Taeniopygia guttata	84.35	0.00e+00	939.00
IUUC-Tru-118310	Takifugu rubripes	65.25	0.00e+00	665.00
IUUC-Tsy-118927	Tarsius syrichta	64.71	2.00e-162	565.00
IUUC-Tni-120832	Tetraodon nigroviridis	58.99	0.00e+00	647.00
IUUC-Tca-121584	Theobroma cacao	42.61	5.00e-88	318.00
IUUC-Tre-122140	Trichoderma reesei	40.85	1.00e-40	160.00
IUUC-Tvi-122663	Trichoderma virens	41.31	1.00e-40	161.00
IUUC-Tae-124502	Triticum aestivum	40.84	1.00e-83	303.00
IUUC-Tur-126239	Triticum urartu	40.84	5.00e-84	305.00
IUUC-Tme-127108	Tuber melanosporum	39.43	2.00e-79	290.00
IUUC-Ttr-129010	Tursiops truncatus	73.08	0.00e+00	809.00
IUUC-Vda-129825	Verticillium dahliae	41.04	6.00e-41	162.00
IUUC-Vpa-130374	Vicugna pacos	73.76	9.00e-93	333.00
IUUC-Vvi-131136	Vitis vinifera	40.39	4.00e-84	305.00
IUUC-Xtr-132141	Xenopus tropicalis	72.41	0.00e+00	714.00
IUUC-Xma-133980	Xiphophorus maculatus	65.11	0.00e+00	656.00
IUUC-Yli-134457	Yarrowia lipolytica	37.95	5.00e-37	149.00
IUUC-Zma-135321	Zea mays	42.12	4.00e-85	308.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence