iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000013171.1	ENSSHAT00000015579.1	ENSSHAP00000015452.1
ENSSHAG00000013171.1	ENSSHAT00000015580.1	ENSSHAP00000015453.1
ENSSHAG00000013171.1	ENSSHAT00000015581.1	ENSSHAP00000015454.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-06	27.9	3606	3638

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlr 31
           gHt+++t+l f   +  +++s s Dgt+ +WDl 
   Q: 3606 GHTEEITSL-FvckPYSIMISVSKDGTCIIWDLN 3638
           8********.998755789*************85 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MSSDSNSLAR EFLTDVNRLC NAVVQRAESK EEEEEETHMA ALGQYLVQGR GFILLTKLNI 60
LIDQALTCRE ELLTLLLSLL PLVWKIPVQE EKAIDFNLPF SADIIWTKET NSSSLRYTQE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGAAGACTC AGTCCAAGAA TAATTCTTTA TTTCTTTACC TAAGGAGTTC ATTAAAAAAA 60
AAAAAAAAAG AATATAAATG TTACTGAAGT GTTGAAAATA CCGGTAAGTA TTTCATAATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR030464--LYST
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Gene Ontology

GO:0015630--C:microtubule cytoskeleton
GO:0032510--P:endosome to lysosome transport via multivesicular body sorting pathway
GO:0007040--P:lysosome organization
GO:0042267--P:natural killer cell mediated cytotoxicity
GO:0043473--P:pigmentation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002188	Ailuropoda melanoleuca	73.20	0.00e+00	5512.00
IUUC-Apl-003779	Anas platyrhynchos	68.83	0.00e+00	5009.00
IUUC-Ame-010834	Astyanax mexicanus	57.72	0.00e+00	4078.00
IUUC-Bta-013274	Bos taurus	73.16	0.00e+00	5442.00
IUUC-Cja-019682	Callithrix jacchus	73.83	0.00e+00	5517.00
IUUC-Cfa-020625	Canis familiaris	73.36	0.00e+00	5392.00
IUUC-Cpo-022515	Cavia porcellus	69.32	0.00e+00	5051.00
IUUC-Csa-023804	Chlorocebus sabaeus	73.56	0.00e+00	5458.00
IUUC-Cin-025176	Ciona intestinalis	45.25	8.00e-86	310.00
IUUC-Csv-026108	Ciona savignyi	53.42	0.00e+00	709.00
IUUC-Dre-027544	Danio rerio	57.25	0.00e+00	2925.00
IUUC-Dno-029030	Dasypus novemcinctus	71.96	0.00e+00	5342.00
IUUC-Dor-031065	Dipodomys ordii	85.83	0.00e+00	1549.00
IUUC-Eca-034391	Equus caballus	73.09	0.00e+00	5450.00
IUUC-Fal-037194	Ficedula albicollis	68.48	0.00e+00	4981.00
IUUC-Gmo-039256	Gadus morhua	66.08	0.00e+00	1930.00
IUUC-Gga-040318	Gallus gallus	68.77	0.00e+00	4990.00
IUUC-Gac-042425	Gasterosteus aculeatus	59.45	0.00e+00	3108.00
IUUC-Ggo-045550	Gorilla gorilla	73.22	0.00e+00	5439.00
IUUC-Hsa-046612	Homo sapiens	73.85	0.00e+00	5494.00
IUUC-Laf-054133	Loxodonta africana	72.92	0.00e+00	5353.00
IUUC-Mcc-055373	Macaca mulatta	73.49	0.00e+00	5469.00
IUUC-Mga-059475	Meleagris gallopavo	67.12	0.00e+00	4820.00
IUUC-Mmr-061795	Microcebus murinus	73.95	0.00e+00	5452.00
IUUC-Mlu-067930	Myotis lucifugus	69.79	0.00e+00	3011.00
IUUC-Nle-069205	Nomascus leucogenys	72.75	0.00e+00	5352.00
IUUC-Ont-071764	Oreochromis niloticus	58.29	0.00e+00	4000.00
IUUC-Ocu-074479	Oryctolagus cuniculus	72.26	0.00e+00	5355.00
IUUC-Ptr-091393	Pan troglodytes	73.76	0.00e+00	5483.00
IUUC-Pan-092369	Papio anubis	73.47	0.00e+00	5448.00
IUUC-Pfo-096100	Poecilia formosa	59.28	0.00e+00	3078.00
IUUC-Pab-098733	Pongo abelii	72.60	0.00e+00	5357.00
IUUC-Pca-100429	Procavia capensis	66.81	0.00e+00	1688.00
IUUC-Sar-113059	Sorex araneus	76.73	0.00e+00	1231.00
IUUC-Ssc-115879	Sus scrofa	68.24	0.00e+00	4878.00
IUUC-Tru-118616	Takifugu rubripes	56.84	0.00e+00	3939.00
IUUC-Tsy-119568	Tarsius syrichta	67.46	0.00e+00	3504.00
IUUC-Tni-120782	Tetraodon nigroviridis	56.88	0.00e+00	3976.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence