iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Laf-054395

UUCD1 version

UUC-LoA-00412

Ensembl Protein ID

ENSLAFP00000010123.3

UniProt Accession

G3T8T4; G3T8T4_LOXAF

Protein Name

Uncharacterized protein

Gene Name

WDR3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000012108.3	ENSLAFT00000012111.3	ENSLAFP00000010123.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-44	148.1	589	628
UBD/Beta-Prp	2.00e-95	319.8	36	220

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH+ +v c++   d  l+++Gs D ++k+W l+ g++ ks
   Q: 589  GHKLPVLCMDIsYDgALIATGSADRNVKIWGLDFGDCHKS 628
           79999***988845599*******************9875 PP

UBD/Beta-Prp

   S: 65   kilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllv 153
             +v +   +++ +wdl++g+ + +l+g +++v++l  sp+g +l++G +d  ir++ l +g+    t++gh+++++++++++ g  lv
   Q: 36   GRYVAVPACEHVFIWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNV-TFNGHKAAITTLKYDQLGGRLV 123
           455555555677789999999999999999999999999999999999999999999999999998.9999999999999999999999 PP
   S: 154  sGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgss 242
           sGs+D+ + +Wd+ +++ l++l+g h+d+++   f ++++ lvs ++d+ vk wdl t++c +t+ gh++ v+ + + ++++rl++g+s
   Q: 124  SGSKDTDIIVWDVINESGLYRLKG-HKDAITQALFLREKNLLVSSGKDTVVKWWDLDTQHCFKTMVGHRTEVWGLVLVSEEKRLITGAS 211
           999999999999999999999988.9999999999999999999999999999999999999999999999999999999999999999 PP
   S: 243  DgsiriWdl 251
           D  +r Wd+
   Q: 212  DSELRAWDI 220
           999999987 PP

Organism

Loxodonta africana

Protein Sequence
(Fasta)

MGLTKQYLRY VASAVFGLIG SQKGNIVFVT LRGEKGRYVA VPACEHVFIW DLRKGEKILI 60
LQGLKQEVTC LCPSPDGLHL AVGYEDGSIR IFSLLSGEGN VTFNGHKAAI TTLKYDQLGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGCTTA CCAAGCAATA CCTACGCTAC GTTGCCAGTG CAGTCTTTGG CCTGATTGGC 60
AGCCAAAAAG GTAATATTGT CTTTGTGACG CTTCGTGGTG AGAAAGGGCG CTATGTGGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031965--C:nuclear membrane
GO:0005730--C:nucleolus
GO:0003723--F:RNA binding

KEGG

lav:100663799

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	39.06	1.00e-152	533.00
IUUC-Aml-001245	Ailuropoda melanoleuca	92.05	0.00e+00	1626.00
IUUC-Atr-002700	Amborella trichopoda	39.09	2.00e-174	606.00
IUUC-Apl-004164	Anas platyrhynchos	77.96	0.00e+00	1046.00
IUUC-Aca-004765	Anolis carolinensis	73.89	0.00e+00	1355.00
IUUC-Aly-006503	Arabidopsis lyrata	39.58	2.00e-178	619.00
IUUC-Ath-006848	Arabidopsis thaliana	39.83	1.00e-180	626.00
IUUC-Ago-007909	Ashbya gossypii	35.29	2.00e-147	516.00
IUUC-Acl-008238	Aspergillus clavatus	39.33	0.00e+00	634.00
IUUC-Afl-008544	Aspergillus flavus	39.48	1.00e-177	617.00
IUUC-Afu-008868	Aspergillus fumigatus	39.02	1.00e-178	620.00
IUUC-Ani-009367	Aspergillus nidulans	38.94	3.00e-175	608.00
IUUC-Ang-009732	Aspergillus niger	39.36	1.00e-180	627.00
IUUC-Aor-010140	Aspergillus oryzae	39.54	2.00e-178	619.00
IUUC-Ate-010572	Aspergillus terreus	38.40	5.00e-177	615.00
IUUC-Ame-010956	Astyanax mexicanus	72.88	0.00e+00	811.00
IUUC-Bgr-012296	Blumeria graminis	37.35	4.00e-173	602.00
IUUC-Bta-012716	Bos taurus	93.21	0.00e+00	1696.00
IUUC-Bci-013699	Botrytis cinerea	37.53	1.00e-162	566.00
IUUC-Bdi-014525	Brachypodium distachyon	38.69	2.00e-162	566.00
IUUC-Bol-015117	Brassica oleracea	39.58	1.00e-173	603.00
IUUC-Bra-016869	Brassica rapa	40.09	3.00e-176	612.00
IUUC-Cel-018570	Caenorhabditis elegans	33.37	3.00e-131	462.00
IUUC-Cja-019425	Callithrix jacchus	91.75	0.00e+00	1620.00
IUUC-Cfa-020787	Canis familiaris	91.20	0.00e+00	1639.00
IUUC-Cpo-021729	Cavia porcellus	91.32	0.00e+00	1165.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	42.46	2.00e-108	387.00
IUUC-Csa-024098	Chlorocebus sabaeus	92.90	0.00e+00	1644.00
IUUC-Cho-024495	Choloepus hoffmanni	77.96	0.00e+00	923.00
IUUC-Cin-025245	Ciona intestinalis	48.63	3.00e-164	571.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	37.33	2.00e-165	576.00
IUUC-Cne-026835	Cryptococcus neoformans	46.83	3.00e-130	459.00
IUUC-Cme-027162	Cyanidioschyzon merolae	27.94	3.00e-38	154.00
IUUC-Dre-027874	Danio rerio	70.96	0.00e+00	1280.00
IUUC-Dno-028905	Dasypus novemcinctus	92.15	0.00e+00	1652.00
IUUC-Dor-030383	Dipodomys ordii	86.76	0.00e+00	798.00
IUUC-Dse-031297	Dothistroma septosporum	37.96	3.00e-165	575.00
IUUC-Dme-031956	Drosophila melanogaster	42.49	0.00e+00	679.00
IUUC-Ete-032608	Echinops telfairi	83.22	0.00e+00	921.00
IUUC-Eca-034181	Equus caballus	92.26	0.00e+00	1640.00
IUUC-Eeu-034495	Erinaceus europaeus	91.03	0.00e+00	1567.00
IUUC-Fca-035994	Felis catus	91.65	0.00e+00	1533.00
IUUC-Fal-036611	Ficedula albicollis	77.44	0.00e+00	1324.00
IUUC-Fox-037807	Fusarium oxysporum	37.76	2.00e-169	590.00
IUUC-Fso-038090	Fusarium solani	37.82	1.00e-167	583.00
IUUC-Gmo-039018	Gadus morhua	61.71	0.00e+00	687.00
IUUC-Ggr-039748	Gaeumannomyces graminis	37.53	2.00e-169	589.00
IUUC-Gga-040707	Gallus gallus	79.32	0.00e+00	1334.00
IUUC-Gac-042334	Gasterosteus aculeatus	63.90	0.00e+00	684.00
IUUC-Gma-043033	Glycine max	37.78	6.00e-175	608.00
IUUC-Ggo-045334	Gorilla gorilla	92.70	0.00e+00	1610.00
IUUC-Hsa-046996	Homo sapiens	93.00	0.00e+00	1612.00
IUUC-Hvu-047381	Hordeum vulgare	33.89	8.00e-88	317.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	91.83	0.00e+00	1626.00
IUUC-Kpa-049185	Komagataella pastoris	34.36	6.00e-150	525.00
IUUC-Lch-050098	Latimeria chalumnae	66.52	0.00e+00	1125.00
IUUC-Lpe-050710	Leersia perrieri	36.87	4.00e-165	575.00
IUUC-Loc-052745	Lepisosteus oculatus	68.88	0.00e+00	1196.00
IUUC-Lma-053104	Leptosphaeria maculans	39.03	2.00e-176	613.00
IUUC-Mcc-055077	Macaca mulatta	92.90	0.00e+00	1635.00
IUUC-Meu-056418	Macropus eugenii	81.45	0.00e+00	735.00
IUUC-Mor-057031	Magnaporthe oryzae	38.12	1.00e-155	544.00
IUUC-Mpo-057420	Magnaporthe poae	36.98	1.00e-166	580.00
IUUC-Mtr-057838	Medicago truncatula	39.08	0.00e+00	632.00
IUUC-Mla-058854	Melampsora laricipopulina	36.74	6.00e-156	545.00
IUUC-Mga-060120	Meleagris gallopavo	74.01	0.00e+00	1246.00
IUUC-Mvi-060407	Microbotryum violaceum	44.91	1.00e-138	487.00
IUUC-Mmr-060635	Microcebus murinus	91.84	0.00e+00	1600.00
IUUC-Mdo-063023	Monodelphis domestica	86.62	0.00e+00	1573.00
IUUC-Mmu-064103	Mus musculus	88.77	0.00e+00	1600.00
IUUC-Mac-065569	Musa acuminata	38.73	3.00e-170	592.00
IUUC-Mpu-066462	Mustela putorius furo	91.73	0.00e+00	1647.00
IUUC-Mlu-067894	Myotis lucifugus	92.79	0.00e+00	1668.00
IUUC-Nfi-068321	Neosartorya fischeri	38.84	7.00e-178	617.00
IUUC-Ncr-068661	Neurospora crassa	37.50	5.00e-167	581.00
IUUC-Nle-069409	Nomascus leucogenys	92.68	0.00e+00	1626.00
IUUC-Opr-070445	Ochotona princeps	82.43	0.00e+00	1504.00
IUUC-Ont-072339	Oreochromis niloticus	70.13	0.00e+00	1246.00
IUUC-Oan-073688	Ornithorhynchus anatinus	75.92	0.00e+00	1333.00
IUUC-Ocu-074227	Oryctolagus cuniculus	93.43	0.00e+00	1679.00
IUUC-Oba-075635	Oryza barthii	37.21	7.00e-160	557.00
IUUC-Obr-076897	Oryza brachyantha	38.61	6.00e-170	591.00
IUUC-Ogl-077555	Oryza glaberrima	37.11	2.00e-159	556.00
IUUC-Ogu-078724	Oryza glumaepatula	37.21	5.00e-161	561.00
IUUC-Oin-080030	Oryza indica	37.21	5.00e-160	558.00
IUUC-Olo-080687	Oryza longistaminata	35.35	8.00e-149	521.00
IUUC-Ome-081867	Oryza meridionalis	37.32	9.00e-161	560.00
IUUC-Oni-082559	Oryza nivara	37.21	5.00e-160	558.00
IUUC-Opu-083332	Oryza punctata	40.00	8.00e-149	521.00
IUUC-Oru-084455	Oryza rufipogon	37.21	3.00e-160	558.00
IUUC-Osa-085793	Oryza sativa	37.21	3.00e-160	558.00
IUUC-Ola-087395	Oryzias latipes	68.68	0.00e+00	1147.00
IUUC-Olu-087768	Ostreococcus lucimarinus	38.38	2.00e-160	559.00
IUUC-Oga-088574	Otolemur garnettii	92.15	0.00e+00	1651.00
IUUC-Oar-089453	Ovis aries	91.11	0.00e+00	1677.00
IUUC-Ptr-090694	Pan troglodytes	92.68	0.00e+00	1608.00
IUUC-Pan-092420	Papio anubis	92.59	0.00e+00	1629.00
IUUC-Psi-093683	Pelodiscus sinensis	82.06	0.00e+00	1466.00
IUUC-Pma-094197	Petromyzon marinus	57.02	7.00e-73	266.00
IUUC-Pno-094783	Phaeosphaeria nodorum	38.25	6.00e-174	604.00
IUUC-Ppa-095208	Physcomitrella patens	39.64	5.00e-174	604.00
IUUC-Pfo-096299	Poecilia formosa	69.31	0.00e+00	1262.00
IUUC-Pab-098706	Pongo abelii	93.11	0.00e+00	1625.00
IUUC-Pop-099275	Populus trichocarpa	38.78	5.00e-174	604.00
IUUC-Pca-100796	Procavia capensis	78.09	0.00e+00	1241.00
IUUC-Ppe-101861	Prunus persica	40.08	4.00e-179	622.00
IUUC-Pva-103241	Pteropus vampyrus	86.68	0.00e+00	1473.00
IUUC-Pgr-103432	Puccinia graminis	42.13	1.00e-119	424.00
IUUC-Ptt-103742	Puccinia triticina	40.44	5.00e-106	379.00
IUUC-Pte-104069	Pyrenophora teres	38.25	6.00e-167	581.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	38.09	9.00e-174	603.00
IUUC-Rno-105219	Rattus norvegicus	87.71	0.00e+00	1548.00
IUUC-Sce-106271	Saccharomyces cerevisiae	42.23	3.00e-122	432.00
IUUC-Sha-107550	Sarcophilus harrisii	85.97	0.00e+00	1562.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	37.38	1.00e-163	570.00
IUUC-Spo-108239	Schizosaccharomyces pombe	39.06	2.00e-172	599.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	38.45	3.00e-169	588.00
IUUC-Smo-109477	Selaginella moellendorffii	38.57	8.00e-169	587.00
IUUC-Sit-110000	Setaria italica	37.92	2.00e-159	556.00
IUUC-Sly-111595	Solanum lycopersicum	38.87	3.00e-179	622.00
IUUC-Stu-112516	Solanum tuberosum	38.50	2.00e-177	616.00
IUUC-Sar-113195	Sorex araneus	81.83	0.00e+00	1302.00
IUUC-Sbi-114465	Sorghum bicolor	37.25	3.00e-166	579.00
IUUC-Sre-115006	Sporisorium reilianum	35.10	2.00e-151	530.00
IUUC-Ssc-115929	Sus scrofa	92.05	0.00e+00	1620.00
IUUC-Tgu-117282	Taeniopygia guttata	77.55	0.00e+00	1322.00
IUUC-Tru-118406	Takifugu rubripes	68.40	0.00e+00	1187.00
IUUC-Tsy-119170	Tarsius syrichta	90.37	0.00e+00	1617.00
IUUC-Tni-119721	Tetraodon nigroviridis	66.74	0.00e+00	1170.00
IUUC-Tca-121761	Theobroma cacao	39.89	0.00e+00	639.00
IUUC-Tre-121908	Trichoderma reesei	36.73	4.00e-165	575.00
IUUC-Tvi-122547	Trichoderma virens	37.89	2.00e-168	586.00
IUUC-Tae-125496	Triticum aestivum	38.75	5.00e-166	578.00
IUUC-Tur-126811	Triticum urartu	39.95	9.00e-166	577.00
IUUC-Tme-126987	Tuber melanosporum	39.20	0.00e+00	627.00
IUUC-Tbe-127315	Tupaia belangeri	93.20	0.00e+00	866.00
IUUC-Ttr-129165	Tursiops truncatus	82.82	0.00e+00	1414.00
IUUC-Uma-129651	Ustilago maydis	35.58	2.00e-150	526.00
IUUC-Vda-129973	Verticillium dahliae	38.30	3.00e-160	559.00
IUUC-Vpa-130163	Vicugna pacos	81.15	0.00e+00	712.00
IUUC-Vvi-131402	Vitis vinifera	37.92	4.00e-178	618.00
IUUC-Xtr-132296	Xenopus tropicalis	73.38	0.00e+00	1294.00
IUUC-Xma-133028	Xiphophorus maculatus	69.17	0.00e+00	1263.00
IUUC-Yli-134484	Yarrowia lipolytica	36.98	1.00e-153	537.00
IUUC-Zma-135938	Zea mays	36.61	6.00e-165	574.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence