iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-134821

Ensembl Protein ID

Zm00001d028050_T001

UniProt Accession

A0A1D6JRL3; A0A1D6JRL3_MAIZE

Genbank Protein ID

ONL94579.1

Protein Name

Retinoblastoma-binding protein-like

Genbank Nucleotide ID

CM007647

Gene Name

ZEAMMB73_Zm00001d028050

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d028050	Zm00001d028050_T001	Zm00001d028050_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-15	57.9	22	54

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H + + c+af    tll++G+ +g++ +WD+ t
   Q: 22   HHGTMKCIAFnRKgTLLAAGCSNGSCIIWDFET 54
           778899****9445****************876 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MNVPVVDPYQ GEFPETIEEY LHHGTMKCIA FNRKGTLLAA GCSNGSCIIW DFETRGLAKE 60
FRDKDSTAPI TSVSWSRYGH RLLASATDKS LTLWDVPTGE KIARITLQQT PLRASLQPGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCTCACCG CCGCGGCCAC CTGCGTCCGC CCGTCCCGAC CTCCGTCCTC CGCCTCCGGC 60
ACCGTCGCGG CCCCCTGAAC GCAGTCCGAT TCCAGCCTCC GCCAGCCCGC CCACCAGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000616	Aegilops tauschii	75.68	0.00e+00	794.00
IUUC-Aml-002118	Ailuropoda melanoleuca	32.06	3.00e-56	212.00
IUUC-Atr-002777	Amborella trichopoda	59.89	1.00e-172	598.00
IUUC-Apl-004056	Anas platyrhynchos	33.83	1.00e-55	210.00
IUUC-Aca-004999	Anolis carolinensis	34.80	9.00e-56	211.00
IUUC-Aly-006092	Arabidopsis lyrata	58.55	5.00e-161	560.00
IUUC-Ath-006947	Arabidopsis thaliana	56.79	7.00e-160	556.00
IUUC-Ago-007753	Ashbya gossypii	28.05	1.00e-29	123.00
IUUC-Acl-008105	Aspergillus clavatus	31.79	8.00e-42	164.00
IUUC-Afl-008633	Aspergillus flavus	31.45	2.00e-39	155.00
IUUC-Afu-009075	Aspergillus fumigatus	33.74	8.00e-20	90.90
IUUC-Ani-009233	Aspergillus nidulans	31.22	1.00e-43	170.00
IUUC-Ang-009695	Aspergillus niger	32.12	1.00e-42	166.00
IUUC-Aor-009988	Aspergillus oryzae	31.45	2.00e-39	155.00
IUUC-Ate-010313	Aspergillus terreus	31.09	1.00e-40	160.00
IUUC-Ame-011134	Astyanax mexicanus	28.10	6.00e-41	161.00
IUUC-Bgr-012302	Blumeria graminis	32.52	1.00e-39	157.00
IUUC-Bta-012946	Bos taurus	32.01	8.00e-58	217.00
IUUC-Bci-013968	Botrytis cinerea	31.93	1.00e-43	170.00
IUUC-Bdi-014387	Brachypodium distachyon	77.78	0.00e+00	786.00
IUUC-Bra-017414	Brassica rapa	57.59	8.00e-163	566.00
IUUC-Cel-018610	Caenorhabditis elegans	29.95	1.00e-47	183.00
IUUC-Cja-019938	Callithrix jacchus	32.06	2.00e-56	213.00
IUUC-Cfa-020726	Canis familiaris	31.83	2.00e-57	216.00
IUUC-Cpo-021560	Cavia porcellus	33.43	3.00e-47	181.00
IUUC-Cre-022588	Chlamydomonas reinhardtii	52.29	6.00e-24	104.00
IUUC-Csa-024192	Chlorocebus sabaeus	32.01	8.00e-58	217.00
IUUC-Cho-024355	Choloepus hoffmanni	33.96	4.00e-57	215.00
IUUC-Cin-025285	Ciona intestinalis	34.55	3.00e-59	222.00
IUUC-Csv-026366	Ciona savignyi	33.68	1.00e-57	216.00
IUUC-Cgl-026450	Colletotrichum gloeosporioides	29.21	3.00e-40	158.00
IUUC-Cne-027092	Cryptococcus neoformans	26.72	4.00e-39	155.00
IUUC-Cme-027137	Cyanidioschyzon merolae	27.11	2.00e-28	119.00
IUUC-Dre-027374	Danio rerio	34.38	3.00e-57	215.00
IUUC-Dno-030003	Dasypus novemcinctus	32.40	8.00e-54	204.00
IUUC-Dor-030355	Dipodomys ordii	32.01	2.00e-57	216.00
IUUC-Dse-031442	Dothistroma septosporum	30.43	4.00e-41	161.00
IUUC-Dme-031932	Drosophila melanogaster	36.54	2.00e-64	239.00
IUUC-Ete-032858	Echinops telfairi	33.77	3.00e-36	145.00
IUUC-Eca-034217	Equus caballus	31.83	2.00e-57	216.00
IUUC-Eeu-035024	Erinaceus europaeus	35.44	1.00e-55	209.00
IUUC-Fca-035370	Felis catus	32.06	1.00e-56	213.00
IUUC-Fal-036628	Ficedula albicollis	34.58	1.00e-54	207.00
IUUC-Fox-037739	Fusarium oxysporum	30.84	7.00e-43	167.00
IUUC-Fso-038094	Fusarium solani	31.12	3.00e-44	172.00
IUUC-Gmo-039088	Gadus morhua	31.73	8.00e-55	207.00
IUUC-Ggr-040063	Gaeumannomyces graminis	30.22	2.00e-44	172.00
IUUC-Gga-041160	Gallus gallus	33.75	7.00e-57	214.00
IUUC-Gac-041333	Gasterosteus aculeatus	34.80	4.00e-55	208.00
IUUC-Gma-043909	Glycine max	62.12	3.00e-176	610.00
IUUC-Ggo-044657	Gorilla gorilla	32.01	8.00e-58	217.00
IUUC-Hsa-045894	Homo sapiens	32.01	8.00e-58	217.00
IUUC-Hvu-047662	Hordeum vulgare	75.89	0.00e+00	814.00
IUUC-Itr-048125	Ictidomys tridecemlineatus	32.41	6.00e-55	207.00
IUUC-Kpa-049095	Komagataella pastoris	29.06	3.00e-32	132.00
IUUC-Lch-049495	Latimeria chalumnae	40.24	1.00e-21	97.40
IUUC-Lpe-051038	Leersia perrieri	76.76	0.00e+00	815.00
IUUC-Loc-052680	Lepisosteus oculatus	32.30	4.00e-59	221.00
IUUC-Laf-053717	Loxodonta africana	32.61	3.00e-56	212.00
IUUC-Mcc-055007	Macaca mulatta	32.66	3.00e-55	209.00
IUUC-Meu-056494	Macropus eugenii	41.07	5.00e-16	78.60
IUUC-Mor-057173	Magnaporthe oryzae	31.50	7.00e-43	167.00
IUUC-Mpo-057622	Magnaporthe poae	29.95	1.00e-44	173.00
IUUC-Mtr-058687	Medicago truncatula	58.51	0.00e+00	628.00
IUUC-Mla-059057	Melampsora laricipopulina	26.93	1.00e-29	124.00
IUUC-Mga-060037	Meleagris gallopavo	33.68	4.00e-54	205.00
IUUC-Mvi-060321	Microbotryum violaceum	29.10	6.00e-40	158.00
IUUC-Mmr-060755	Microcebus murinus	32.61	2.00e-56	213.00
IUUC-Mdo-061859	Monodelphis domestica	33.75	9.00e-57	214.00
IUUC-Mmu-063755	Mus musculus	32.18	5.00e-58	218.00
IUUC-Mac-065292	Musa acuminata	66.37	0.00e+00	725.00
IUUC-Mpu-065896	Mustela putorius furo	32.11	2.00e-57	216.00
IUUC-Mlu-067927	Myotis lucifugus	32.06	2.00e-56	213.00
IUUC-Nfi-068429	Neosartorya fischeri	31.55	1.00e-40	160.00
IUUC-Ncr-068738	Neurospora crassa	32.20	7.00e-45	174.00
IUUC-Nle-069608	Nomascus leucogenys	32.01	8.00e-58	217.00
IUUC-Opr-070319	Ochotona princeps	32.43	1.00e-55	210.00
IUUC-Ont-071451	Oreochromis niloticus	32.31	4.00e-58	218.00
IUUC-Oan-073445	Ornithorhynchus anatinus	34.35	4.00e-54	204.00
IUUC-Ocu-074341	Oryctolagus cuniculus	32.01	1.00e-57	217.00
IUUC-Oba-075664	Oryza barthii	77.89	0.00e+00	868.00
IUUC-Obr-076630	Oryza brachyantha	77.64	0.00e+00	832.00
IUUC-Ogl-077847	Oryza glaberrima	77.62	0.00e+00	864.00
IUUC-Ogu-077970	Oryza glumaepatula	77.80	0.00e+00	825.00
IUUC-Oin-079374	Oryza indica	77.89	0.00e+00	867.00
IUUC-Olo-080992	Oryza longistaminata	77.89	0.00e+00	870.00
IUUC-Ome-081683	Oryza meridionalis	78.17	0.00e+00	826.00
IUUC-Oni-082594	Oryza nivara	77.89	0.00e+00	867.00
IUUC-Opu-083907	Oryza punctata	78.52	0.00e+00	889.00
IUUC-Oru-084400	Oryza rufipogon	77.89	0.00e+00	868.00
IUUC-Osa-085442	Oryza sativa	77.89	0.00e+00	868.00
IUUC-Ola-086569	Oryzias latipes	33.33	2.00e-57	216.00
IUUC-Oga-088947	Otolemur garnettii	31.40	1.00e-52	200.00
IUUC-Oar-090358	Ovis aries	31.88	3.00e-56	212.00
IUUC-Ptr-091601	Pan troglodytes	32.01	1.00e-57	217.00
IUUC-Pan-092466	Papio anubis	32.01	8.00e-58	217.00
IUUC-Psi-093614	Pelodiscus sinensis	33.83	1.00e-55	209.00
IUUC-Pma-094450	Petromyzon marinus	35.75	1.00e-53	204.00
IUUC-Pno-094819	Phaeosphaeria nodorum	29.73	4.00e-37	148.00
IUUC-Ppa-095157	Physcomitrella patens	58.60	1.00e-69	256.00
IUUC-Pfo-096312	Poecilia formosa	34.17	1.00e-57	217.00
IUUC-Pab-098058	Pongo abelii	32.01	8.00e-58	217.00
IUUC-Pop-099039	Populus trichocarpa	61.39	0.00e+00	632.00
IUUC-Pca-100623	Procavia capensis	35.44	2.00e-55	209.00
IUUC-Ppe-102053	Prunus persica	62.69	0.00e+00	641.00
IUUC-Pva-102779	Pteropus vampyrus	34.94	6.00e-54	204.00
IUUC-Pgr-103398	Puccinia graminis	28.64	3.00e-35	142.00
IUUC-Ptt-103912	Puccinia triticina	29.93	1.00e-36	147.00
IUUC-Pte-104246	Pyrenophora teres	30.96	1.00e-39	156.00
IUUC-Pyt-104582	Pyrenophora triticirepentis	28.68	2.00e-39	156.00
IUUC-Rno-104838	Rattus norvegicus	32.01	1.00e-57	216.00
IUUC-Sce-106229	Saccharomyces cerevisiae	29.06	3.00e-29	122.00
IUUC-Sha-106527	Sarcophilus harrisii	33.75	1.00e-56	214.00
IUUC-Sja-107862	Schizosaccharomyces japonicus	31.50	1.00e-43	169.00
IUUC-Spo-108025	Schizosaccharomyces pombe	32.85	2.00e-43	169.00
IUUC-Ssl-108544	Sclerotinia sclerotiorum	31.70	7.00e-43	167.00
IUUC-Smo-109474	Selaginella moellendorffii	47.61	2.00e-112	399.00
IUUC-Sit-110687	Setaria italica	90.43	0.00e+00	929.00
IUUC-Sly-111597	Solanum lycopersicum	60.45	5.00e-173	600.00
IUUC-Stu-112389	Solanum tuberosum	60.71	2.00e-176	611.00
IUUC-Sar-113284	Sorex araneus	36.12	4.00e-33	135.00
IUUC-Sbi-114362	Sorghum bicolor	95.95	0.00e+00	989.00
IUUC-Sre-115146	Sporisorium reilianum	23.95	5.00e-30	125.00
IUUC-Ssc-115604	Sus scrofa	32.06	1.00e-56	213.00
IUUC-Tru-118258	Takifugu rubripes	34.38	1.00e-57	216.00
IUUC-Tsy-119169	Tarsius syrichta	34.40	1.00e-46	180.00
IUUC-Tni-119939	Tetraodon nigroviridis	34.38	6.00e-57	214.00
IUUC-Tca-121010	Theobroma cacao	60.04	0.00e+00	636.00
IUUC-Tre-121944	Trichoderma reesei	32.54	1.00e-43	170.00
IUUC-Tvi-122283	Trichoderma virens	32.94	5.00e-46	178.00
IUUC-Tur-126395	Triticum urartu	75.45	0.00e+00	814.00
IUUC-Tme-127150	Tuber melanosporum	31.41	6.00e-44	171.00
IUUC-Tbe-127745	Tupaia belangeri	33.49	2.00e-27	116.00
IUUC-Ttr-129187	Tursiops truncatus	35.44	2.00e-55	209.00
IUUC-Uma-129654	Ustilago maydis	25.28	4.00e-29	122.00
IUUC-Vda-129788	Verticillium dahliae	30.65	2.00e-44	172.00
IUUC-Vpa-130182	Vicugna pacos	33.25	7.00e-42	164.00
IUUC-Vvi-131557	Vitis vinifera	62.34	0.00e+00	662.00
IUUC-Xtr-132007	Xenopus tropicalis	34.52	6.00e-58	218.00
IUUC-Xma-133909	Xiphophorus maculatus	34.38	2.00e-57	216.00
IUUC-Yli-134524	Yarrowia lipolytica	29.97	3.00e-41	162.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence