iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135321

Ensembl Protein ID

Zm00001d035023_T001

UniProt Accession

B4FIA4; B4FIA4_MAIZE

Genbank Protein ID

ACF81847.1; ACG33535.1; AQK78103.1

Protein Name

Chromatin assembly factor 1 subunit B; Chromatin assembly factor 1 subunit FAS2

Genbank Nucleotide ID

BT036842; EU961417; CM000782

Gene Name

ZEAMMB73_Zm00001d035023

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d035023	Zm00001d035023_T001	Zm00001d035023_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-24	86.2	113	145

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
             +v +l++ +d t+lvs+s D+t+ +W+ ++g
   Q: 113  HKDVLDLQWsHDsTFLVSASVDNTCIIWEASKG 145
           4459******778***************96655 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MRGGTLQINW HDQQPVLSLD FHPVSRRLAT AGADHDVKIW EVASDGKLPT ATFKTGLVPN 60
TTAHSSAVNV LRFSPSGEYL ASGADGGGIT LWKLHPADDG EAWKIHKTLL FHHKDVLDLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGAAAACTT ACAAGGGCGC GGCAACAGAG CGAGAGGCGC GCGCGCAGTC CCCTCTACTT 60
CCCGCCGCTG GCCGTTTCCC TTCCCCCCAA TCCAAACCCT AGAGAGAGAG AGAGAGAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR001632--Gprotein_B
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB

SMART

SM00320--WD40

Gene Ontology

GO:0033186--C:CAF-1 complex
GO:0008283--P:cell proliferation
GO:0000724--P:double-strand break repair via homologous recombination
GO:0031507--P:heterochromatin assembly
GO:0048366--P:leaf development
GO:0009933--P:meristem structural organization
GO:0006334--P:nucleosome assembly
GO:0009555--P:pollen development
GO:0010026--P:trichome differentiation

KEGG

zma:100194325

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000474	Aegilops tauschii	73.28	0.00e+00	746.00
IUUC-Aml-001755	Ailuropoda melanoleuca	41.67	2.00e-83	302.00
IUUC-Atr-002674	Amborella trichopoda	56.53	1.00e-158	552.00
IUUC-Apl-003701	Anas platyrhynchos	41.48	2.00e-83	302.00
IUUC-Aca-004692	Anolis carolinensis	41.98	4.00e-85	308.00
IUUC-Aly-006286	Arabidopsis lyrata	55.75	2.00e-161	561.00
IUUC-Ath-007683	Arabidopsis thaliana	54.56	2.00e-159	555.00
IUUC-Ago-007940	Ashbya gossypii	34.47	2.00e-63	236.00
IUUC-Afl-008414	Aspergillus flavus	40.40	6.00e-39	155.00
IUUC-Ani-009399	Aspergillus nidulans	40.40	5.00e-38	152.00
IUUC-Aor-009937	Aspergillus oryzae	40.40	7.00e-39	155.00
IUUC-Ame-011094	Astyanax mexicanus	40.89	1.00e-87	316.00
IUUC-Bta-013423	Bos taurus	41.61	2.00e-84	305.00
IUUC-Bdi-014860	Brachypodium distachyon	73.52	0.00e+00	729.00
IUUC-Bol-016603	Brassica oleracea	53.14	2.00e-154	538.00
IUUC-Bra-017175	Brassica rapa	54.78	5.00e-153	533.00
IUUC-Cel-018272	Caenorhabditis elegans	31.33	4.00e-39	155.00
IUUC-Cja-019558	Callithrix jacchus	42.14	2.00e-84	305.00
IUUC-Cfa-020900	Canis familiaris	41.06	5.00e-82	298.00
IUUC-Cpo-022054	Cavia porcellus	40.56	5.00e-73	268.00
IUUC-Csa-023850	Chlorocebus sabaeus	42.46	9.00e-86	310.00
IUUC-Cho-024510	Choloepus hoffmanni	34.75	1.00e-41	163.00
IUUC-Cin-025178	Ciona intestinalis	37.81	2.00e-75	276.00
IUUC-Cme-027136	Cyanidioschyzon merolae	31.49	9.00e-60	224.00
IUUC-Dre-027879	Danio rerio	40.74	3.00e-86	312.00
IUUC-Dno-029335	Dasypus novemcinctus	41.98	8.00e-86	310.00
IUUC-Dor-030520	Dipodomys ordii	32.66	9.00e-54	204.00
IUUC-Dme-031838	Drosophila melanogaster	39.75	1.00e-76	280.00
IUUC-Eca-033563	Equus caballus	36.60	2.00e-86	312.00
IUUC-Fca-036052	Felis catus	42.22	4.00e-85	308.00
IUUC-Fal-037080	Ficedula albicollis	42.47	2.00e-86	312.00
IUUC-Gmo-039461	Gadus morhua	40.94	4.00e-68	251.00
IUUC-Gga-041133	Gallus gallus	41.98	1.00e-85	310.00
IUUC-Gac-041769	Gasterosteus aculeatus	41.83	1.00e-86	313.00
IUUC-Gma-043339	Glycine max	63.75	5.00e-151	527.00
IUUC-Ggo-044561	Gorilla gorilla	42.21	3.00e-86	311.00
IUUC-Hsa-046150	Homo sapiens	42.71	2.00e-86	312.00
IUUC-Hvu-047792	Hordeum vulgare	79.27	2.00e-129	454.00
IUUC-Itr-048630	Ictidomys tridecemlineatus	43.21	2.00e-86	312.00
IUUC-Kpa-049397	Komagataella pastoris	38.07	4.00e-68	251.00
IUUC-Lch-050365	Latimeria chalumnae	33.91	2.00e-54	206.00
IUUC-Lpe-050875	Leersia perrieri	72.94	0.00e+00	756.00
IUUC-Loc-052770	Lepisosteus oculatus	41.34	5.00e-87	314.00
IUUC-Laf-053505	Loxodonta africana	42.96	3.00e-86	311.00
IUUC-Mcc-054803	Macaca mulatta	42.46	8.00e-86	310.00
IUUC-Meu-056578	Macropus eugenii	43.59	4.00e-38	152.00
IUUC-Mtr-058066	Medicago truncatula	59.31	2.00e-151	528.00
IUUC-Mga-059735	Meleagris gallopavo	41.98	3.00e-85	308.00
IUUC-Mmr-061343	Microcebus murinus	42.46	4.00e-86	311.00
IUUC-Mdo-062065	Monodelphis domestica	42.29	9.00e-86	310.00
IUUC-Mmu-063501	Mus musculus	42.51	2.00e-83	302.00
IUUC-Mac-064864	Musa acuminata	64.41	1.00e-162	565.00
IUUC-Mpu-066549	Mustela putorius furo	42.36	3.00e-87	315.00
IUUC-Mlu-067121	Myotis lucifugus	42.79	7.00e-87	314.00
IUUC-Nfi-068462	Neosartorya fischeri	40.40	1.00e-38	154.00
IUUC-Nle-069854	Nomascus leucogenys	42.71	4.00e-86	311.00
IUUC-Opr-070803	Ochotona princeps	39.20	2.00e-73	269.00
IUUC-Ont-071642	Oreochromis niloticus	40.87	2.00e-86	312.00
IUUC-Oan-073675	Ornithorhynchus anatinus	42.82	2.00e-88	319.00
IUUC-Ocu-073863	Oryctolagus cuniculus	42.17	3.00e-83	301.00
IUUC-Oba-075682	Oryza barthii	73.19	0.00e+00	731.00
IUUC-Obr-076039	Oryza brachyantha	72.80	0.00e+00	734.00
IUUC-Ogu-078021	Oryza glumaepatula	74.56	0.00e+00	752.00
IUUC-Oin-079908	Oryza indica	62.10	3.00e-175	607.00
IUUC-Olo-081063	Oryza longistaminata	74.36	0.00e+00	750.00
IUUC-Ome-081930	Oryza meridionalis	74.76	0.00e+00	754.00
IUUC-Oni-082547	Oryza nivara	74.36	0.00e+00	749.00
IUUC-Opu-084089	Oryza punctata	73.79	0.00e+00	740.00
IUUC-Oru-084844	Oryza rufipogon	74.56	0.00e+00	751.00
IUUC-Osa-085582	Oryza sativa	74.56	0.00e+00	751.00
IUUC-Ola-087187	Oryzias latipes	41.20	3.00e-87	315.00
IUUC-Olu-087792	Ostreococcus lucimarinus	40.60	1.00e-77	282.00
IUUC-Oga-088390	Otolemur garnettii	41.96	6.00e-85	307.00
IUUC-Oar-089740	Ovis aries	40.94	6.00e-80	291.00
IUUC-Ptr-091581	Pan troglodytes	42.71	2.00e-86	312.00
IUUC-Pan-092258	Papio anubis	38.52	7.00e-74	271.00
IUUC-Psi-093761	Pelodiscus sinensis	37.24	3.00e-85	308.00
IUUC-Ppa-095428	Physcomitrella patens	54.31	3.00e-119	422.00
IUUC-Pfo-097357	Poecilia formosa	41.35	2.00e-88	319.00
IUUC-Pab-098520	Pongo abelii	42.71	6.00e-86	311.00
IUUC-Pop-099331	Populus trichocarpa	55.66	6.00e-159	553.00
IUUC-Ppe-101548	Prunus persica	52.67	9.00e-160	556.00
IUUC-Pva-103243	Pteropus vampyrus	42.13	6.00e-77	281.00
IUUC-Rno-105202	Rattus norvegicus	41.65	1.00e-84	306.00
IUUC-Sce-106250	Saccharomyces cerevisiae	34.18	3.00e-62	231.00
IUUC-Sha-107036	Sarcophilus harrisii	41.29	6.00e-85	307.00
IUUC-Sja-107912	Schizosaccharomyces japonicus	35.31	1.00e-68	253.00
IUUC-Spo-108050	Schizosaccharomyces pombe	33.91	9.00e-65	240.00
IUUC-Ssl-108607	Sclerotinia sclerotiorum	39.80	4.00e-36	145.00
IUUC-Sit-109838	Setaria italica	85.27	0.00e+00	887.00
IUUC-Sly-110872	Solanum lycopersicum	58.26	5.00e-151	526.00
IUUC-Stu-111933	Solanum tuberosum	56.95	5.00e-149	520.00
IUUC-Sbi-114587	Sorghum bicolor	91.75	0.00e+00	939.00
IUUC-Ssc-115462	Sus scrofa	42.75	2.00e-85	309.00
IUUC-Tgu-117186	Taeniopygia guttata	41.11	1.00e-85	310.00
IUUC-Tru-118310	Takifugu rubripes	38.54	5.00e-87	314.00
IUUC-Tsy-118927	Tarsius syrichta	38.35	1.00e-50	193.00
IUUC-Tni-120832	Tetraodon nigroviridis	39.36	7.00e-87	314.00
IUUC-Tca-121584	Theobroma cacao	57.73	1.00e-165	575.00
IUUC-Tae-124063	Triticum aestivum	73.28	0.00e+00	745.00
IUUC-Tur-126239	Triticum urartu	73.08	0.00e+00	744.00
IUUC-Tme-127108	Tuber melanosporum	36.38	2.00e-67	249.00
IUUC-Ttr-129010	Tursiops truncatus	43.43	7.00e-86	310.00
IUUC-Vda-129825	Verticillium dahliae	38.89	3.00e-35	143.00
IUUC-Vpa-130374	Vicugna pacos	42.33	3.00e-27	115.00
IUUC-Vvi-131136	Vitis vinifera	63.37	1.00e-155	542.00
IUUC-Xtr-132141	Xenopus tropicalis	41.58	4.00e-88	318.00
IUUC-Xma-133980	Xiphophorus maculatus	40.62	1.00e-86	313.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence