iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007590

UUCD1 version

UUC-ArT-01573

Ensembl Protein ID

AT1G21760.2

UniProt Accession

Q9XI00; SKI32_ARATH

Genbank Protein ID

AAD41431.1; AEE30153.1; AAP21235.1; BAE99994.1

Protein Name

F-box protein 7; SKP1-interacting partner 32

Genbank Nucleotide ID

AC007727; CP002684; BT006427; AK228033

Gene Name

SKIP32; FBP7; At1g21760; F8K7.20

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G21760	AT1G21760.2	AT1G21760.2
AT1G21760	AT1G21760.1	AT1G21760.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein-protein Interaction
iRefIndex	Mentha
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/SCF/F-box	F-box	17240087

Reviewed

Classification

Family	Identity	E-value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	32.95	7.00e-19	92.40	IUUC-Hsa-046445

Organism

Arabidopsis thaliana

Functional Description
(View)

Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Required for efficient protein synthesis during temperature stress conditions.

Protein Sequence
(Fasta)

MIGDALTIPS ELESALRLRT VQYFITKRPW LDLYGVHVRP VPPFGSTSRK PHFDPALIHR 60
CLPDELLFEV FARMMPYDLG RASCVCRKWR YTVRNPMFWR NACLKAWQTA GVIENYKILQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAAAATAATA TTAAAAAAAA GACAGAGAAA GAGTCTCTGT TTCTATCTTC TTCTTTTTTT 60
TTCCCGGTAA CAGGGAGCTC GCACGGGCGG CTACGAAATC GCTGTATTTT CAAATCGTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0496--Mitochondrion
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0346--Stress response
KW-0833--Ubl conjugation pathway

Interpro

IPR001810--F-box_dom

PROSITE

PS50181--FBOX

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX

Gene Ontology

GO:0005739--C:mitochondrion
GO:0005634--C:nucleus
GO:0090406--C:pollen tube
GO:0016567--P:protein ubiquitination
GO:0006417--P:regulation of translation
GO:0009409--P:response to cold
GO:0009408--P:response to heat

KEGG

ath:AT1G21760

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000378	Aegilops tauschii	49.77	2.00e-58	218.00
IUUC-Aml-001660	Ailuropoda melanoleuca	32.39	6.00e-19	88.20
IUUC-Atr-003042	Amborella trichopoda	70.25	6.00e-138	482.00
IUUC-Apl-004118	Anas platyrhynchos	32.77	1.00e-17	83.60
IUUC-Aca-005282	Anolis carolinensis	33.90	8.00e-21	94.00
IUUC-Aly-005616	Arabidopsis lyrata	95.73	0.00e+00	660.00
IUUC-Acl-008135	Aspergillus clavatus	25.00	7.00e-08	51.60
IUUC-Afl-008699	Aspergillus flavus	28.57	3.00e-09	55.80
IUUC-Afu-008824	Aspergillus fumigatus	25.00	4.00e-09	55.80
IUUC-Ani-009388	Aspergillus nidulans	25.58	1.00e-10	60.80
IUUC-Ang-009815	Aspergillus niger	26.82	4.00e-10	58.90
IUUC-Ate-010365	Aspergillus terreus	32.32	2.00e-08	53.90
IUUC-Ame-011406	Astyanax mexicanus	28.57	2.00e-17	83.20
IUUC-Bgr-012145	Blumeria graminis	27.50	5.00e-10	58.50
IUUC-Bta-012354	Bos taurus	32.39	2.00e-19	89.70
IUUC-Bci-013686	Botrytis cinerea	28.57	1.00e-15	77.00
IUUC-Bdi-014609	Brachypodium distachyon	61.42	7.00e-117	412.00
IUUC-Bol-016149	Brassica oleracea	91.46	0.00e+00	632.00
IUUC-Bra-017126	Brassica rapa	89.32	0.00e+00	629.00
IUUC-Cfa-020387	Canis familiaris	33.74	6.00e-19	88.20
IUUC-Cpo-021298	Cavia porcellus	32.95	1.00e-19	90.10
IUUC-Cre-022803	Chlamydomonas reinhardtii	32.16	1.00e-43	169.00
IUUC-Csa-024074	Chlorocebus sabaeus	32.39	1.00e-19	90.10
IUUC-Cho-024705	Choloepus hoffmanni	33.13	9.00e-19	87.40
IUUC-Cin-025508	Ciona intestinalis	33.07	6.00e-15	74.70
IUUC-Csv-026173	Ciona savignyi	31.03	1.00e-15	76.60
IUUC-Cgl-026681	Colletotrichum gloeosporioides	29.67	1.00e-14	73.90
IUUC-Cne-026854	Cryptococcus neoformans	25.51	3.00e-12	65.90
IUUC-Cme-027201	Cyanidioschyzon merolae	32.50	9.00e-17	80.50
IUUC-Dre-027811	Danio rerio	33.74	9.00e-18	84.00
IUUC-Dno-029907	Dasypus novemcinctus	32.39	1.00e-19	90.50
IUUC-Dor-030126	Dipodomys ordii	32.39	1.00e-19	90.50
IUUC-Dse-031460	Dothistroma septosporum	30.28	2.00e-10	59.70
IUUC-Dme-031882	Drosophila melanogaster	31.68	2.00e-16	79.30
IUUC-Ete-032852	Echinops telfairi	29.49	8.00e-06	44.30
IUUC-Eca-033835	Equus caballus	32.39	2.00e-19	89.70
IUUC-Eeu-034960	Erinaceus europaeus	32.95	4.00e-20	91.70
IUUC-Fca-035547	Felis catus	32.95	3.00e-19	89.40
IUUC-Fal-037181	Ficedula albicollis	32.32	1.00e-17	84.00
IUUC-Fox-038043	Fusarium oxysporum	25.41	6.00e-10	58.20
IUUC-Fso-038242	Fusarium solani	32.43	4.00e-08	52.40
IUUC-Gmo-039658	Gadus morhua	31.71	8.00e-17	80.50
IUUC-Ggr-040039	Gaeumannomyces graminis	42.42	6.00e-11	61.60
IUUC-Gga-040387	Gallus gallus	31.64	1.00e-18	87.00
IUUC-Gac-042247	Gasterosteus aculeatus	31.43	8.00e-16	77.40
IUUC-Gma-043470	Glycine max	80.25	6.00e-153	532.00
IUUC-Ggo-045216	Gorilla gorilla	32.20	4.00e-18	85.90
IUUC-Hsa-046445	Homo sapiens	32.95	3.00e-20	92.40
IUUC-Hvu-047506	Hordeum vulgare	60.49	1.00e-118	418.00
IUUC-Kpa-049180	Komagataella pastoris	27.40	7.00e-08	50.80
IUUC-Lch-049659	Latimeria chalumnae	33.52	2.00e-19	89.70
IUUC-Lpe-051160	Leersia perrieri	48.58	2.00e-62	231.00
IUUC-Loc-051734	Lepisosteus oculatus	30.68	8.00e-19	87.40
IUUC-Lma-053018	Leptosphaeria maculans	32.38	2.00e-07	50.40
IUUC-Laf-053937	Loxodonta africana	31.82	7.00e-19	87.80
IUUC-Mcc-055178	Macaca mulatta	32.39	1.00e-19	90.10
IUUC-Meu-056886	Macropus eugenii	29.79	7.00e-06	45.40
IUUC-Mor-056938	Magnaporthe oryzae	46.27	2.00e-11	63.90
IUUC-Mpo-057448	Magnaporthe poae	25.42	1.00e-11	63.20
IUUC-Mtr-058008	Medicago truncatula	78.70	6.00e-161	558.00
IUUC-Mla-058994	Melampsora laricipopulina	25.58	4.00e-08	52.80
IUUC-Mga-059979	Meleagris gallopavo	31.64	1.00e-18	87.00
IUUC-Mvi-060524	Microbotryum violaceum	26.32	7.00e-13	68.20
IUUC-Mmr-061163	Microcebus murinus	34.40	2.00e-15	75.90
IUUC-Mdo-062767	Monodelphis domestica	33.52	3.00e-20	92.40
IUUC-Mmu-064355	Mus musculus	31.82	8.00e-19	87.40
IUUC-Mac-064946	Musa acuminata	66.05	5.00e-124	436.00
IUUC-Mpu-066278	Mustela putorius furo	32.39	8.00e-19	87.40
IUUC-Mlu-068028	Myotis lucifugus	32.39	2.00e-19	89.70
IUUC-Nfi-068607	Neosartorya fischeri	34.48	9.00e-09	54.70
IUUC-Ncr-068733	Neurospora crassa	40.74	8.00e-12	64.70
IUUC-Nle-070061	Nomascus leucogenys	32.39	1.00e-19	90.10
IUUC-Ont-071715	Oreochromis niloticus	30.99	5.00e-17	81.60
IUUC-Oan-073385	Ornithorhynchus anatinus	31.82	6.00e-19	88.20
IUUC-Ocu-074608	Oryctolagus cuniculus	31.25	8.00e-19	87.40
IUUC-Oba-075531	Oryza barthii	47.84	6.00e-74	269.00
IUUC-Obr-076891	Oryza brachyantha	61.44	2.00e-121	427.00
IUUC-Ogl-077925	Oryza glaberrima	61.42	2.00e-115	407.00
IUUC-Ogu-078352	Oryza glumaepatula	47.84	6.00e-74	269.00
IUUC-Oin-080025	Oryza indica	61.42	1.00e-115	408.00
IUUC-Olo-080624	Oryza longistaminata	58.18	3.00e-100	357.00
IUUC-Ome-081745	Oryza meridionalis	61.73	8.00e-116	409.00
IUUC-Oni-082992	Oryza nivara	61.42	3.00e-115	407.00
IUUC-Opu-083594	Oryza punctata	58.41	6.00e-104	369.00
IUUC-Oru-084792	Oryza rufipogon	47.80	2.00e-70	258.00
IUUC-Osa-086272	Oryza sativa	62.50	7.00e-50	188.00
IUUC-Ola-086443	Oryzias latipes	32.32	4.00e-18	85.10
IUUC-Olu-087849	Ostreococcus lucimarinus	31.03	1.00e-35	142.00
IUUC-Oga-087973	Otolemur garnettii	33.09	6.00e-16	78.20
IUUC-Oar-089479	Ovis aries	32.39	3.00e-19	89.00
IUUC-Ptr-091217	Pan troglodytes	32.39	1.00e-19	90.10
IUUC-Pan-092809	Papio anubis	32.39	1.00e-19	90.10
IUUC-Psi-093838	Pelodiscus sinensis	32.20	7.00e-20	90.90
IUUC-Pma-094194	Petromyzon marinus	26.92	2.00e-09	56.20
IUUC-Pno-094974	Phaeosphaeria nodorum	39.19	9.00e-08	51.20
IUUC-Ppa-095612	Physcomitrella patens	64.17	6.00e-119	419.00
IUUC-Pfo-097152	Poecilia formosa	31.43	7.00e-17	80.90
IUUC-Pab-098181	Pongo abelii	32.95	1.00e-19	90.50
IUUC-Pop-098903	Populus trichocarpa	69.75	4.00e-136	476.00
IUUC-Pca-100097	Procavia capensis	29.73	7.00e-20	90.90
IUUC-Ppe-101770	Prunus persica	79.63	2.00e-160	557.00
IUUC-Pva-103016	Pteropus vampyrus	32.39	2.00e-19	89.70
IUUC-Pgr-103565	Puccinia graminis	27.93	2.00e-08	53.50
IUUC-Pte-104397	Pyrenophora teres	25.17	6.00e-07	48.50
IUUC-Pyt-104651	Pyrenophora triticirepentis	24.47	2.00e-03	38.10
IUUC-Rno-104872	Rattus norvegicus	32.39	5.00e-19	88.20
IUUC-Sce-106426	Saccharomyces cerevisiae	33.80	7.00e-06	43.90
IUUC-Sha-106487	Sarcophilus harrisii	33.15	2.00e-19	89.00
IUUC-Sja-107695	Schizosaccharomyces japonicus	28.30	1.00e-13	69.70
IUUC-Spo-108193	Schizosaccharomyces pombe	26.47	2.00e-14	72.40
IUUC-Ssl-108468	Sclerotinia sclerotiorum	29.67	2.00e-12	66.20
IUUC-Smo-109062	Selaginella moellendorffii	63.23	1.00e-111	395.00
IUUC-Sit-110175	Setaria italica	60.19	5.00e-118	416.00
IUUC-Sly-111632	Solanum lycopersicum	74.84	3.00e-143	499.00
IUUC-Stu-112393	Solanum tuberosum	75.79	3.00e-145	506.00
IUUC-Sar-113758	Sorex araneus	30.68	2.00e-18	85.90
IUUC-Sbi-114191	Sorghum bicolor	60.19	3.00e-120	424.00
IUUC-Sre-115169	Sporisorium reilianum	25.25	7.00e-11	62.00
IUUC-Ssc-116249	Sus scrofa	32.95	3.00e-19	89.00
IUUC-Tgu-117421	Taeniopygia guttata	32.32	1.00e-17	84.00
IUUC-Tru-118114	Takifugu rubripes	30.86	1.00e-17	84.00
IUUC-Tsy-119305	Tarsius syrichta	32.57	3.00e-20	92.40
IUUC-Tni-120491	Tetraodon nigroviridis	32.00	1.00e-18	86.70
IUUC-Tca-120948	Theobroma cacao	80.56	5.00e-162	562.00
IUUC-Tre-121934	Trichoderma reesei	29.34	1.00e-09	57.40
IUUC-Tvi-122432	Trichoderma virens	27.03	3.00e-10	59.30
IUUC-Tae-125349	Triticum aestivum	61.42	8.00e-121	426.00
IUUC-Tur-126459	Triticum urartu	62.77	2.00e-69	254.00
IUUC-Tme-127190	Tuber melanosporum	46.75	1.00e-14	73.60
IUUC-Tbe-127313	Tupaia belangeri	40.48	2.00e-16	79.00
IUUC-Ttr-128471	Tursiops truncatus	32.39	2.00e-19	89.70
IUUC-Uma-129486	Ustilago maydis	25.25	7.00e-10	58.90
IUUC-Vda-129897	Verticillium dahliae	27.96	3.00e-12	65.90
IUUC-Vpa-130277	Vicugna pacos	41.24	5.00e-12	64.70
IUUC-Vvi-130912	Vitis vinifera	75.08	5.00e-148	516.00
IUUC-Xtr-132405	Xenopus tropicalis	32.95	7.00e-19	87.80
IUUC-Xma-133338	Xiphophorus maculatus	31.43	2.00e-17	83.20
IUUC-Yli-134647	Yarrowia lipolytica	41.79	2.00e-09	56.60
IUUC-Zma-135447	Zea mays	60.19	3.00e-120	423.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence