iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gma-043598

Ensembl Protein ID

GLYMA13G32840.1

UniProt Accession

I1M2L4; I1M2L4_SOYBN

Genbank Protein ID

KRH21727.1; KRH21728.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000846; CM000846

Gene Name

LOC100806692; GLYMA_13G255400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA13G32840	GLYMA13G32840.1	GLYMA13G32840.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-14	53.9	380	415

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           + +++laf  ++  l+sG++Dg+++ WDlrt ++l+
   Q: 380  GTIRSLAFaeNGQKLLSGGGDGQVYHWDLRTMTCLH 415
           689******87799*****************99987 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSLISQNAST KNVVNKSKRE VEDDVENSDT LKVKKKKKYD EGEQLAMEQV KEMKKLENFL 60
FGSLYSPLEF GKEEDEVEPP KAAEKVSDLF FTDRSADSVL TVYREEDADL SEGSHDDDDR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAATCCGTCT AGCCCAAGAC AAAAAGCCCA ATCCATTTGC TAAAACCCTT GGGGCAGTTT 60
TTCTCTCCTC TCTTAAACCT AAAACCGTAA AACGTCTCCG TCGTCCCTCT CACTCAGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

gmx:100806692

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000184	Aegilops tauschii	61.58	0.00e+00	634.00
IUUC-Aml-002252	Ailuropoda melanoleuca	36.64	3.00e-75	275.00
IUUC-Aly-006512	Arabidopsis lyrata	65.86	0.00e+00	648.00
IUUC-Ath-007244	Arabidopsis thaliana	67.06	0.00e+00	668.00
IUUC-Afl-008445	Aspergillus flavus	29.49	5.00e-54	205.00
IUUC-Aor-009986	Aspergillus oryzae	29.13	5.00e-53	202.00
IUUC-Bta-013058	Bos taurus	38.31	1.00e-79	290.00
IUUC-Bci-013619	Botrytis cinerea	28.14	1.00e-50	194.00
IUUC-Bdi-014771	Brachypodium distachyon	55.75	1.00e-172	599.00
IUUC-Bol-015230	Brassica oleracea	61.37	4.00e-180	624.00
IUUC-Bra-017041	Brassica rapa	59.75	7.00e-175	606.00
IUUC-Cel-018293	Caenorhabditis elegans	27.05	2.00e-46	179.00
IUUC-Cja-019503	Callithrix jacchus	37.92	3.00e-77	282.00
IUUC-Cfa-020743	Canis familiaris	36.64	8.00e-77	281.00
IUUC-Cpo-021488	Cavia porcellus	42.11	2.00e-72	266.00
IUUC-Csa-023110	Chlorocebus sabaeus	34.90	5.00e-75	275.00
IUUC-Cin-025208	Ciona intestinalis	36.47	3.00e-67	248.00
IUUC-Cme-027351	Cyanidioschyzon merolae	32.36	1.00e-58	221.00
IUUC-Dno-029243	Dasypus novemcinctus	36.02	5.00e-75	275.00
IUUC-Dor-030110	Dipodomys ordii	41.94	8.00e-73	268.00
IUUC-Dme-031999	Drosophila melanogaster	30.91	4.00e-48	185.00
IUUC-Eca-034350	Equus caballus	36.87	1.00e-75	277.00
IUUC-Eeu-034991	Erinaceus europaeus	35.54	1.00e-71	264.00
IUUC-Fal-036614	Ficedula albicollis	41.34	8.00e-72	264.00
IUUC-Gmo-039183	Gadus morhua	38.86	2.00e-72	266.00
IUUC-Gga-040922	Gallus gallus	38.60	3.00e-78	285.00
IUUC-Gac-041475	Gasterosteus aculeatus	36.30	7.00e-70	258.00
IUUC-Ggo-044517	Gorilla gorilla	37.82	2.00e-76	280.00
IUUC-Hsa-045741	Homo sapiens	37.82	3.00e-76	279.00
IUUC-Itr-048128	Ictidomys tridecemlineatus	37.17	1.00e-78	286.00
IUUC-Kpa-049335	Komagataella pastoris	32.99	4.00e-62	232.00
IUUC-Lch-049816	Latimeria chalumnae	36.81	2.00e-74	273.00
IUUC-Lpe-051140	Leersia perrieri	60.97	2.00e-171	595.00
IUUC-Laf-054245	Loxodonta africana	37.86	2.00e-76	279.00
IUUC-Meu-056300	Macropus eugenii	35.56	1.00e-59	223.00
IUUC-Mmu-063386	Mus musculus	36.16	9.00e-74	271.00
IUUC-Mpu-066084	Mustela putorius furo	37.31	4.00e-73	269.00
IUUC-Mlu-068130	Myotis lucifugus	35.61	5.00e-75	275.00
IUUC-Nle-069743	Nomascus leucogenys	34.01	3.00e-63	236.00
IUUC-Opr-071111	Ochotona princeps	41.69	3.00e-73	269.00
IUUC-Ont-071979	Oreochromis niloticus	35.73	5.00e-74	271.00
IUUC-Ocu-073754	Oryctolagus cuniculus	37.17	8.00e-77	281.00
IUUC-Oba-075007	Oryza barthii	61.37	3.00e-173	601.00
IUUC-Obr-076447	Oryza brachyantha	60.76	1.00e-175	609.00
IUUC-Ogl-077733	Oryza glaberrima	61.17	2.00e-173	602.00
IUUC-Ogu-078828	Oryza glumaepatula	61.17	7.00e-174	603.00
IUUC-Oin-080152	Oryza indica	61.17	8.00e-174	603.00
IUUC-Olo-080983	Oryza longistaminata	60.56	2.00e-171	595.00
IUUC-Oni-082443	Oryza nivara	61.37	1.00e-173	602.00
IUUC-Opu-083771	Oryza punctata	60.20	2.00e-169	588.00
IUUC-Oru-084272	Oryza rufipogon	61.17	1.00e-173	603.00
IUUC-Osa-085885	Oryza sativa	61.37	5.00e-176	610.00
IUUC-Olu-087644	Ostreococcus lucimarinus	26.38	1.00e-31	130.00
IUUC-Oga-088834	Otolemur garnettii	37.75	7.00e-77	281.00
IUUC-Oar-089712	Ovis aries	37.86	2.00e-79	290.00
IUUC-Pan-092561	Papio anubis	37.12	2.00e-74	273.00
IUUC-Ppa-095397	Physcomitrella patens	53.08	9.00e-128	450.00
IUUC-Pfo-097068	Poecilia formosa	35.58	4.00e-74	272.00
IUUC-Pop-099471	Populus trichocarpa	75.69	0.00e+00	713.00
IUUC-Pva-102851	Pteropus vampyrus	34.97	4.00e-69	255.00
IUUC-Rno-104910	Rattus norvegicus	36.78	6.00e-75	275.00
IUUC-Sce-106258	Saccharomyces cerevisiae	31.00	5.00e-54	205.00
IUUC-Smo-108815	Selaginella moellendorffii	47.23	6.00e-133	467.00
IUUC-Sly-111533	Solanum lycopersicum	69.58	0.00e+00	697.00
IUUC-Stu-112853	Solanum tuberosum	70.95	0.00e+00	707.00
IUUC-Sbi-114747	Sorghum bicolor	57.42	0.00e+00	645.00
IUUC-Ssc-115916	Sus scrofa	37.75	2.00e-77	283.00
IUUC-Tgu-117291	Taeniopygia guttata	40.12	8.00e-71	261.00
IUUC-Tru-118724	Takifugu rubripes	38.64	7.00e-74	271.00
IUUC-Tsy-118928	Tarsius syrichta	43.93	3.00e-50	192.00
IUUC-Tca-121229	Theobroma cacao	70.19	0.00e+00	774.00
IUUC-Tae-123641	Triticum aestivum	61.02	0.00e+00	638.00
IUUC-Tur-126082	Triticum urartu	47.45	2.00e-97	349.00
IUUC-Ttr-128904	Tursiops truncatus	42.29	1.00e-61	231.00
IUUC-Vpa-130817	Vicugna pacos	37.19	2.00e-78	286.00
IUUC-Vvi-130982	Vitis vinifera	71.43	0.00e+00	760.00
IUUC-Xma-133391	Xiphophorus maculatus	35.20	1.00e-71	263.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence