iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-117827

Ensembl Protein ID

ENSTRUP00000031296.1

UniProt Accession

H2U2Y5; H2U2Y5_TAKRU

Protein Name

Uncharacterized protein

Gene Name

wdr20b; LOC101068631

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000012360.1	ENSTRUT00000031417.1	ENSTRUP00000031295.1
ENSTRUG00000012360.1	ENSTRUT00000031418.1	ENSTRUP00000031296.1
ENSTRUG00000012360.1	ENSTRUT00000031419.1	ENSTRUP00000031297.1
ENSTRUG00000012360.1	ENSTRUT00000031420.1	ENSTRUP00000031298.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-11	43.9	266	295

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrtgv 34
            c+++ +d +++v+G+ D  + vW++++++
   Q: 266  LCVCWsPDgRYIVAGGEDDLVTVWSFSDCR 295
           6*****999****************98876 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MAAEGGGKEM NEIKTQFTTR EGVYKLLTHS EYSRPNRVPF NSQGSNPVKV SFVNVNDQSG 60
NGERICFNVG RELYFYIYKG VRKAADLSKP IDKRIYKGTQ PTCHDFNPLT ATAESVSLLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCGG AGGGAGGAGG GAAGGAGATG AACGAAATTA AAACACAATT CACGACTCGG 60
GAAGGCGTCT ATAAACTCCT AACTCACTCT GAATACAGCC GACCGAACAG GGTGCCTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016579--P:protein deubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002459	Amborella trichopoda	36.78	4.00e-54	206.00
IUUC-Aly-005833	Arabidopsis lyrata	36.78	3.00e-55	209.00
IUUC-Ath-006649	Arabidopsis thaliana	36.78	6.00e-55	208.00
IUUC-Bol-015990	Brassica oleracea	36.78	1.00e-53	204.00
IUUC-Bra-017842	Brassica rapa	26.64	1.00e-14	74.70
IUUC-Cin-025617	Ciona intestinalis	49.85	3.00e-88	318.00
IUUC-Dse-031362	Dothistroma septosporum	29.30	1.00e-44	174.00
IUUC-Gmo-039005	Gadus morhua	87.54	0.00e+00	1080.00
IUUC-Gac-042372	Gasterosteus aculeatus	90.15	0.00e+00	1072.00
IUUC-Ont-071358	Oreochromis niloticus	84.02	0.00e+00	1057.00
IUUC-Pfo-096374	Poecilia formosa	88.73	0.00e+00	1103.00
IUUC-Sja-107886	Schizosaccharomyces japonicus	27.96	6.00e-37	148.00
IUUC-Sit-110829	Setaria italica	35.33	3.00e-52	199.00
IUUC-Tni-119661	Tetraodon nigroviridis	94.14	0.00e+00	1089.00
IUUC-Xma-134123	Xiphophorus maculatus	88.29	0.00e+00	1109.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence