iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000018235.1	ENSSHAT00000021700.1	ENSSHAP00000021526.1
ENSSHAG00000018235.1	ENSSHAT00000021701.1	ENSSHAP00000021527.1
ENSSHAG00000018235.1	ENSSHAT00000021702.1	ENSSHAP00000021528.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-07	32.1	2982	3013

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDl 30
           gHt +vtcla   +  llvsGs D t+ +WDl
   Q: 2982 GHTKPVTCLAAsmTYSLLVSGSCDQTCILWDL 3013
           8********88543368**************8 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MDKEDFLKEQ EDAPNKTDHE ASPGDLLQPE LFQGRHPQCP TALWEMLERQ FLEYAQAAPF 60
LNPETQQRTL LSLLPLFLKA WEKSAGIIYF PSIQEFAEEV SKHLAQEIHK ALRGKPAEEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTACCAGAA CTGAGACATG GATAAAGAAG ATTTCTTAAA GGAGCAAGAA GATGCACCTA 60
ACAAGACAGA TCATGAAGCA AGCCCTGGTG ATCTTTTGCA GCCTGAACTC TTCCAGGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR031570--DUF4704
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF15787--DUF4704
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001827	Ailuropoda melanoleuca	74.81	0.00e+00	1296.00
IUUC-Apl-003570	Anas platyrhynchos	70.20	0.00e+00	1191.00
IUUC-Ame-011105	Astyanax mexicanus	42.51	0.00e+00	1210.00
IUUC-Bta-013119	Bos taurus	67.10	0.00e+00	4102.00
IUUC-Cja-019166	Callithrix jacchus	67.44	0.00e+00	4071.00
IUUC-Cfa-021196	Canis familiaris	66.50	0.00e+00	4128.00
IUUC-Cpo-021853	Cavia porcellus	66.67	0.00e+00	2455.00
IUUC-Cho-024719	Choloepus hoffmanni	54.95	0.00e+00	630.00
IUUC-Dre-028733	Danio rerio	44.15	0.00e+00	2465.00
IUUC-Dno-028965	Dasypus novemcinctus	65.41	0.00e+00	3922.00
IUUC-Dor-030745	Dipodomys ordii	63.72	0.00e+00	959.00
IUUC-Ete-032877	Echinops telfairi	59.87	0.00e+00	1441.00
IUUC-Eca-034106	Equus caballus	69.68	0.00e+00	2552.00
IUUC-Fca-036341	Felis catus	68.64	0.00e+00	3069.00
IUUC-Fal-036739	Ficedula albicollis	53.21	0.00e+00	2236.00
IUUC-Gmo-039386	Gadus morhua	40.91	0.00e+00	1507.00
IUUC-Gga-041220	Gallus gallus	60.76	0.00e+00	3692.00
IUUC-Gac-041289	Gasterosteus aculeatus	39.46	0.00e+00	2091.00
IUUC-Ggo-045630	Gorilla gorilla	68.14	0.00e+00	4170.00
IUUC-Hsa-046627	Homo sapiens	68.20	0.00e+00	4174.00
IUUC-Itr-048709	Ictidomys tridecemlineatus	66.44	0.00e+00	4072.00
IUUC-Lch-049803	Latimeria chalumnae	54.01	0.00e+00	1914.00
IUUC-Loc-052606	Lepisosteus oculatus	47.17	0.00e+00	2657.00
IUUC-Mcc-055003	Macaca mulatta	67.87	0.00e+00	4145.00
IUUC-Mmr-060933	Microcebus murinus	65.96	0.00e+00	4072.00
IUUC-Mdo-061823	Monodelphis domestica	87.80	0.00e+00	3207.00
IUUC-Mmu-064029	Mus musculus	65.30	0.00e+00	4005.00
IUUC-Mpu-065681	Mustela putorius furo	66.32	0.00e+00	4101.00
IUUC-Mlu-067231	Myotis lucifugus	72.18	0.00e+00	1182.00
IUUC-Nle-069676	Nomascus leucogenys	68.18	0.00e+00	4196.00
IUUC-Ont-072509	Oreochromis niloticus	41.94	0.00e+00	2158.00
IUUC-Ocu-074714	Oryctolagus cuniculus	65.29	0.00e+00	4034.00
IUUC-Ola-087135	Oryzias latipes	39.50	0.00e+00	2011.00
IUUC-Oga-087927	Otolemur garnettii	66.21	0.00e+00	4003.00
IUUC-Oar-089783	Ovis aries	67.09	0.00e+00	4054.00
IUUC-Pan-092402	Papio anubis	67.94	0.00e+00	4145.00
IUUC-Psi-093913	Pelodiscus sinensis	58.20	0.00e+00	3359.00
IUUC-Pfo-096036	Poecilia formosa	40.47	0.00e+00	2175.00
IUUC-Pab-097718	Pongo abelii	67.93	0.00e+00	1822.00
IUUC-Pva-102690	Pteropus vampyrus	68.52	0.00e+00	2008.00
IUUC-Ptt-103873	Puccinia triticina	31.76	5.00e-97	350.00
IUUC-Rno-105815	Rattus norvegicus	65.38	0.00e+00	4001.00
IUUC-Ssc-115874	Sus scrofa	60.54	0.00e+00	3504.00
IUUC-Tgu-116983	Taeniopygia guttata	66.84	0.00e+00	1323.00
IUUC-Tru-118108	Takifugu rubripes	39.89	0.00e+00	2060.00
IUUC-Tsy-118938	Tarsius syrichta	72.34	0.00e+00	1006.00
IUUC-Tbe-127325	Tupaia belangeri	60.13	0.00e+00	1230.00
IUUC-Ttr-128788	Tursiops truncatus	65.37	0.00e+00	2332.00
IUUC-Vpa-130657	Vicugna pacos	62.52	0.00e+00	922.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence