iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xtr-131770

Ensembl Protein ID

ENSXETP00000039630.3

UniProt Accession

F7BJ13; F7BJ13_XENTR

Genbank Protein ID

ENSXETP00000039630

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAMC01137301

Gene Name

arpc1a

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000018292.3	ENSXETT00000039630.3	ENSXETP00000039630.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.70e-15	55.0	51	84

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           H+++vt++++ ++ ++lv+++ D + +vW+lr+g
   Q: 51   HNGRVTGIDWaPTsNRLVTCAADRNAYVWSLRDG 84
           9**********777*****************998 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MSLYSFGTDP ISCHAWNQDR TQVAISPNNN LVQIYQRSDN EWKKIHELTE HNGRVTGIDW 60
APTSNRLVTC AADRNAYVWS LRDGAWKPTL VLLRINRAAT CVKWSPRENK LAVGSGSKII 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCCTGT ACAGTTTCGG GACAGATCCA ATATCCTGTC ACGCGTGGAA CCAGGACCGA 60
ACCCGTAAGT ACCCGCCCCC CTGGCACCCA CAGCTCCCAA AGGGTTAATT ACTAGCCCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	41.52	5.00e-63	234.00
IUUC-Atr-002844	Amborella trichopoda	45.66	1.00e-53	202.00
IUUC-Ago-007966	Ashbya gossypii	40.54	4.00e-68	251.00
IUUC-Ani-009417	Aspergillus nidulans	45.10	1.00e-89	322.00
IUUC-Ame-010874	Astyanax mexicanus	68.63	8.00e-158	549.00
IUUC-Bgr-012192	Blumeria graminis	45.45	3.00e-82	298.00
IUUC-Bci-013616	Botrytis cinerea	46.07	4.00e-87	314.00
IUUC-Dre-027781	Danio rerio	66.01	8.00e-151	526.00
IUUC-Dse-031574	Dothistroma septosporum	46.58	4.00e-85	308.00
IUUC-Fso-038276	Fusarium solani	45.10	4.00e-86	311.00
IUUC-Gmo-038608	Gadus morhua	62.75	5.00e-142	496.00
IUUC-Gac-042536	Gasterosteus aculeatus	65.27	1.00e-148	518.00
IUUC-Hvu-047456	Hordeum vulgare	30.11	8.00e-16	76.60
IUUC-Kpa-049288	Komagataella pastoris	40.80	6.00e-74	270.00
IUUC-Lpe-050869	Leersia perrieri	40.79	1.00e-77	283.00
IUUC-Loc-051844	Lepisosteus oculatus	65.64	3.00e-146	510.00
IUUC-Lma-053109	Leptosphaeria maculans	44.60	2.00e-87	315.00
IUUC-Mor-057167	Magnaporthe oryzae	44.17	4.00e-85	307.00
IUUC-Ncr-068777	Neurospora crassa	45.13	3.00e-86	311.00
IUUC-Ont-072444	Oreochromis niloticus	64.71	2.00e-148	518.00
IUUC-Oba-075379	Oryza barthii	40.79	4.00e-77	281.00
IUUC-Obr-076404	Oryza brachyantha	40.51	2.00e-77	282.00
IUUC-Ogl-077409	Oryza glaberrima	38.24	4.00e-71	261.00
IUUC-Ogu-078759	Oryza glumaepatula	40.79	4.00e-77	281.00
IUUC-Oin-079118	Oryza indica	40.79	2.00e-77	282.00
IUUC-Olo-081055	Oryza longistaminata	43.96	3.00e-68	251.00
IUUC-Ome-081281	Oryza meridionalis	40.79	5.00e-77	281.00
IUUC-Oni-083043	Oryza nivara	40.79	4.00e-77	281.00
IUUC-Opu-083392	Oryza punctata	33.43	6.00e-53	201.00
IUUC-Oru-084839	Oryza rufipogon	40.79	4.00e-77	281.00
IUUC-Osa-085377	Oryza sativa	40.79	3.00e-77	281.00
IUUC-Ola-086754	Oryzias latipes	63.81	3.00e-150	524.00
IUUC-Pno-095031	Phaeosphaeria nodorum	45.56	2.00e-86	312.00
IUUC-Ppa-095858	Physcomitrella patens	44.63	7.00e-85	307.00
IUUC-Pfo-097144	Poecilia formosa	66.29	1.00e-141	495.00
IUUC-Pop-098954	Populus trichocarpa	36.33	2.00e-41	162.00
IUUC-Pgr-103309	Puccinia graminis	43.59	5.00e-89	320.00
IUUC-Ptt-103959	Puccinia triticina	41.92	5.00e-88	317.00
IUUC-Sce-106411	Saccharomyces cerevisiae	37.70	4.00e-64	238.00
IUUC-Sja-107792	Schizosaccharomyces japonicus	47.57	3.00e-92	331.00
IUUC-Spo-108053	Schizosaccharomyces pombe	45.41	4.00e-88	318.00
IUUC-Ssl-108606	Sclerotinia sclerotiorum	45.92	3.00e-87	314.00
IUUC-Smo-108836	Selaginella moellendorffii	43.21	1.00e-80	292.00
IUUC-Sit-110150	Setaria italica	39.34	2.00e-78	285.00
IUUC-Sly-111048	Solanum lycopersicum	41.39	5.00e-77	281.00
IUUC-Tru-118343	Takifugu rubripes	65.64	6.00e-151	526.00
IUUC-Tur-126640	Triticum urartu	38.06	4.00e-67	248.00
IUUC-Tme-127018	Tuber melanosporum	45.96	4.00e-85	307.00
IUUC-Vda-129706	Verticillium dahliae	46.81	7.00e-88	317.00
IUUC-Xma-134294	Xiphophorus maculatus	65.73	4.00e-141	493.00
IUUC-Yli-134471	Yarrowia lipolytica	47.35	4.00e-87	314.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence