iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095447

Ensembl Protein ID

PP1S53_78V6.1

UniProt Accession

A9S740; A9S740_PHYPA

Genbank Protein ID

EDQ72932.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544942

Gene Name

PHYPADRAFT_163200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S53_78V6	PP1S53_78V6.1	PP1S53_78V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-10	41.8	3481	3513

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrt 32
           H+  v cla   +  l+vsGs D t+  WDl++
   Q: 3481 HSQAVLCLAVsqPYSLIVSGSKDRTVIFWDLSS 3513
           999*******864489**************976 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MKWLERFKEK VSQTSFSPTS PQARLSRQCS EDGITRPREK DDLEQDFRSA WEDFRSSITE 60
KEKEKALDVT VSLFCKVARQ SSDPTRLALS LVDIRSFAFV VARALVTEIK KLREDGANGQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAATGGC TTGAGCGTTT CAAAGAGAAA GTGAGTCAGA CCTCATTCTC TCCAACAAGC 60
CCTCAGGCAA GGCTATCACG TCAGTGCTCT GAAGATGGAA TCACTAGACC CAGGTATTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR000306--Znf_FYVE
IPR017455--Znf_FYVE-rel
IPR011011--Znf_FYVE_PHD
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50178--ZF_FYVE

Pfam

PF02138--Beach
PF01363--FYVE
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00064--FYVE
SM00320--WD40

Gene Ontology

GO:0046872--F:metal ion binding

KEGG

ppp:PHYPADRAFT_163200

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000317	Aegilops tauschii	47.83	0.00e+00	2860.00
IUUC-Atr-002879	Amborella trichopoda	50.75	0.00e+00	3085.00
IUUC-Aca-005386	Anolis carolinensis	37.48	3.00e-180	627.00
IUUC-Aly-005640	Arabidopsis lyrata	49.83	0.00e+00	3053.00
IUUC-Ath-007645	Arabidopsis thaliana	49.60	0.00e+00	3023.00
IUUC-Ame-011607	Astyanax mexicanus	42.77	2.00e-175	610.00
IUUC-Bta-012997	Bos taurus	37.05	6.00e-177	615.00
IUUC-Bdi-015031	Brachypodium distachyon	48.56	0.00e+00	2907.00
IUUC-Bol-015656	Brassica oleracea	49.06	0.00e+00	2978.00
IUUC-Bra-017449	Brassica rapa	56.94	0.00e+00	1535.00
IUUC-Dor-030745	Dipodomys ordii	36.73	2.00e-107	384.00
IUUC-Fca-036304	Felis catus	37.01	9.00e-177	615.00
IUUC-Gmo-039503	Gadus morhua	42.67	7.00e-176	612.00
IUUC-Gga-041220	Gallus gallus	36.11	5.00e-143	503.00
IUUC-Gac-041618	Gasterosteus aculeatus	38.36	0.00e+00	636.00
IUUC-Gma-042724	Glycine max	50.01	0.00e+00	3030.00
IUUC-Hvu-047814	Hordeum vulgare	48.78	0.00e+00	2959.00
IUUC-Lpe-050828	Leersia perrieri	48.82	0.00e+00	2940.00
IUUC-Loc-052434	Lepisosteus oculatus	37.35	2.00e-178	620.00
IUUC-Laf-054408	Loxodonta africana	36.89	3.00e-175	610.00
IUUC-Meu-056743	Macropus eugenii	55.40	6.00e-116	413.00
IUUC-Mtr-058732	Medicago truncatula	49.59	0.00e+00	3013.00
IUUC-Mdo-062645	Monodelphis domestica	37.08	4.00e-180	626.00
IUUC-Mac-064551	Musa acuminata	54.76	0.00e+00	1142.00
IUUC-Ola-086856	Oryzias latipes	43.64	2.00e-178	620.00
IUUC-Psi-092951	Pelodiscus sinensis	37.67	1.00e-178	621.00
IUUC-Pfo-097102	Poecilia formosa	38.05	0.00e+00	636.00
IUUC-Pop-099807	Populus trichocarpa	49.72	0.00e+00	2977.00
IUUC-Ppe-101277	Prunus persica	50.10	0.00e+00	3085.00
IUUC-Sja-107759	Schizosaccharomyces japonicus	33.77	2.00e-126	447.00
IUUC-Spo-108108	Schizosaccharomyces pombe	34.89	1.00e-144	508.00
IUUC-Smo-109485	Selaginella moellendorffii	56.32	0.00e+00	1687.00
IUUC-Sit-110811	Setaria italica	49.17	0.00e+00	2866.00
IUUC-Sly-110936	Solanum lycopersicum	50.30	0.00e+00	2947.00
IUUC-Sbi-114421	Sorghum bicolor	48.70	0.00e+00	2852.00
IUUC-Sre-115137	Sporisorium reilianum	33.06	6.00e-125	442.00
IUUC-Ssc-116100	Sus scrofa	37.21	1.00e-179	624.00
IUUC-Tsy-119315	Tarsius syrichta	37.09	2.00e-174	607.00
IUUC-Tca-121423	Theobroma cacao	50.73	0.00e+00	3113.00
IUUC-Tur-126221	Triticum urartu	47.65	0.00e+00	2801.00
IUUC-Xtr-132689	Xenopus tropicalis	38.18	5.00e-180	626.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence