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Tag Content
iUUCD ID IUUC-Laf-053979
Ensembl Protein ID ENSLAFP00000024411.1
UniProt Accession G3U9A3; G3U9A3_LOXAF
Protein Name Presenilin
Gene Name PSEN1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLAFG00000001076.3 ENSLAFT00000031002.1 ENSLAFP00000024411.1
ENSLAFG00000001076.3 ENSLAFT00000001076.3 ENSLAFP00000000905.3
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/Alpha-Helix/CUE 2.30e-08 34.3 245 281
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/Alpha-Helix/CUE

   S: 2    letaleqLkeiFPnldysviqvvLeantgsleaavnn 38
    +eta+e+++++FP+l+ys+++v+L++++ +++a+ +
   Q: 245 VETAQERNETLFPALIYSSTMVWLVNMAEGDPEAQRR 281
    89**************************999998876 PP
   

Organism Loxodonta africana
Functional Description
(View)

Functional Description



     Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.
Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.
Protein Sequence
(Fasta)
FRTQNDSRER QRHEHTERRQ RGNPEPLSNG RPQGITQQVV EQDEEEDEEL TLKYGAKHVI 60
MLFVPVTLCM VVVVATIKSV SFYTRKDGQL IYTPFTEDTE TVGQRALHSI LNAAIMISVI 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Laf-053979|UBD,CUE|Loxodonta africana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TTTAGAACTC AAGTAATGAT GGGCCTATTG TTAATCCCAG ATTTAATTGT TACATTTTCT 60
GTTTTTATAT AGAATACCCT GATTCTCCTG AGAATCCGAC TTACTGAAGA AGTTTTTCTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Laf-053979|UBD,CUE|Loxodonta africana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0256--Endoplasmic reticulum
KW-0333--Golgi apparatus
KW-0378--Hydrolase
KW-0472--Membrane
KW-0914--Notch signaling pathway
KW-0645--Protease
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR002031--Pept_A22A_PS1
IPR001108--Peptidase_A22A
IPR006639--Preselin/SPP

Pfam

PF01080--Presenilin

PRINTS

PR01072--PRESENILIN
PR01073--PRESENILIN1

SMART

SM00730--PSN

Gene Ontology

GO:0016235--C:aggresome
GO:0030424--C:axon
GO:0005938--C:cell cortex
GO:0030054--C:cell junction
GO:0005813--C:centrosome
GO:0035253--C:ciliary rootlet
GO:0031410--C:cytoplasmic vesicle
GO:0043198--C:dendritic shaft
GO:0005789--C:endoplasmic reticulum membrane
GO:0070765--C:gamma-secretase complex
GO:0000139--C:Golgi membrane
GO:0030426--C:growth cone
GO:0005887--C:integral component of plasma membrane
GO:0000776--C:kinetochore
GO:0045121--C:membrane raft
GO:0005739--C:mitochondrion
GO:0043025--C:neuronal cell body
GO:0005640--C:nuclear outer membrane
GO:0098793--C:presynapse
GO:0005791--C:rough endoplasmic reticulum
GO:0005790--C:smooth endoplasmic reticulum
GO:0042500--F:aspartic endopeptidase activity, intramembrane cleaving
GO:0005262--F:calcium channel activity
GO:0000186--P:activation of MAPKK activity
GO:0000045--P:autophagosome assembly
GO:0034205--P:beta-amyloid formation
GO:0001568--P:blood vessel development
GO:0048854--P:brain morphogenesis
GO:0021870--P:Cajal-Retzius cell differentiation
GO:0001708--P:cell fate specification
GO:0006974--P:cellular response to DNA damage stimulus
GO:0021795--P:cerebral cortex cell migration
GO:0015871--P:choline transport
GO:0021904--P:dorsal/ventral neural tube patterning
GO:0030326--P:embryonic limb morphogenesis
GO:0050673--P:epithelial cell proliferation
GO:0001947--P:heart looping
GO:0002244--P:hematopoietic progenitor cell differentiation
GO:0035556--P:intracellular signal transduction
GO:0015813--P:L-glutamate transport
GO:0006509--P:membrane protein ectodomain proteolysis
GO:0007613--P:memory
GO:0006839--P:mitochondrial transport
GO:0043011--P:myeloid dendritic cell differentiation
GO:2001234--P:negative regulation of apoptotic signaling pathway
GO:0050771--P:negative regulation of axonogenesis
GO:0007175--P:negative regulation of epidermal growth factor-activated receptor activity
GO:2000059--P:negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0051444--P:negative regulation of ubiquitin-protein transferase activity
GO:0051402--P:neuron apoptotic process
GO:0048666--P:neuron development
GO:0001764--P:neuron migration
GO:0007220--P:Notch receptor processing
GO:0007219--P:Notch signaling pathway
GO:0043065--P:positive regulation of apoptotic process
GO:0050820--P:positive regulation of coagulation
GO:0060999--P:positive regulation of dendritic spine development
GO:0043406--P:positive regulation of MAP kinase activity
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0001921--P:positive regulation of receptor recycling
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0009791--P:post-embryonic development
GO:0006486--P:protein glycosylation
GO:0016485--P:protein processing
GO:0015031--P:protein transport
GO:0060828--P:regulation of canonical Wnt signaling pathway
GO:0043393--P:regulation of protein binding
GO:0060075--P:regulation of resting membrane potential
GO:0048167--P:regulation of synaptic plasticity
GO:0051966--P:regulation of synaptic transmission, glutamatergic
GO:0006979--P:response to oxidative stress
GO:0016337--P:single organismal cell-cell adhesion
GO:0048705--P:skeletal system morphogenesis
GO:0043589--P:skin morphogenesis
GO:0051563--P:smooth endoplasmic reticulum calcium ion homeostasis
GO:0001756--P:somitogenesis
GO:0016080--P:synaptic vesicle targeting
GO:0002286--P:T cell activation involved in immune response
GO:0050852--P:T cell receptor signaling pathway
GO:0048538--P:thymus development

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000686 Aegilops tauschii 37.24 2.00e-24 108.00
IUUC-Aml-001648 Ailuropoda melanoleuca 87.16 1.00e-146 512.00
IUUC-Apl-003727 Anas platyrhynchos 84.16 5.00e-162 563.00
IUUC-Aca-004582 Anolis carolinensis 82.74 2.00e-165 575.00
IUUC-Aly-005455 Arabidopsis lyrata 46.03 1.00e-17 84.30
IUUC-Ame-011500 Astyanax mexicanus 72.38 1.00e-135 476.00
IUUC-Bta-013026 Bos taurus 84.14 2.00e-171 595.00
IUUC-Bdi-014196 Brachypodium distachyon 35.11 1.00e-26 114.00
IUUC-Bra-017580 Brassica rapa 35.57 2.00e-26 113.00
IUUC-Cja-019994 Callithrix jacchus 91.51 2.00e-180 625.00
IUUC-Cfa-020074 Canis familiaris 89.19 0.00e+00 629.00
IUUC-Cpo-022237 Cavia porcellus 88.69 0.00e+00 640.00
IUUC-Csa-023537 Chlorocebus sabaeus 90.09 0.00e+00 657.00
IUUC-Cho-024735 Choloepus hoffmanni 80.41 3.00e-168 584.00
IUUC-Dre-028689 Danio rerio 77.19 8.00e-134 470.00
IUUC-Dno-029758 Dasypus novemcinctus 89.86 0.00e+00 631.00
IUUC-Dor-030609 Dipodomys ordii 68.40 6.00e-144 503.00
IUUC-Ete-032487 Echinops telfairi 84.29 3.00e-84 305.00
IUUC-Eeu-035134 Erinaceus europaeus 85.39 1.00e-126 446.00
IUUC-Fca-036243 Felis catus 89.64 1.00e-178 619.00
IUUC-Fal-036600 Ficedula albicollis 85.04 5.00e-163 567.00
IUUC-Gga-040993 Gallus gallus 84.60 3.00e-164 571.00
IUUC-Gac-042342 Gasterosteus aculeatus 71.00 2.00e-117 416.00
IUUC-Ggo-044859 Gorilla gorilla 87.71 4.00e-148 516.00
IUUC-Hsa-046822 Homo sapiens 90.09 0.00e+00 656.00
IUUC-Hvu-047141 Hordeum vulgare 35.15 2.00e-22 100.00
IUUC-Itr-048420 Ictidomys tridecemlineatus 89.16 2.00e-140 491.00
IUUC-Lch-049946 Latimeria chalumnae 68.16 5.00e-124 437.00
IUUC-Lpe-051132 Leersia perrieri 33.13 1.00e-25 110.00
IUUC-Mcc-055682 Macaca mulatta 90.09 0.00e+00 656.00
IUUC-Meu-056004 Macropus eugenii 73.35 3.00e-141 494.00
IUUC-Mga-059466 Meleagris gallopavo 84.60 5.00e-164 570.00
IUUC-Mmr-061538 Microcebus murinus 71.85 2.00e-131 462.00
IUUC-Mdo-062122 Monodelphis domestica 86.55 5.00e-173 600.00
IUUC-Mmu-063176 Mus musculus 88.06 9.00e-177 612.00
IUUC-Mpu-065927 Mustela putorius furo 90.80 3.00e-180 624.00
IUUC-Mlu-067079 Myotis lucifugus 88.96 0.00e+00 645.00
IUUC-Nle-070180 Nomascus leucogenys 90.09 0.00e+00 656.00
IUUC-Opr-070847 Ochotona princeps 81.80 7.00e-163 566.00
IUUC-Ont-071846 Oreochromis niloticus 73.93 5.00e-133 467.00
IUUC-Oan-072783 Ornithorhynchus anatinus 80.43 2.00e-123 435.00
IUUC-Ocu-074527 Oryctolagus cuniculus 88.01 0.00e+00 639.00
IUUC-Oba-075256 Oryza barthii 34.56 1.00e-26 113.00
IUUC-Ogl-077097 Oryza glaberrima 34.56 2.00e-26 113.00
IUUC-Ogu-078570 Oryza glumaepatula 34.56 2.00e-26 113.00
IUUC-Oin-079244 Oryza indica 34.25 5.00e-26 112.00
IUUC-Olo-080484 Oryza longistaminata 35.36 2.00e-24 105.00
IUUC-Ome-081814 Oryza meridionalis 33.64 4.00e-27 115.00
IUUC-Oni-082057 Oryza nivara 34.25 4.00e-26 112.00
IUUC-Opu-084176 Oryza punctata 34.05 2.00e-26 113.00
IUUC-Oru-084618 Oryza rufipogon 34.56 2.00e-26 113.00
IUUC-Osa-085602 Oryza sativa 34.56 2.00e-26 113.00
IUUC-Oar-090348 Ovis aries 86.71 0.00e+00 641.00
IUUC-Ptr-091060 Pan troglodytes 90.09 0.00e+00 656.00
IUUC-Pan-091855 Papio anubis 81.53 2.00e-161 561.00
IUUC-Psi-093505 Pelodiscus sinensis 84.60 2.00e-165 575.00
IUUC-Pfo-097396 Poecilia formosa 69.66 2.00e-138 486.00
IUUC-Pab-098591 Pongo abelii 90.25 0.00e+00 651.00
IUUC-Pca-101029 Procavia capensis 87.61 6.00e-172 597.00
IUUC-Ppe-101495 Prunus persica 31.99 3.00e-33 136.00
IUUC-Pva-102244 Pteropus vampyrus 83.96 9.00e-166 576.00
IUUC-Rno-105861 Rattus norvegicus 86.55 9.00e-172 596.00
IUUC-Sha-107045 Sarcophilus harrisii 86.74 2.00e-173 601.00
IUUC-Sit-110624 Setaria italica 34.06 1.00e-24 107.00
IUUC-Stu-112433 Solanum tuberosum 34.76 2.00e-30 126.00
IUUC-Sar-113169 Sorex araneus 83.38 2.00e-129 455.00
IUUC-Sbi-114305 Sorghum bicolor 34.78 7.00e-25 108.00
IUUC-Ssc-115766 Sus scrofa 87.84 4.00e-175 607.00
IUUC-Tgu-116469 Taeniopygia guttata 83.53 7.00e-127 446.00
IUUC-Tru-117732 Takifugu rubripes 73.74 1.00e-131 462.00
IUUC-Tsy-119624 Tarsius syrichta 78.83 4.00e-160 557.00
IUUC-Tni-119852 Tetraodon nigroviridis 68.30 4.00e-125 441.00
IUUC-Tae-125925 Triticum aestivum 37.15 4.00e-26 112.00
IUUC-Tur-126237 Triticum urartu 37.24 1.00e-24 107.00
IUUC-Tbe-128148 Tupaia belangeri 80.45 5.00e-139 487.00
IUUC-Ttr-128793 Tursiops truncatus 88.42 1.00e-170 592.00
IUUC-Vpa-130625 Vicugna pacos 71.46 5.00e-128 451.00
IUUC-Vvi-131312 Vitis vinifera 32.33 3.00e-27 115.00
IUUC-Xtr-131790 Xenopus tropicalis 78.52 2.00e-143 502.00
IUUC-Xma-133377 Xiphophorus maculatus 70.07 3.00e-137 481.00
Created Date 25-Jun-2017

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