iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099868

UUCD1 version

UUC-PoT-00924

Ensembl Protein ID

POPTR_0010s11060.1

UniProt Accession

A9P8P9; A9P8P9_POPTR

Genbank Protein ID

ABK92752.1; ABK93029.1; EEF02007.1

Protein Name

Transport protein SEC13

Genbank Nucleotide ID

EF144511; EF144815; CM000346

Gene Name

POPTRDRAFT_822036; POPTR_0010s11060g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s11060	POPTR_0010s11060.1	POPTR_0010s11060.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-30	103.9	53	85

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd..tllvsGsdDgtikvWD 29
           gH+++v+ +a+  +    ll+s+s+Dg + +W 
   Q: 53   GHQGPVWQVAWahPKfgSLLASCSYDGRVIIWK 85
           8***********9444478*************7 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MPSQKIETGH EDTVHDVAMD YYGKRIATAS SDHSIKIVGV NNNSSQHLAN LTGHQGPVWQ 60
VAWAHPKFGS LLASCSYDGR VIIWKEGNQN DWIQAHVFDD HKSSVNSIAW APHELGLCLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTAACGAAC GAAGGGTAAA TTTGATCGAA TGCTTTTTAT AGGGTCTGAA GTAGTTCAGA 60
TACTGAGACA GACAGAGATG CAACCAAGCC TGAAAGCCGA AACATATTTC GATCTTTTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0010s11060g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cne-027054	Cryptococcus neoformans	44.51	7.00e-63	233.00
IUUC-Eeu-035119	Erinaceus europaeus	40.45	2.00e-15	75.90
IUUC-Ggr-039865	Gaeumannomyces graminis	48.21	3.00e-73	267.00
IUUC-Gac-041337	Gasterosteus aculeatus	29.97	2.00e-32	132.00
IUUC-Lpe-051187	Leersia perrieri	80.00	4.00e-151	529.00
IUUC-Lma-053250	Leptosphaeria maculans	47.99	8.00e-69	253.00
IUUC-Mtr-058412	Medicago truncatula	88.00	3.00e-159	553.00
IUUC-Mac-065307	Musa acuminata	86.01	4.00e-151	526.00
IUUC-Opu-083677	Oryza punctata	80.92	8.00e-147	512.00
IUUC-Ppe-101707	Prunus persica	88.00	7.00e-162	562.00
IUUC-Smo-108797	Selaginella moellendorffii	71.24	4.00e-128	450.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence