iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-106010

Ensembl Protein ID

ENSRNOP00000022076.4

UniProt Accession

D3ZNC9; D3ZNC9_RAT

Genbank Protein ID

ENSRNOP00000022076

Protein Name

Membrane-associated ring-CH-type finger 4

Genbank Nucleotide ID

AABR07068050

Gene Name

March4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000016472.5	ENSRNOT00000022076.5	ENSRNOP00000022076.4

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	90.16	1.00e-160	563.00	IUUC-Hsa-046918

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MLMPLGGLLW WCCCCCCGWY CCGLCTPAPQ MLRHQGLLKC RCRMLFNDLK VFLLRRPPPA 60
PLPMHGDPQL PGVAANNNTL PALGAGGWAG WRGPREAVGR ETPPLPPPPP LPPSVEDDWD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCGTAGCGT TCAGAATCAT TGACTCACAG TTGTCAGTCT AGGGGGTAAT TTATTTGCTG 60
CTTGGAGGGG TTATAAGAAG AGCCAATAAG AAAGAGGTTC CGCCATAACA TAGGAACACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR033275--MARCH-like
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51292--ZF_RING_CH

Pfam

PF12906--RINGv

SMART

SM00744--RINGv

Gene Ontology

GO:0005795--C:Golgi stack
GO:0016021--C:integral component of membrane
GO:0005802--C:trans-Golgi network
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

rno:367295

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001891	Ailuropoda melanoleuca	90.13	4.00e-174	603.00
IUUC-Aca-004387	Anolis carolinensis	78.92	2.00e-77	281.00
IUUC-Ame-010820	Astyanax mexicanus	69.26	3.00e-103	368.00
IUUC-Bta-012464	Bos taurus	85.77	2.00e-119	421.00
IUUC-Cja-019551	Callithrix jacchus	89.78	4.00e-171	593.00
IUUC-Cfa-020632	Canis familiaris	90.16	3.00e-176	611.00
IUUC-Cpo-021989	Cavia porcellus	90.93	2.00e-166	578.00
IUUC-Csa-023116	Chlorocebus sabaeus	90.41	3.00e-170	591.00
IUUC-Cho-024369	Choloepus hoffmanni	87.56	3.00e-169	587.00
IUUC-Cin-025794	Ciona intestinalis	35.71	2.00e-31	129.00
IUUC-Csv-026342	Ciona savignyi	36.65	8.00e-30	123.00
IUUC-Cgl-026475	Colletotrichum gloeosporioides	32.97	1.00e-06	47.40
IUUC-Dre-028502	Danio rerio	55.96	1.00e-107	383.00
IUUC-Dno-028874	Dasypus novemcinctus	88.81	5.00e-167	580.00
IUUC-Dor-030725	Dipodomys ordii	74.55	3.00e-121	428.00
IUUC-Eca-033517	Equus caballus	91.93	5.00e-166	577.00
IUUC-Eeu-034758	Erinaceus europaeus	87.34	9.00e-162	563.00
IUUC-Fca-035463	Felis catus	91.17	4.00e-166	577.00
IUUC-Fal-036690	Ficedula albicollis	76.10	1.00e-118	419.00
IUUC-Fso-038329	Fusarium solani	35.23	5.00e-08	51.60
IUUC-Gmo-039433	Gadus morhua	65.34	1.00e-97	349.00
IUUC-Ggr-039944	Gaeumannomyces graminis	37.33	3.00e-08	52.80
IUUC-Gga-040630	Gallus gallus	82.85	6.00e-131	459.00
IUUC-Gac-042616	Gasterosteus aculeatus	67.65	9.00e-101	360.00
IUUC-Ggo-045073	Gorilla gorilla	90.41	3.00e-164	571.00
IUUC-Hsa-046918	Homo sapiens	84.16	2.00e-164	571.00
IUUC-Lch-049497	Latimeria chalumnae	78.51	5.00e-108	383.00
IUUC-Loc-051876	Lepisosteus oculatus	69.93	2.00e-93	335.00
IUUC-Laf-054047	Loxodonta africana	89.09	9.00e-167	579.00
IUUC-Mcc-055218	Macaca mulatta	90.67	2.00e-171	594.00
IUUC-Meu-056883	Macropus eugenii	81.56	2.00e-152	532.00
IUUC-Mor-056968	Magnaporthe oryzae	34.72	4.00e-08	52.40
IUUC-Mga-059842	Meleagris gallopavo	83.68	4.00e-115	406.00
IUUC-Mvi-060405	Microbotryum violaceum	36.84	1.00e-10	61.20
IUUC-Mmr-061536	Microcebus murinus	90.93	1.00e-166	579.00
IUUC-Mdo-062808	Monodelphis domestica	80.26	2.00e-145	508.00
IUUC-Mmu-064281	Mus musculus	97.66	2.00e-180	624.00
IUUC-Mpu-066588	Mustela putorius furo	90.65	4.00e-168	583.00
IUUC-Mlu-067794	Myotis lucifugus	91.45	3.00e-161	561.00
IUUC-Ncr-068689	Neurospora crassa	41.07	8.00e-08	51.20
IUUC-Nle-069484	Nomascus leucogenys	90.41	3.00e-164	571.00
IUUC-Opr-070536	Ochotona princeps	75.52	1.00e-128	452.00
IUUC-Ont-072656	Oreochromis niloticus	68.75	5.00e-104	370.00
IUUC-Ocu-074169	Oryctolagus cuniculus	89.78	1.00e-176	612.00
IUUC-Ola-087504	Oryzias latipes	71.97	4.00e-93	334.00
IUUC-Olu-087713	Ostreococcus lucimarinus	43.86	2.00e-09	56.60
IUUC-Oga-088785	Otolemur garnettii	87.55	5.00e-121	426.00
IUUC-Oar-089431	Ovis aries	87.01	4.00e-161	560.00
IUUC-Ptr-090885	Pan troglodytes	90.41	3.00e-164	571.00
IUUC-Pan-092062	Papio anubis	91.38	6.00e-172	596.00
IUUC-Psi-093715	Pelodiscus sinensis	72.92	5.00e-146	510.00
IUUC-Pma-094557	Petromyzon marinus	52.08	1.00e-66	246.00
IUUC-Pfo-097278	Poecilia formosa	73.41	5.00e-91	327.00
IUUC-Pab-097767	Pongo abelii	84.16	2.00e-164	571.00
IUUC-Pva-102171	Pteropus vampyrus	91.71	6.00e-165	573.00
IUUC-Sha-106704	Sarcophilus harrisii	85.42	2.00e-168	584.00
IUUC-Sar-113178	Sorex araneus	70.57	1.00e-68	252.00
IUUC-Ssc-115455	Sus scrofa	92.19	1.00e-176	612.00
IUUC-Tgu-116933	Taeniopygia guttata	80.95	2.00e-129	455.00
IUUC-Tru-118477	Takifugu rubripes	69.49	4.00e-104	371.00
IUUC-Tni-120144	Tetraodon nigroviridis	69.06	3.00e-100	357.00
IUUC-Tbe-127850	Tupaia belangeri	90.00	3.00e-160	557.00
IUUC-Ttr-128599	Tursiops truncatus	90.44	8.00e-132	462.00
IUUC-Xtr-131961	Xenopus tropicalis	69.74	4.00e-137	480.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence