iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cfa-020625

Ensembl Protein ID

ENSCAFP00000016519.4

UniProt Accession

F6XA80; F6XA80_CANLF

Genbank Protein ID

ENSCAFP00000016519

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAEX03002681

Gene Name

LYST

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCAFG00000011231.4	ENSCAFT00000017844.4	ENSCAFP00000016519.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.70e-07	30.0	3596	3628

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlr 31
           gHt+++t+l f   +  +++s s+Dgt+ +WDl 
   Q: 3596 GHTEEITSL-FvckPYSIMISVSRDGTCIIWDLN 3628
           8********.998755789*************85 PP

Organism

Canis familiaris

Protein Sequence
(Fasta)

MSIDSNSLAR EFLTDVNRLC NAVVQRVEAR EEEEEETHMA TLGQYLVHGR GFLLLTKLNS 60
IIDQALTCRE ELLTLLLSLL PLVWKIPVQE EKATDFNLPF SADIILTKEK NSSSQRSTQE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCAGCGCGC ACGCGCAGGC GAGCGGGACT GGGTCAGGAC CGGGGAAGGG CGGGGGTGGT 60
GTTCCCGGTT TCCTGGGTTA CCTGAGGGGG CGGGGGTGGG GAGTTCGCGG CGGCGACGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR030464--LYST
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Gene Ontology

GO:0015630--C:microtubule cytoskeleton
GO:0032510--P:endosome to lysosome transport via multivesicular body sorting pathway
GO:0007040--P:lysosome organization
GO:0042267--P:natural killer cell mediated cytotoxicity
GO:0043473--P:pigmentation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002188	Ailuropoda melanoleuca	94.54	0.00e+00	7243.00
IUUC-Apl-003779	Anas platyrhynchos	72.01	0.00e+00	5358.00
IUUC-Ame-010834	Astyanax mexicanus	63.80	0.00e+00	3429.00
IUUC-Bta-013274	Bos taurus	89.90	0.00e+00	6845.00
IUUC-Cja-019682	Callithrix jacchus	90.06	0.00e+00	6848.00
IUUC-Cpo-022515	Cavia porcellus	83.63	0.00e+00	6297.00
IUUC-Csa-023804	Chlorocebus sabaeus	89.83	0.00e+00	6827.00
IUUC-Cin-025176	Ciona intestinalis	45.01	3.00e-85	308.00
IUUC-Csv-026108	Ciona savignyi	53.57	0.00e+00	713.00
IUUC-Dre-027544	Danio rerio	62.39	0.00e+00	3283.00
IUUC-Dno-029030	Dasypus novemcinctus	86.65	0.00e+00	6624.00
IUUC-Dor-031065	Dipodomys ordii	79.90	0.00e+00	2830.00
IUUC-Eca-034391	Equus caballus	90.32	0.00e+00	6857.00
IUUC-Fal-037194	Ficedula albicollis	71.38	0.00e+00	5286.00
IUUC-Gmo-039256	Gadus morhua	73.51	0.00e+00	2256.00
IUUC-Gga-040318	Gallus gallus	71.90	0.00e+00	5313.00
IUUC-Gac-042425	Gasterosteus aculeatus	60.58	0.00e+00	4341.00
IUUC-Ggo-045550	Gorilla gorilla	89.78	0.00e+00	6828.00
IUUC-Hsa-046612	Homo sapiens	90.32	0.00e+00	6881.00
IUUC-Laf-054133	Loxodonta africana	88.07	0.00e+00	6646.00
IUUC-Mcc-055373	Macaca mulatta	90.09	0.00e+00	6865.00
IUUC-Mga-059475	Meleagris gallopavo	70.14	0.00e+00	5147.00
IUUC-Mmr-061795	Microcebus murinus	90.08	0.00e+00	6798.00
IUUC-Mlu-067930	Myotis lucifugus	84.38	0.00e+00	3737.00
IUUC-Nle-069205	Nomascus leucogenys	89.22	0.00e+00	6735.00
IUUC-Ont-071764	Oreochromis niloticus	61.31	0.00e+00	4339.00
IUUC-Ocu-074479	Oryctolagus cuniculus	87.54	0.00e+00	6659.00
IUUC-Ptr-091393	Pan troglodytes	90.27	0.00e+00	6877.00
IUUC-Pan-092369	Papio anubis	89.99	0.00e+00	6832.00
IUUC-Pfo-096100	Poecilia formosa	60.57	0.00e+00	4320.00
IUUC-Pab-098733	Pongo abelii	89.14	0.00e+00	6735.00
IUUC-Pca-100429	Procavia capensis	76.01	0.00e+00	2445.00
IUUC-Sha-106595	Sarcophilus harrisii	73.36	0.00e+00	5320.00
IUUC-Sar-113059	Sorex araneus	77.43	0.00e+00	1805.00
IUUC-Ssc-115879	Sus scrofa	83.48	0.00e+00	6128.00
IUUC-Tru-118616	Takifugu rubripes	60.13	0.00e+00	4316.00
IUUC-Tsy-119568	Tarsius syrichta	82.71	0.00e+00	5331.00
IUUC-Tni-120782	Tetraodon nigroviridis	59.82	0.00e+00	4287.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence