iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-047876

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01095326

Gene Name

THOC6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000010100.2	ENSSTOT00000010104.2	ENSSTOP00000009064.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-12	47.0	166	204

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gHtd ++cla+   ++ ++sG+ Dg +++WDlrt + ++
   Q: 166  GHTDYIHCLALreRSPEVLSGGEDGAVRLWDLRTVREVQ 204
           8**********98559*****************988877 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MERAAPLAVP LGQTEVFQAL QRLHMTIFSQ SVSPCGKFLA AGNNYGQIAI FSLSAALSSE 60
AKEESKKPVV TFQAHDGPVY SMVSTDRHLL SAGDGEVKAW LWAEILKKGC KELWRRQPPY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTAGTTCCTG CGATGGAGCG CGCTGCCCCG CTAGCGGTGC CTCTGGGTCA GGTGAGTGGG 60
TTTTGTGCGC GGTGCCTTAT GGGGTTTGTA GTCCATGCTT TGCTTGAATG GGATGGACAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000784--C:nuclear chromosome, telomeric region
GO:0016607--C:nuclear speck
GO:0000445--C:THO complex part of transcription export complex
GO:0007417--P:central nervous system development
GO:0043066--P:negative regulation of apoptotic process
GO:0046784--P:viral mRNA export from host cell nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001101	Aegilops tauschii	29.17	5.00e-29	121.00
IUUC-Aml-001693	Ailuropoda melanoleuca	95.89	2.00e-179	621.00
IUUC-Atr-002699	Amborella trichopoda	29.20	4.00e-23	102.00
IUUC-Aca-004231	Anolis carolinensis	71.25	5.00e-128	450.00
IUUC-Aly-006385	Arabidopsis lyrata	29.82	2.00e-27	115.00
IUUC-Ath-006723	Arabidopsis thaliana	29.55	2.00e-27	116.00
IUUC-Ame-010813	Astyanax mexicanus	65.12	4.00e-89	320.00
IUUC-Bta-013458	Bos taurus	95.89	4.00e-179	620.00
IUUC-Bdi-014935	Brachypodium distachyon	28.82	7.00e-29	120.00
IUUC-Bol-015442	Brassica oleracea	29.39	1.00e-27	117.00
IUUC-Bra-017807	Brassica rapa	30.41	1.00e-28	120.00
IUUC-Cja-019061	Callithrix jacchus	96.49	5.00e-180	622.00
IUUC-Cfa-021146	Canis familiaris	96.19	3.00e-180	623.00
IUUC-Cpo-022512	Cavia porcellus	96.77	0.00e+00	629.00
IUUC-Csa-023055	Chlorocebus sabaeus	95.89	0.00e+00	627.00
IUUC-Cho-024693	Choloepus hoffmanni	96.39	8.00e-100	355.00
IUUC-Cin-025181	Ciona intestinalis	35.71	1.00e-56	212.00
IUUC-Csv-025852	Ciona savignyi	34.33	2.00e-48	185.00
IUUC-Dre-028221	Danio rerio	61.18	9.00e-121	426.00
IUUC-Dno-029200	Dasypus novemcinctus	92.59	1.00e-89	321.00
IUUC-Dor-030863	Dipodomys ordii	95.01	2.00e-178	617.00
IUUC-Dme-032016	Drosophila melanogaster	28.75	8.00e-38	150.00
IUUC-Eca-034363	Equus caballus	96.48	0.00e+00	627.00
IUUC-Fca-036546	Felis catus	96.48	0.00e+00	626.00
IUUC-Gmo-038513	Gadus morhua	57.66	1.00e-109	389.00
IUUC-Gac-042606	Gasterosteus aculeatus	58.39	1.00e-113	402.00
IUUC-Gma-043171	Glycine max	28.19	6.00e-32	130.00
IUUC-Ggo-044877	Gorilla gorilla	97.07	0.00e+00	632.00
IUUC-Hsa-045813	Homo sapiens	97.07	0.00e+00	632.00
IUUC-Hvu-047782	Hordeum vulgare	29.79	6.00e-20	90.10
IUUC-Lch-049506	Latimeria chalumnae	64.44	7.00e-120	423.00
IUUC-Lpe-051203	Leersia perrieri	29.28	4.00e-24	105.00
IUUC-Loc-052451	Lepisosteus oculatus	51.84	2.00e-90	325.00
IUUC-Laf-053864	Loxodonta africana	94.72	6.00e-177	612.00
IUUC-Mcc-055705	Macaca mulatta	88.32	4.00e-154	536.00
IUUC-Meu-055926	Macropus eugenii	90.83	2.00e-156	544.00
IUUC-Mtr-058556	Medicago truncatula	28.83	6.00e-32	130.00
IUUC-Mmr-060836	Microcebus murinus	96.48	0.00e+00	628.00
IUUC-Mdo-062534	Monodelphis domestica	90.83	2.00e-155	541.00
IUUC-Mmu-063560	Mus musculus	95.31	5.00e-179	619.00
IUUC-Mac-065134	Musa acuminata	27.08	7.00e-26	111.00
IUUC-Mpu-066031	Mustela putorius furo	97.36	0.00e+00	630.00
IUUC-Mlu-068051	Myotis lucifugus	92.38	2.00e-170	591.00
IUUC-Nle-069080	Nomascus leucogenys	96.48	0.00e+00	627.00
IUUC-Opr-070787	Ochotona princeps	90.62	7.00e-167	579.00
IUUC-Ont-071952	Oreochromis niloticus	57.14	6.00e-112	397.00
IUUC-Oan-073334	Ornithorhynchus anatinus	86.92	2.00e-119	421.00
IUUC-Oba-075175	Oryza barthii	28.96	4.00e-25	108.00
IUUC-Obr-076393	Oryza brachyantha	29.41	7.00e-25	107.00
IUUC-Ogl-077603	Oryza glaberrima	34.75	3.00e-18	85.10
IUUC-Ogu-078211	Oryza glumaepatula	28.96	5.00e-25	108.00
IUUC-Oin-079554	Oryza indica	28.96	2.00e-25	108.00
IUUC-Olo-080922	Oryza longistaminata	31.85	1.00e-22	100.00
IUUC-Ome-081127	Oryza meridionalis	23.98	9.00e-13	68.20
IUUC-Oni-082376	Oryza nivara	28.96	5.00e-25	108.00
IUUC-Opu-083163	Oryza punctata	28.51	2.00e-24	106.00
IUUC-Oru-084311	Oryza rufipogon	28.96	6.00e-25	107.00
IUUC-Osa-085762	Oryza sativa	34.75	4.00e-18	84.70
IUUC-Oga-088804	Otolemur garnettii	94.72	9.00e-179	618.00
IUUC-Oar-090095	Ovis aries	95.31	3.00e-178	617.00
IUUC-Ptr-090731	Pan troglodytes	97.36	0.00e+00	632.00
IUUC-Pan-092595	Papio anubis	96.49	0.00e+00	625.00
IUUC-Psi-093866	Pelodiscus sinensis	71.19	8.00e-119	419.00
IUUC-Pma-094236	Petromyzon marinus	60.19	2.00e-117	414.00
IUUC-Pfo-096095	Poecilia formosa	57.14	1.00e-107	382.00
IUUC-Pab-098385	Pongo abelii	96.48	0.00e+00	630.00
IUUC-Pop-099433	Populus trichocarpa	26.85	1.00e-28	120.00
IUUC-Pca-101119	Procavia capensis	94.52	2.00e-115	408.00
IUUC-Ppe-101677	Prunus persica	28.23	2.00e-26	112.00
IUUC-Pva-102726	Pteropus vampyrus	95.89	5.00e-180	622.00
IUUC-Rno-105576	Rattus norvegicus	95.60	2.00e-179	621.00
IUUC-Sha-106774	Sarcophilus harrisii	91.44	3.00e-157	546.00
IUUC-Sit-109988	Setaria italica	27.78	3.00e-27	115.00
IUUC-Sly-110864	Solanum lycopersicum	29.37	8.00e-28	117.00
IUUC-Sar-113060	Sorex araneus	87.45	7.00e-129	452.00
IUUC-Sbi-114699	Sorghum bicolor	27.87	8.00e-28	117.00
IUUC-Ssc-116445	Sus scrofa	97.07	0.00e+00	630.00
IUUC-Tru-117834	Takifugu rubripes	59.01	6.00e-116	409.00
IUUC-Tni-119651	Tetraodon nigroviridis	58.07	6.00e-115	406.00
IUUC-Tca-121318	Theobroma cacao	26.61	5.00e-27	114.00
IUUC-Tae-124184	Triticum aestivum	29.17	5.00e-29	121.00
IUUC-Tur-126226	Triticum urartu	29.41	4.00e-26	111.00
IUUC-Tbe-128079	Tupaia belangeri	80.15	5.00e-106	376.00
IUUC-Ttr-128391	Tursiops truncatus	92.11	3.00e-169	587.00
IUUC-Vvi-131148	Vitis vinifera	26.61	5.00e-24	104.00
IUUC-Xtr-132743	Xenopus tropicalis	62.91	2.00e-118	418.00
IUUC-Xma-133722	Xiphophorus maculatus	57.45	2.00e-112	398.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence