iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-134932

Ensembl Protein ID

Zm00001d019287_T001

UniProt Accession

A0A1D6HWM8; A0A1D6HWM8_MAIZE

Genbank Protein ID

ONM52629.1

Protein Name

Protein transport protein SEC13 homolog B

Genbank Nucleotide ID

CM007650

Gene Name

ZEAMMB73_Zm00001d019287

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d019287	Zm00001d019287_T001	Zm00001d019287_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-18	68.2	236	268

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf......sdtllvsGsdDgtikvW 28
           Htd v+++a+      s  +++sGs Dg++ +W
   Q: 236  HTDCVRDVAWapvlglSKSTIASGSQDGKVVIW 268
           ***********999974468************* PP

Organism

Zea mays

Protein Sequence
(Fasta)

MGLLDGCSML RIEIGEETCE RGSIIVQFGN MSSKKIELDH KDMVHDSAID YYGKRLATAS 60
SDFTVKIVNI GAANAPSQVL ATLSGHYGPV WRVAWAHPKY GAILASCSYD GRVIIWKEDA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGCTGT TGGATGGCTG CTCAATGCTC CGGATTGAAA TCGGTGAAGA GGTAAGATGG 60
GTTGATGGCT TGCTCTGTAG CTTTCTAAAT GGAAGTCTGA GTGACTGAAT AGAGCTAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014445	Brachypodium distachyon	82.06	6.00e-144	502.00
IUUC-Gac-041337	Gasterosteus aculeatus	28.44	3.00e-31	128.00
IUUC-Oba-075365	Oryza barthii	85.71	6.00e-151	526.00
IUUC-Ogl-077855	Oryza glaberrima	85.71	6.00e-151	526.00
IUUC-Ogu-078216	Oryza glumaepatula	86.05	4.00e-151	526.00
IUUC-Oin-079940	Oryza indica	86.05	4.00e-151	526.00
IUUC-Ome-081141	Oryza meridionalis	86.05	4.00e-151	526.00
IUUC-Oni-082228	Oryza nivara	86.05	4.00e-151	526.00
IUUC-Oru-084940	Oryza rufipogon	86.05	4.00e-151	526.00
IUUC-Sit-109927	Setaria italica	91.03	2.00e-160	557.00
IUUC-Sbi-114563	Sorghum bicolor	94.98	6.00e-166	575.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence