iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000012131.2	ENSLACT00000024912.1	ENSLACP00000023342.1
ENSLACG00000012131.2	ENSLACT00000013875.1	ENSLACP00000013778.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.10e-07	29.4	489	522

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf....sdtllvsGsdDgtikvWDlrtg 33
           +++vt+l+f    +  ll++G +Dgt+ ++++ ++
   Q: 489  ESGVTALDFseasP-SLLAVGLYDGTVAICNVQSN 522
           578******99743.89999***********9776 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MSIFPSKTKK PNPLAKVPSK ISGSMRKMSV VSESQSRTSY MNRSTIGFSS RRSLGVYADS 60
KIMDKSSALS SKHTYQIFDD SGKDVTPQPL FHLDPNTIHP KQSKLFSSQD ATVAHGSEML 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAACACAAC CTGAAAACCA GGGAAGTTTT CAAATTGAAG TTGGGGAGAA AAGTTTAGCT 60
CGCCTATTGC TTATCATAGA TATAATTTCT ACGATATATA TATATATATA TATATATATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

lcm:102351505

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002359	Ailuropoda melanoleuca	53.09	0.00e+00	731.00
IUUC-Apl-004037	Anas platyrhynchos	53.92	0.00e+00	766.00
IUUC-Aca-004686	Anolis carolinensis	51.15	0.00e+00	759.00
IUUC-Ame-010641	Astyanax mexicanus	51.38	0.00e+00	700.00
IUUC-Bta-012779	Bos taurus	51.75	0.00e+00	764.00
IUUC-Cja-019217	Callithrix jacchus	52.86	0.00e+00	783.00
IUUC-Cfa-020613	Canis familiaris	51.15	0.00e+00	744.00
IUUC-Cpo-022374	Cavia porcellus	53.28	0.00e+00	758.00
IUUC-Cre-022690	Chlamydomonas reinhardtii	42.32	7.00e-78	285.00
IUUC-Csa-023471	Chlorocebus sabaeus	52.55	0.00e+00	778.00
IUUC-Cho-024485	Choloepus hoffmanni	47.48	0.00e+00	630.00
IUUC-Cin-025295	Ciona intestinalis	47.28	0.00e+00	670.00
IUUC-Csv-025888	Ciona savignyi	48.82	0.00e+00	674.00
IUUC-Dre-027657	Danio rerio	49.94	0.00e+00	736.00
IUUC-Dno-029422	Dasypus novemcinctus	51.14	0.00e+00	679.00
IUUC-Dor-030738	Dipodomys ordii	34.66	2.00e-61	230.00
IUUC-Dme-032178	Drosophila melanogaster	32.23	8.00e-54	205.00
IUUC-Ete-032340	Echinops telfairi	49.54	1.00e-83	304.00
IUUC-Eca-033418	Equus caballus	52.93	0.00e+00	729.00
IUUC-Eeu-035088	Erinaceus europaeus	56.40	1.00e-63	237.00
IUUC-Fca-035471	Felis catus	52.29	0.00e+00	714.00
IUUC-Fal-036908	Ficedula albicollis	48.47	2.00e-163	569.00
IUUC-Gmo-038672	Gadus morhua	42.47	1.00e-87	317.00
IUUC-Gga-040422	Gallus gallus	47.06	0.00e+00	720.00
IUUC-Gac-042448	Gasterosteus aculeatus	42.76	8.00e-167	580.00
IUUC-Ggo-045567	Gorilla gorilla	54.43	0.00e+00	749.00
IUUC-Hsa-046857	Homo sapiens	56.23	0.00e+00	771.00
IUUC-Itr-048176	Ictidomys tridecemlineatus	60.83	2.00e-168	584.00
IUUC-Loc-052759	Lepisosteus oculatus	64.22	0.00e+00	918.00
IUUC-Laf-053515	Loxodonta africana	52.80	0.00e+00	777.00
IUUC-Mcc-054741	Macaca mulatta	56.19	0.00e+00	786.00
IUUC-Meu-056698	Macropus eugenii	67.02	4.00e-122	431.00
IUUC-Mga-059689	Meleagris gallopavo	51.01	0.00e+00	705.00
IUUC-Mmr-061641	Microcebus murinus	52.20	2.00e-165	575.00
IUUC-Mdo-061968	Monodelphis domestica	53.90	0.00e+00	781.00
IUUC-Mmu-063908	Mus musculus	53.60	0.00e+00	727.00
IUUC-Mpu-065957	Mustela putorius furo	53.03	0.00e+00	719.00
IUUC-Mlu-067454	Myotis lucifugus	52.39	0.00e+00	765.00
IUUC-Nle-069312	Nomascus leucogenys	56.00	0.00e+00	785.00
IUUC-Opr-070363	Ochotona princeps	52.78	1.00e-143	504.00
IUUC-Ont-072322	Oreochromis niloticus	41.86	1.00e-166	579.00
IUUC-Oan-073666	Ornithorhynchus anatinus	56.05	0.00e+00	796.00
IUUC-Ocu-074719	Oryctolagus cuniculus	54.09	0.00e+00	813.00
IUUC-Ola-087351	Oryzias latipes	47.90	1.00e-85	309.00
IUUC-Olu-087835	Ostreococcus lucimarinus	30.30	3.00e-43	169.00
IUUC-Oga-088476	Otolemur garnettii	53.73	0.00e+00	728.00
IUUC-Oar-089261	Ovis aries	53.03	0.00e+00	737.00
IUUC-Ptr-091329	Pan troglodytes	33.74	7.00e-64	238.00
IUUC-Pan-091774	Papio anubis	56.17	0.00e+00	785.00
IUUC-Psi-093526	Pelodiscus sinensis	59.05	0.00e+00	881.00
IUUC-Pma-094755	Petromyzon marinus	52.00	1.00e-73	269.00
IUUC-Ppa-095355	Physcomitrella patens	46.11	2.00e-43	169.00
IUUC-Pfo-096510	Poecilia formosa	39.73	3.00e-139	488.00
IUUC-Pab-098218	Pongo abelii	56.09	0.00e+00	771.00
IUUC-Pca-100350	Procavia capensis	32.76	9.00e-54	204.00
IUUC-Pva-102551	Pteropus vampyrus	62.33	6.00e-133	468.00
IUUC-Rno-105674	Rattus norvegicus	50.44	0.00e+00	743.00
IUUC-Sha-107552	Sarcophilus harrisii	52.11	0.00e+00	759.00
IUUC-Smo-109353	Selaginella moellendorffii	44.44	1.00e-73	269.00
IUUC-Sar-113136	Sorex araneus	48.41	4.00e-179	621.00
IUUC-Ssc-116203	Sus scrofa	55.78	0.00e+00	676.00
IUUC-Tgu-117141	Taeniopygia guttata	48.05	4.00e-167	581.00
IUUC-Tru-118061	Takifugu rubripes	31.60	3.00e-54	206.00
IUUC-Tni-119670	Tetraodon nigroviridis	36.18	3.00e-110	392.00
IUUC-Tbe-127913	Tupaia belangeri	54.96	2.00e-147	516.00
IUUC-Ttr-128515	Tursiops truncatus	49.46	0.00e+00	663.00
IUUC-Vpa-130560	Vicugna pacos	58.59	3.00e-130	459.00
IUUC-Xtr-131755	Xenopus tropicalis	55.04	0.00e+00	853.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence