iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cme-027129

Ensembl Protein ID

CMB073CT

UniProt Accession

M1VA19; M1VA19_CYAM1

Genbank Protein ID

BAM78887.1

Protein Name

Similar to ribosome assembly protein RRB1

Genbank Nucleotide ID

AP006484

Gene Name

CYME_CMB073C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CMB073C	CMB073CT	CMB073CT

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-20	70.9	316	348

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf....sdtllvsGsdDgtikvWDlr 31
           H ++v+++a+    + + ++sG d g+i+vWDlr
   Q: 316  HPCDVNAIAWnrryP-KQIISGDDQGQIHVWDLR 348
           999*******98554.88**************97 PP

Organism

Cyanidioschyzon merolae

Protein Sequence
(Fasta)

MPKGLRRKGA AQRSNFPSTS ASKNTSCRRK TKTGTGSVYT ESTETVYDLS VYKQLHRLTL 60
EWPCLSFDWC RVPENFKDDG ELWLLLGSQA RFADANALYL LHLSGLALTA SDGSSSSSGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCAAAAG GTCTCCGGCG AAAAGGAGCA GCCCAGCGGA GCAACTTCCC TTCGACGAGC 60
GCGAGCAAGA ATACCTCCTG CAGGAGGAAG ACAAAGACTG GCACAGGTTC TGTGTATACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

cme:CYME_CMB073C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000677	Aegilops tauschii	29.61	6.00e-44	169.00
IUUC-Aml-002309	Ailuropoda melanoleuca	34.60	5.00e-51	192.00
IUUC-Atr-002461	Amborella trichopoda	32.49	5.00e-55	206.00
IUUC-Aca-004760	Anolis carolinensis	34.06	1.00e-49	187.00
IUUC-Aly-005405	Arabidopsis lyrata	32.87	2.00e-51	194.00
IUUC-Ath-007178	Arabidopsis thaliana	33.10	3.00e-52	197.00
IUUC-Ago-007735	Ashbya gossypii	28.67	1.00e-39	155.00
IUUC-Acl-008294	Aspergillus clavatus	30.90	3.00e-42	164.00
IUUC-Afl-008486	Aspergillus flavus	32.75	7.00e-46	175.00
IUUC-Afu-009019	Aspergillus fumigatus	31.85	6.00e-43	166.00
IUUC-Ani-009465	Aspergillus nidulans	32.66	1.00e-45	174.00
IUUC-Ang-009641	Aspergillus niger	31.09	2.00e-42	164.00
IUUC-Ate-010426	Aspergillus terreus	30.75	1.00e-41	162.00
IUUC-Ame-010856	Astyanax mexicanus	34.55	6.00e-51	192.00
IUUC-Bgr-012258	Blumeria graminis	30.10	1.00e-30	125.00
IUUC-Bta-012437	Bos taurus	34.99	7.00e-50	189.00
IUUC-Bci-013647	Botrytis cinerea	29.48	4.00e-39	153.00
IUUC-Bdi-014728	Brachypodium distachyon	31.95	3.00e-56	209.00
IUUC-Bol-015601	Brassica oleracea	32.87	2.00e-52	197.00
IUUC-Bra-017677	Brassica rapa	38.19	2.00e-32	130.00
IUUC-Cel-018454	Caenorhabditis elegans	33.58	3.00e-53	199.00
IUUC-Cja-018859	Callithrix jacchus	33.92	4.00e-51	192.00
IUUC-Cfa-020912	Canis familiaris	35.93	3.00e-51	193.00
IUUC-Cpo-021368	Cavia porcellus	34.52	2.00e-49	187.00
IUUC-Cre-022850	Chlamydomonas reinhardtii	31.98	7.00e-26	109.00
IUUC-Csa-023599	Chlorocebus sabaeus	35.22	3.00e-50	190.00
IUUC-Cin-025718	Ciona intestinalis	32.46	1.00e-49	188.00
IUUC-Csv-025806	Ciona savignyi	36.81	9.00e-45	171.00
IUUC-Cgl-026766	Colletotrichum gloeosporioides	27.44	1.00e-29	122.00
IUUC-Cne-026781	Cryptococcus neoformans	33.17	2.00e-47	181.00
IUUC-Dre-028225	Danio rerio	33.00	4.00e-51	193.00
IUUC-Dno-029792	Dasypus novemcinctus	33.49	2.00e-47	181.00
IUUC-Dor-030773	Dipodomys ordii	31.60	3.00e-15	73.90
IUUC-Dse-031289	Dothistroma septosporum	31.33	9.00e-40	155.00
IUUC-Dme-031676	Drosophila melanogaster	32.54	2.00e-52	197.00
IUUC-Eca-033618	Equus caballus	35.07	5.00e-51	192.00
IUUC-Fca-036102	Felis catus	33.63	3.00e-49	186.00
IUUC-Fox-037899	Fusarium oxysporum	32.27	3.00e-43	166.00
IUUC-Fso-038130	Fusarium solani	32.76	2.00e-43	167.00
IUUC-Gmo-038741	Gadus morhua	35.21	2.00e-50	191.00
IUUC-Ggr-040086	Gaeumannomyces graminis	30.66	2.00e-39	154.00
IUUC-Gac-042243	Gasterosteus aculeatus	34.65	2.00e-49	187.00
IUUC-Gma-044177	Glycine max	32.49	9.00e-54	201.00
IUUC-Ggo-044564	Gorilla gorilla	34.35	2.00e-51	193.00
IUUC-Hsa-046021	Homo sapiens	34.35	5.00e-51	192.00
IUUC-Hvu-047721	Hordeum vulgare	30.00	2.00e-48	184.00
IUUC-Itr-048189	Ictidomys tridecemlineatus	35.70	4.00e-51	192.00
IUUC-Kpa-049271	Komagataella pastoris	28.94	3.00e-39	154.00
IUUC-Lch-049974	Latimeria chalumnae	31.40	2.00e-42	164.00
IUUC-Lpe-051388	Leersia perrieri	28.74	8.00e-47	178.00
IUUC-Lma-053010	Leptosphaeria maculans	29.59	7.00e-41	159.00
IUUC-Laf-054058	Loxodonta africana	36.43	2.00e-51	193.00
IUUC-Mcc-055246	Macaca mulatta	35.22	2.00e-50	190.00
IUUC-Meu-056795	Macropus eugenii	32.73	9.00e-45	172.00
IUUC-Mor-057175	Magnaporthe oryzae	30.48	2.00e-40	157.00
IUUC-Mpo-057388	Magnaporthe poae	28.06	5.00e-26	109.00
IUUC-Mtr-057752	Medicago truncatula	32.95	1.00e-53	201.00
IUUC-Mla-058904	Melampsora laricipopulina	31.14	1.00e-46	178.00
IUUC-Mvi-060525	Microbotryum violaceum	31.84	1.00e-42	164.00
IUUC-Mmr-060905	Microcebus murinus	35.70	9.00e-52	195.00
IUUC-Mmu-063428	Mus musculus	34.75	9.00e-50	188.00
IUUC-Mac-065276	Musa acuminata	32.11	3.00e-51	193.00
IUUC-Mpu-066062	Mustela putorius furo	34.67	1.00e-48	185.00
IUUC-Mlu-068115	Myotis lucifugus	39.44	8.00e-33	130.00
IUUC-Nfi-068512	Neosartorya fischeri	31.09	3.00e-40	157.00
IUUC-Ncr-068629	Neurospora crassa	29.95	3.00e-38	150.00
IUUC-Nle-070016	Nomascus leucogenys	32.75	3.00e-46	176.00
IUUC-Ont-072230	Oreochromis niloticus	34.96	4.00e-51	192.00
IUUC-Oan-072759	Ornithorhynchus anatinus	27.13	3.00e-38	150.00
IUUC-Ocu-074511	Oryctolagus cuniculus	33.26	9.00e-48	181.00
IUUC-Oba-075093	Oryza barthii	28.74	3.00e-47	180.00
IUUC-Obr-076130	Oryza brachyantha	29.89	2.00e-52	197.00
IUUC-Ogl-077167	Oryza glaberrima	30.67	5.00e-54	202.00
IUUC-Ogu-078111	Oryza glumaepatula	29.58	3.00e-44	172.00
IUUC-Oin-079564	Oryza indica	29.20	3.00e-48	183.00
IUUC-Olo-080909	Oryza longistaminata	26.71	1.00e-41	161.00
IUUC-Ome-081536	Oryza meridionalis	31.89	5.00e-45	172.00
IUUC-Oni-082453	Oryza nivara	29.43	9.00e-48	182.00
IUUC-Opu-083503	Oryza punctata	31.07	7.00e-41	159.00
IUUC-Oru-085056	Oryza rufipogon	27.42	2.00e-35	140.00
IUUC-Osa-085735	Oryza sativa	30.57	3.00e-54	203.00
IUUC-Ola-087066	Oryzias latipes	34.06	5.00e-46	176.00
IUUC-Olu-087594	Ostreococcus lucimarinus	30.14	2.00e-45	174.00
IUUC-Oga-087974	Otolemur garnettii	36.17	5.00e-53	199.00
IUUC-Oar-089902	Ovis aries	34.60	3.00e-49	186.00
IUUC-Ptr-090469	Pan troglodytes	32.97	7.00e-47	178.00
IUUC-Pan-092858	Papio anubis	34.54	2.00e-50	190.00
IUUC-Psi-094092	Pelodiscus sinensis	33.67	3.00e-26	110.00
IUUC-Pno-094919	Phaeosphaeria nodorum	28.81	5.00e-39	152.00
IUUC-Ppa-095849	Physcomitrella patens	30.89	2.00e-51	194.00
IUUC-Pfo-096535	Poecilia formosa	35.10	4.00e-51	193.00
IUUC-Pab-098478	Pongo abelii	34.57	2.00e-51	193.00
IUUC-Pop-100032	Populus trichocarpa	31.00	1.00e-48	184.00
IUUC-Pca-100403	Procavia capensis	38.99	2.00e-42	163.00
IUUC-Ppe-101997	Prunus persica	33.11	8.00e-53	198.00
IUUC-Pva-102423	Pteropus vampyrus	33.26	2.00e-49	187.00
IUUC-Pgr-103339	Puccinia graminis	31.31	6.00e-52	196.00
IUUC-Ptt-103937	Puccinia triticina	32.21	1.00e-51	195.00
IUUC-Pte-104051	Pyrenophora teres	29.76	3.00e-37	147.00
IUUC-Pyt-104644	Pyrenophora triticirepentis	29.52	2.00e-37	147.00
IUUC-Rno-106118	Rattus norvegicus	35.04	1.00e-48	185.00
IUUC-Sce-106330	Saccharomyces cerevisiae	30.11	1.00e-38	151.00
IUUC-Sha-106564	Sarcophilus harrisii	33.22	3.00e-31	126.00
IUUC-Sja-107969	Schizosaccharomyces japonicus	31.76	4.00e-48	183.00
IUUC-Spo-108351	Schizosaccharomyces pombe	32.12	1.00e-50	191.00
IUUC-Ssl-108452	Sclerotinia sclerotiorum	31.26	7.00e-42	162.00
IUUC-Smo-109619	Selaginella moellendorffii	29.05	3.00e-48	183.00
IUUC-Sit-109857	Setaria italica	31.44	3.00e-51	193.00
IUUC-Sly-111029	Solanum lycopersicum	34.59	6.00e-42	162.00
IUUC-Stu-112645	Solanum tuberosum	32.49	8.00e-51	192.00
IUUC-Sar-113342	Sorex araneus	33.50	3.00e-46	176.00
IUUC-Sbi-114359	Sorghum bicolor	32.12	8.00e-53	198.00
IUUC-Sre-115098	Sporisorium reilianum	31.93	8.00e-45	172.00
IUUC-Ssc-115496	Sus scrofa	35.22	2.00e-50	190.00
IUUC-Tru-117662	Takifugu rubripes	34.87	9.00e-49	185.00
IUUC-Tni-120564	Tetraodon nigroviridis	33.70	1.00e-43	167.00
IUUC-Tca-121710	Theobroma cacao	30.88	6.00e-52	196.00
IUUC-Tre-122239	Trichoderma reesei	31.26	4.00e-41	159.00
IUUC-Tvi-122589	Trichoderma virens	29.98	2.00e-40	157.00
IUUC-Tae-125574	Triticum aestivum	31.72	3.00e-51	193.00
IUUC-Tur-126135	Triticum urartu	32.21	4.00e-45	173.00
IUUC-Tme-127073	Tuber melanosporum	30.32	4.00e-34	136.00
IUUC-Ttr-128383	Tursiops truncatus	34.12	3.00e-48	183.00
IUUC-Uma-129345	Ustilago maydis	32.63	1.00e-49	188.00
IUUC-Vda-129893	Verticillium dahliae	30.05	2.00e-43	167.00
IUUC-Vvi-131067	Vitis vinifera	29.82	4.00e-50	189.00
IUUC-Xtr-132603	Xenopus tropicalis	33.25	1.00e-47	181.00
IUUC-Xma-133149	Xiphophorus maculatus	34.62	6.00e-50	189.00
IUUC-Yli-134459	Yarrowia lipolytica	28.68	8.00e-36	142.00
IUUC-Zma-135655	Zea mays	32.87	4.00e-53	199.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence