iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016319

Ensembl Protein ID

Bo1g014890.1

UniProt Accession

A0A0D3A3B6; A0A0D3A3B6_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo1g014890	Bo1g014890.1	Bo1g014890.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-22	79.4	15	48

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH  sv +++f ++  ll +Gs Dg +++WD+ +
   Q: 15   GHRHSVMDVSFhPSkSLLFTGSADGELRIWDTIQ 48
           8***********77799**************755 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MSKRPPPDPV AVLRGHRHSV MDVSFHPSKS LLFTGSADGE LRIWDTIQHR TVSSAWAHSR 60
ANGVLAVAAS PWLGENKVIS QGRDGTVKCW DIEDGGLSRD PLLVLNTSAY HFCKFSLVKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCAAGA GACCGCCGCC TGATCCGGTG GCTGTGCTTA GAGGACACCG TCACTCTGTT 60
ATGGACGTTT CGTTCCATCC ATCAAAGTCT CTGCTTTTCA CTGGGTAAGT TGGTGTTCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0048700--P:acquisition of desiccation tolerance in seed
GO:0006974--P:cellular response to DNA damage stimulus
GO:0031570--P:DNA integrity checkpoint
GO:0009793--P:embryo development ending in seed dormancy
GO:0048481--P:plant ovule development
GO:0009663--P:plasmodesma organization
GO:0010497--P:plasmodesmata-mediated intercellular transport
GO:0009555--P:pollen development
GO:0071158--P:positive regulation of cell cycle arrest
GO:0006282--P:regulation of DNA repair
GO:2000280--P:regulation of root development
GO:0010044--P:response to aluminum ion
GO:0072718--P:response to cisplatin

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000703	Aegilops tauschii	45.77	1.00e-95	343.00
IUUC-Aml-001556	Ailuropoda melanoleuca	28.93	2.00e-34	139.00
IUUC-Atr-002691	Amborella trichopoda	53.58	2.00e-123	434.00
IUUC-Apl-003227	Anas platyrhynchos	30.85	3.00e-39	155.00
IUUC-Aly-006168	Arabidopsis lyrata	86.23	0.00e+00	691.00
IUUC-Ath-007145	Arabidopsis thaliana	86.23	0.00e+00	686.00
IUUC-Acl-008132	Aspergillus clavatus	25.43	3.00e-21	96.30
IUUC-Afl-008655	Aspergillus flavus	26.40	3.00e-24	105.00
IUUC-Afu-008778	Aspergillus fumigatus	26.35	3.00e-24	105.00
IUUC-Ang-009760	Aspergillus niger	26.77	2.00e-24	107.00
IUUC-Bgr-012119	Blumeria graminis	28.68	1.00e-28	120.00
IUUC-Bta-012556	Bos taurus	29.44	3.00e-35	142.00
IUUC-Bdi-014151	Brachypodium distachyon	53.52	2.00e-113	402.00
IUUC-Bra-016675	Brassica rapa	95.32	0.00e+00	760.00
IUUC-Cja-019523	Callithrix jacchus	29.60	3.00e-33	135.00
IUUC-Cfa-021217	Canis familiaris	32.84	3.00e-31	128.00
IUUC-Cpo-021506	Cavia porcellus	29.06	3.00e-32	132.00
IUUC-Csa-023674	Chlorocebus sabaeus	29.47	1.00e-32	133.00
IUUC-Cgl-026723	Colletotrichum gloeosporioides	25.07	1.00e-19	90.10
IUUC-Cme-027295	Cyanidioschyzon merolae	26.99	8.00e-09	54.70
IUUC-Dre-027592	Danio rerio	28.46	5.00e-36	144.00
IUUC-Dno-029880	Dasypus novemcinctus	32.92	7.00e-31	127.00
IUUC-Dor-030266	Dipodomys ordii	37.17	5.00e-28	117.00
IUUC-Dse-031212	Dothistroma septosporum	27.82	2.00e-26	113.00
IUUC-Dme-032209	Drosophila melanogaster	25.59	5.00e-23	101.00
IUUC-Eca-033371	Equus caballus	28.86	6.00e-35	140.00
IUUC-Fca-035558	Felis catus	29.19	1.00e-34	139.00
IUUC-Fal-036794	Ficedula albicollis	31.61	5.00e-40	157.00
IUUC-Gmo-038742	Gadus morhua	28.09	8.00e-34	137.00
IUUC-Gga-040868	Gallus gallus	30.61	3.00e-41	161.00
IUUC-Gac-041646	Gasterosteus aculeatus	29.38	7.00e-40	157.00
IUUC-Gma-044269	Glycine max	61.54	2.00e-139	488.00
IUUC-Ggo-044553	Gorilla gorilla	28.91	1.00e-33	136.00
IUUC-Hsa-046217	Homo sapiens	29.18	1.00e-33	136.00
IUUC-Hvu-047647	Hordeum vulgare	51.59	9.00e-113	399.00
IUUC-Itr-048649	Ictidomys tridecemlineatus	29.10	3.00e-33	135.00
IUUC-Lch-050134	Latimeria chalumnae	29.02	5.00e-36	144.00
IUUC-Lpe-051524	Leersia perrieri	49.74	5.00e-95	340.00
IUUC-Loc-051757	Lepisosteus oculatus	28.94	2.00e-33	136.00
IUUC-Laf-053733	Loxodonta africana	34.43	3.00e-31	128.00
IUUC-Mcc-055477	Macaca mulatta	29.02	8.00e-26	110.00
IUUC-Meu-056758	Macropus eugenii	39.71	2.00e-11	62.80
IUUC-Mor-057289	Magnaporthe oryzae	24.92	9.00e-12	64.70
IUUC-Mtr-058616	Medicago truncatula	59.69	1.00e-125	442.00
IUUC-Mga-059637	Meleagris gallopavo	25.90	4.00e-18	84.70
IUUC-Mvi-060385	Microbotryum violaceum	22.65	6.00e-22	98.20
IUUC-Mmr-061675	Microcebus murinus	29.87	6.00e-33	134.00
IUUC-Mdo-062782	Monodelphis domestica	29.79	4.00e-35	141.00
IUUC-Mmu-064058	Mus musculus	31.59	1.00e-40	160.00
IUUC-Mac-065262	Musa acuminata	56.81	4.00e-127	447.00
IUUC-Mpu-066633	Mustela putorius furo	36.49	1.00e-27	117.00
IUUC-Mlu-067333	Myotis lucifugus	33.21	2.00e-31	129.00
IUUC-Nfi-068581	Neosartorya fischeri	26.12	2.00e-25	110.00
IUUC-Ncr-068680	Neurospora crassa	24.49	5.00e-19	89.00
IUUC-Nle-069485	Nomascus leucogenys	40.96	3.00e-30	125.00
IUUC-Oan-073361	Ornithorhynchus anatinus	37.58	4.00e-25	107.00
IUUC-Ocu-073923	Oryctolagus cuniculus	26.87	1.00e-25	110.00
IUUC-Oba-075743	Oryza barthii	48.87	5.00e-104	370.00
IUUC-Obr-076879	Oryza brachyantha	54.59	3.00e-108	384.00
IUUC-Ogl-077813	Oryza glaberrima	53.53	5.00e-114	404.00
IUUC-Ogu-078196	Oryza glumaepatula	48.87	5.00e-104	370.00
IUUC-Oin-080131	Oryza indica	53.26	4.00e-113	401.00
IUUC-Olo-080613	Oryza longistaminata	56.32	7.00e-61	226.00
IUUC-Ome-081912	Oryza meridionalis	49.87	5.00e-104	370.00
IUUC-Oni-082813	Oryza nivara	49.74	1.00e-103	369.00
IUUC-Opu-083663	Oryza punctata	53.42	2.00e-119	421.00
IUUC-Oru-085102	Oryza rufipogon	49.61	2.00e-102	365.00
IUUC-Osa-086204	Oryza sativa	53.26	4.00e-113	401.00
IUUC-Ola-086541	Oryzias latipes	29.23	8.00e-32	130.00
IUUC-Olu-087776	Ostreococcus lucimarinus	37.72	2.00e-19	88.20
IUUC-Oga-088039	Otolemur garnettii	30.59	1.00e-34	139.00
IUUC-Oar-089704	Ovis aries	50.65	2.00e-19	86.30
IUUC-Ptr-091291	Pan troglodytes	28.91	1.00e-33	136.00
IUUC-Pan-092644	Papio anubis	29.74	5.00e-33	134.00
IUUC-Psi-093646	Pelodiscus sinensis	31.36	5.00e-40	157.00
IUUC-Ppa-095698	Physcomitrella patens	40.16	1.00e-78	286.00
IUUC-Pfo-096601	Poecilia formosa	29.38	4.00e-36	144.00
IUUC-Pab-098407	Pongo abelii	29.10	8.00e-34	137.00
IUUC-Pop-099193	Populus trichocarpa	64.21	2.00e-149	521.00
IUUC-Pca-100366	Procavia capensis	27.91	3.00e-28	118.00
IUUC-Ppe-101608	Prunus persica	65.13	5.00e-149	520.00
IUUC-Pva-102775	Pteropus vampyrus	35.58	1.00e-30	126.00
IUUC-Pte-104132	Pyrenophora teres	24.61	1.00e-15	77.80
IUUC-Rno-105626	Rattus norvegicus	28.72	2.00e-35	142.00
IUUC-Sha-106539	Sarcophilus harrisii	29.27	1.00e-32	133.00
IUUC-Sja-107694	Schizosaccharomyces japonicus	32.70	8.00e-18	84.30
IUUC-Spo-108326	Schizosaccharomyces pombe	35.71	4.00e-18	85.10
IUUC-Smo-108756	Selaginella moellendorffii	43.56	2.00e-88	318.00
IUUC-Sit-109771	Setaria italica	56.51	9.00e-127	446.00
IUUC-Sly-111138	Solanum lycopersicum	60.36	2.00e-137	481.00
IUUC-Stu-112425	Solanum tuberosum	61.14	5.00e-139	486.00
IUUC-Sbi-114356	Sorghum bicolor	56.08	1.00e-120	426.00
IUUC-Ssc-115256	Sus scrofa	43.24	2.00e-30	125.00
IUUC-Tgu-116774	Taeniopygia guttata	31.75	8.00e-31	127.00
IUUC-Tru-117900	Takifugu rubripes	28.65	3.00e-31	128.00
IUUC-Tsy-119540	Tarsius syrichta	47.37	3.00e-17	82.00
IUUC-Tni-120252	Tetraodon nigroviridis	29.90	2.00e-37	149.00
IUUC-Tca-121717	Theobroma cacao	65.97	3.00e-148	517.00
IUUC-Tre-122069	Trichoderma reesei	23.68	5.00e-18	85.10
IUUC-Tvi-122673	Trichoderma virens	24.93	9.00e-19	87.80
IUUC-Tae-123804	Triticum aestivum	52.65	3.00e-114	404.00
IUUC-Tme-127222	Tuber melanosporum	32.50	2.00e-14	73.20
IUUC-Ttr-129240	Tursiops truncatus	39.68	1.00e-30	126.00
IUUC-Uma-129437	Ustilago maydis	33.77	6.00e-14	71.60
IUUC-Vda-129913	Verticillium dahliae	24.02	9.00e-16	77.40
IUUC-Vvi-131718	Vitis vinifera	65.54	4.00e-151	527.00
IUUC-Xtr-132109	Xenopus tropicalis	27.01	1.00e-35	143.00
IUUC-Xma-133366	Xiphophorus maculatus	30.49	3.00e-37	148.00
IUUC-Zma-135563	Zea mays	47.76	2.00e-99	355.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence