iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000010829.1	ENSONIT00000013626.1	ENSONIP00000013616.1
ENSONIG00000010829.1	ENSONIT00000013627.1	ENSONIP00000013617.1
ENSONIG00000010829.1	ENSONIT00000013628.1	ENSONIP00000013618.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.80e-12	46.3	100	165

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggede.....k.....slveCekCrewfHpaClkls.....veeelpnsekwiCpkCrsk 54
           +vC vC+e+g+++     +     +l+eC++C+e++Hp+Clk       v++elpn+  w+CpkC+++
   Q: 100  AVCVVCKEAGKEDtledeEdkfnfMLMECSICNEIVHPNCLKVCdasgvVNDELPNC--WECPKCNHA 165
           79*********9977766156889*******************99************..*******85 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MALSLSGDDE EYDSESEQQR AANRPKPKMG TSSAVKLPSN RSSSGARRRR TRCRKCEACL 60
RSECGECHFC KDMKKFGGPG RMKQSCIMRQ CIAPVLPHTA VCVVCKEAGK EDTLEDEEDK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAATAACGAA CCATCCCTGA AACCTGTATA TTTGTTAAAT TTCTGTGCAA ACCTCTGCGT 60
TTACGTTTCT TTCCAATACG TTTTTAATTA CAGTTGTGCC GTTTACGTTT TGATATTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR019786--Zinc_finger_PHD-type_CS
IPR002857--Znf_CXXC
IPR011011--Znf_FYVE_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51058--ZF_CXXC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00646--F-box
PF16866--PHD_4
PF02008--zf-CXXC

Gene Ontology

GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011114	Astyanax mexicanus	77.69	7.00e-156	544.00
IUUC-Gmo-039130	Gadus morhua	59.40	2.00e-134	473.00
IUUC-Gac-042378	Gasterosteus aculeatus	81.99	0.00e+00	796.00
IUUC-Oga-089054	Otolemur garnettii	67.25	3.00e-127	449.00
IUUC-Pfo-096409	Poecilia formosa	89.22	0.00e+00	811.00
IUUC-Tru-118758	Takifugu rubripes	80.71	0.00e+00	787.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence