iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002688

Ensembl Protein ID

ERM93812

UniProt Accession

W1NDN8; W1NDN8_AMBTC

Genbank Protein ID

ERM93812.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI397561

Gene Name

AMTR_s00138p00023960

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00138p00023960	ERM93812	ERM93812

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.50e-29	98.7	264	300

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           H+  vt+laf  ++  lvsGs Dgt++vWD+ +  ++
   Q: 264  HSKAVTSLAFsmDGFSLVSGSEDGTVRVWDVVSSQCI 300
           9999******7633559**************998886 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MESSREVVVV TSPLDSGISS FELGSGSEGL RLRSCTAHRH GLTCLGTHFL ASSQIQNSNS 60
GAIFYWSWNK PQPVIKSFPV EPIKPLASNA DGTYIVGGGS SGTIYLWEVA SGKMIRKWSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGTCCT CTCGAGAAGT GGTGGTGGTG ACGTCGCCTT TGGATTCAGG GATTAGTAGC 60
TTTGAACTGG GTTCTGGCTC AGAGGGTCTC CGCCTTCGCT CCTGCACTGC TCATCGTCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:1902184--P:negative regulation of shoot apical meristem development

KEGG

atr:18421706

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001040	Aegilops tauschii	38.08	4.00e-64	237.00
IUUC-Aly-006061	Arabidopsis lyrata	48.85	3.00e-113	400.00
IUUC-Ath-007111	Arabidopsis thaliana	47.63	3.00e-112	397.00
IUUC-Acl-008357	Aspergillus clavatus	29.27	3.00e-25	108.00
IUUC-Afl-008564	Aspergillus flavus	28.72	2.00e-23	102.00
IUUC-Afu-009113	Aspergillus fumigatus	29.83	8.00e-25	107.00
IUUC-Ang-009586	Aspergillus niger	27.86	3.00e-22	98.20
IUUC-Aor-009882	Aspergillus oryzae	28.72	2.00e-23	102.00
IUUC-Ame-010912	Astyanax mexicanus	30.85	4.00e-39	154.00
IUUC-Bdi-015054	Brachypodium distachyon	38.29	5.00e-82	296.00
IUUC-Bol-016342	Brassica oleracea	46.14	3.00e-97	347.00
IUUC-Bra-016967	Brassica rapa	46.14	2.00e-97	348.00
IUUC-Cja-019758	Callithrix jacchus	35.47	1.00e-38	152.00
IUUC-Cfa-020495	Canis familiaris	38.33	4.00e-36	144.00
IUUC-Csa-023416	Chlorocebus sabaeus	35.47	3.00e-39	155.00
IUUC-Csv-025918	Ciona savignyi	32.24	3.00e-26	111.00
IUUC-Cgl-026618	Colletotrichum gloeosporioides	28.57	2.00e-19	89.00
IUUC-Dre-027560	Danio rerio	30.00	2.00e-41	162.00
IUUC-Dno-029315	Dasypus novemcinctus	35.28	3.00e-44	171.00
IUUC-Dor-030935	Dipodomys ordii	38.16	3.00e-46	178.00
IUUC-Dse-031492	Dothistroma septosporum	28.35	7.00e-21	94.00
IUUC-Dme-032059	Drosophila melanogaster	33.24	2.00e-38	152.00
IUUC-Fal-037467	Ficedula albicollis	32.07	2.00e-42	165.00
IUUC-Fox-037903	Fusarium oxysporum	31.11	6.00e-24	103.00
IUUC-Gmo-039323	Gadus morhua	30.84	6.00e-29	120.00
IUUC-Ggr-040050	Gaeumannomyces graminis	31.50	4.00e-08	51.60
IUUC-Gga-040563	Gallus gallus	36.36	9.00e-37	146.00
IUUC-Gac-042641	Gasterosteus aculeatus	31.54	8.00e-43	166.00
IUUC-Gma-043856	Glycine max	47.42	7.00e-114	402.00
IUUC-Ggo-045137	Gorilla gorilla	35.78	5.00e-34	137.00
IUUC-Hsa-046335	Homo sapiens	35.78	7.00e-34	137.00
IUUC-Hvu-047685	Hordeum vulgare	38.58	3.00e-74	271.00
IUUC-Lch-049532	Latimeria chalumnae	31.02	2.00e-43	168.00
IUUC-Lpe-051321	Leersia perrieri	47.99	7.00e-66	243.00
IUUC-Loc-052471	Lepisosteus oculatus	28.77	3.00e-30	124.00
IUUC-Lma-053091	Leptosphaeria maculans	29.55	7.00e-24	104.00
IUUC-Mcc-055803	Macaca mulatta	35.47	3.00e-39	155.00
IUUC-Meu-056090	Macropus eugenii	37.40	7.00e-42	163.00
IUUC-Mor-057160	Magnaporthe oryzae	30.18	3.00e-17	82.00
IUUC-Mtr-058800	Medicago truncatula	47.62	1.00e-118	418.00
IUUC-Mla-058943	Melampsora laricipopulina	31.18	7.00e-22	97.80
IUUC-Mga-059282	Meleagris gallopavo	36.02	4.00e-37	147.00
IUUC-Mmr-061127	Microcebus murinus	36.39	6.00e-38	150.00
IUUC-Mdo-062350	Monodelphis domestica	37.79	1.00e-41	162.00
IUUC-Mmu-063706	Mus musculus	35.31	2.00e-43	168.00
IUUC-Mpu-066711	Mustela putorius furo	36.84	2.00e-43	168.00
IUUC-Mlu-068121	Myotis lucifugus	38.75	7.00e-36	143.00
IUUC-Nfi-068454	Neosartorya fischeri	29.15	1.00e-24	106.00
IUUC-Ncr-068914	Neurospora crassa	28.81	1.00e-17	83.20
IUUC-Ont-071435	Oreochromis niloticus	30.37	9.00e-43	166.00
IUUC-Oba-075873	Oryza barthii	48.29	5.00e-86	310.00
IUUC-Obr-076664	Oryza brachyantha	55.26	4.00e-42	163.00
IUUC-Ogl-077840	Oryza glaberrima	48.12	3.00e-86	310.00
IUUC-Ogu-077988	Oryza glumaepatula	48.29	5.00e-86	310.00
IUUC-Oin-079237	Oryza indica	51.42	3.00e-55	207.00
IUUC-Olo-080415	Oryza longistaminata	47.40	7.00e-74	271.00
IUUC-Ome-081952	Oryza meridionalis	47.81	1.00e-84	305.00
IUUC-Oni-082300	Oryza nivara	48.29	5.00e-86	310.00
IUUC-Opu-083436	Oryza punctata	51.44	3.00e-52	198.00
IUUC-Oru-085164	Oryza rufipogon	48.29	2.00e-85	308.00
IUUC-Osa-086129	Oryza sativa	48.44	7.00e-86	309.00
IUUC-Ola-086571	Oryzias latipes	31.73	4.00e-41	160.00
IUUC-Oar-090131	Ovis aries	35.21	6.00e-34	137.00
IUUC-Ptr-091301	Pan troglodytes	29.85	3.00e-25	107.00
IUUC-Pan-092810	Papio anubis	35.47	1.00e-39	155.00
IUUC-Psi-093091	Pelodiscus sinensis	34.23	6.00e-33	133.00
IUUC-Pno-095047	Phaeosphaeria nodorum	26.72	9.00e-17	80.50
IUUC-Ppa-095317	Physcomitrella patens	46.88	1.00e-76	279.00
IUUC-Pfo-096996	Poecilia formosa	30.92	3.00e-41	161.00
IUUC-Pop-099609	Populus trichocarpa	49.89	4.00e-123	433.00
IUUC-Pca-100972	Procavia capensis	32.81	3.00e-31	128.00
IUUC-Ppe-101904	Prunus persica	49.89	6.00e-118	416.00
IUUC-Pgr-103616	Puccinia graminis	33.33	5.00e-22	98.20
IUUC-Ptt-103954	Puccinia triticina	35.00	4.00e-22	98.20
IUUC-Pte-104120	Pyrenophora teres	28.57	6.00e-24	104.00
IUUC-Pyt-104558	Pyrenophora triticirepentis	28.57	3.00e-24	105.00
IUUC-Rno-104933	Rattus norvegicus	35.77	1.00e-43	169.00
IUUC-Sha-107636	Sarcophilus harrisii	38.55	4.00e-43	167.00
IUUC-Spo-108192	Schizosaccharomyces pombe	29.18	1.00e-24	106.00
IUUC-Smo-109498	Selaginella moellendorffii	48.45	3.00e-101	360.00
IUUC-Sit-110770	Setaria italica	49.01	2.00e-80	291.00
IUUC-Sly-111453	Solanum lycopersicum	52.49	1.00e-129	455.00
IUUC-Stu-112384	Solanum tuberosum	50.12	6.00e-112	396.00
IUUC-Sbi-113952	Sorghum bicolor	40.42	1.00e-80	292.00
IUUC-Sre-115223	Sporisorium reilianum	33.82	1.00e-23	103.00
IUUC-Tgu-117404	Taeniopygia guttata	37.15	3.00e-42	164.00
IUUC-Tru-117629	Takifugu rubripes	34.62	3.00e-40	157.00
IUUC-Tni-119839	Tetraodon nigroviridis	33.77	2.00e-31	129.00
IUUC-Tca-121766	Theobroma cacao	51.20	2.00e-124	437.00
IUUC-Tae-125634	Triticum aestivum	39.02	1.00e-75	275.00
IUUC-Tur-126673	Triticum urartu	37.22	2.00e-63	235.00
IUUC-Tbe-127452	Tupaia belangeri	41.67	3.00e-14	71.60
IUUC-Uma-129521	Ustilago maydis	33.00	2.00e-22	99.40
IUUC-Vvi-130872	Vitis vinifera	54.63	4.00e-128	449.00
IUUC-Xma-134106	Xiphophorus maculatus	35.49	2.00e-37	148.00
IUUC-Yli-134551	Yarrowia lipolytica	28.53	6.00e-21	94.00
IUUC-Zma-134703	Zea mays	39.53	3.00e-80	291.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence