iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-021664

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02048526

Gene Name

WDR41

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000001183.3	ENSCPOT00000001195.2	ENSCPOP00000001067.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.60e-20	70.2	82	126

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.f........sdtllvsGsdDgtikvWDlrtgvll 36
           gHt ++t++  f         + l++++s D t+ vWD +tg ++
   Q: 82   GHTQKITAITtFpslksceeKNQLILTASADRTVIVWDCDTGSQV 126
           8*******9769999998764488*****************9887 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MLRWLIGGGR EPQGLAEKSP LQTVGEEQSR NPYTELLVLK AHHDIVRFLV QLDGSRFASA 60
GDDGIVIVWN AQTGEKLLEL SGHTQKITAI TTFPSLKSCE EKNQLILTAS ADRTVIVWDC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGCGCT GGCTGATCGG GGGAGGCCGC GAGCCCCAGG GCCTGGCCGA GGTGAGCGCC 60
GGCAGCCACT GCTCAGCGGA GTAGGGCAGG ACCGGGCGGT GCGCGGGCTG GGGGCGGGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032045--C:guanyl-nucleotide exchange factor complex
GO:0005765--C:lysosomal membrane
GO:0017112--F:Rab guanyl-nucleotide exchange factor activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001900	Ailuropoda melanoleuca	87.42	0.00e+00	844.00
IUUC-Apl-004087	Anas platyrhynchos	73.82	0.00e+00	628.00
IUUC-Aca-005359	Anolis carolinensis	70.61	0.00e+00	671.00
IUUC-Ame-010669	Astyanax mexicanus	42.38	1.00e-75	276.00
IUUC-Bta-013534	Bos taurus	86.84	0.00e+00	833.00
IUUC-Cja-019219	Callithrix jacchus	89.74	0.00e+00	836.00
IUUC-Cfa-020310	Canis familiaris	87.10	0.00e+00	814.00
IUUC-Csa-024228	Chlorocebus sabaeus	90.39	0.00e+00	869.00
IUUC-Cho-024898	Choloepus hoffmanni	84.30	6.00e-112	397.00
IUUC-Dre-028538	Danio rerio	55.80	5.00e-131	461.00
IUUC-Dno-028861	Dasypus novemcinctus	85.68	0.00e+00	827.00
IUUC-Dor-030111	Dipodomys ordii	88.65	0.00e+00	853.00
IUUC-Ete-032444	Echinops telfairi	86.52	2.00e-161	561.00
IUUC-Eca-033676	Equus caballus	86.84	0.00e+00	831.00
IUUC-Eeu-034571	Erinaceus europaeus	78.99	0.00e+00	744.00
IUUC-Fca-035387	Felis catus	88.07	0.00e+00	846.00
IUUC-Fal-037310	Ficedula albicollis	72.83	0.00e+00	669.00
IUUC-Gmo-039224	Gadus morhua	53.46	2.00e-129	455.00
IUUC-Gga-040957	Gallus gallus	73.35	0.00e+00	675.00
IUUC-Gac-042385	Gasterosteus aculeatus	54.82	9.00e-141	493.00
IUUC-Ggo-044973	Gorilla gorilla	90.24	0.00e+00	863.00
IUUC-Hsa-046842	Homo sapiens	90.39	0.00e+00	868.00
IUUC-Itr-048784	Ictidomys tridecemlineatus	90.99	5.00e-178	616.00
IUUC-Lch-049625	Latimeria chalumnae	62.64	5.00e-172	597.00
IUUC-Loc-052368	Lepisosteus oculatus	58.77	4.00e-153	534.00
IUUC-Laf-053678	Loxodonta africana	87.31	0.00e+00	838.00
IUUC-Mcc-055184	Macaca mulatta	89.86	0.00e+00	834.00
IUUC-Meu-056165	Macropus eugenii	74.43	0.00e+00	685.00
IUUC-Mga-060184	Meleagris gallopavo	70.25	8.00e-61	225.00
IUUC-Mmr-060965	Microcebus murinus	89.32	0.00e+00	853.00
IUUC-Mdo-062702	Monodelphis domestica	82.86	0.00e+00	806.00
IUUC-Mmu-063649	Mus musculus	80.42	5.00e-117	414.00
IUUC-Mpu-065747	Mustela putorius furo	87.50	0.00e+00	843.00
IUUC-Mlu-067873	Myotis lucifugus	86.98	0.00e+00	837.00
IUUC-Nle-069670	Nomascus leucogenys	91.05	0.00e+00	868.00
IUUC-Opr-070266	Ochotona princeps	80.22	0.00e+00	761.00
IUUC-Ont-071242	Oreochromis niloticus	54.75	3.00e-139	488.00
IUUC-Oan-072879	Ornithorhynchus anatinus	81.72	0.00e+00	764.00
IUUC-Ocu-074872	Oryctolagus cuniculus	65.26	9.00e-161	559.00
IUUC-Ola-087211	Oryzias latipes	48.80	2.00e-114	405.00
IUUC-Oga-088852	Otolemur garnettii	87.99	0.00e+00	848.00
IUUC-Oar-089812	Ovis aries	86.18	0.00e+00	824.00
IUUC-Ptr-091067	Pan troglodytes	91.05	0.00e+00	872.00
IUUC-Pan-091778	Papio anubis	90.20	0.00e+00	863.00
IUUC-Psi-093932	Pelodiscus sinensis	74.66	0.00e+00	687.00
IUUC-Pfo-096845	Poecilia formosa	54.78	4.00e-136	478.00
IUUC-Pab-097892	Pongo abelii	89.37	0.00e+00	766.00
IUUC-Pca-100567	Procavia capensis	63.76	7.00e-164	570.00
IUUC-Pva-102560	Pteropus vampyrus	84.50	0.00e+00	808.00
IUUC-Rno-105662	Rattus norvegicus	84.21	0.00e+00	809.00
IUUC-Sha-107058	Sarcophilus harrisii	81.15	0.00e+00	776.00
IUUC-Sar-113643	Sorex araneus	75.79	0.00e+00	670.00
IUUC-Ssc-115791	Sus scrofa	87.34	0.00e+00	844.00
IUUC-Tgu-117145	Taeniopygia guttata	74.73	0.00e+00	681.00
IUUC-Tru-117875	Takifugu rubripes	54.82	4.00e-141	494.00
IUUC-Tsy-119030	Tarsius syrichta	89.01	0.00e+00	684.00
IUUC-Tni-119761	Tetraodon nigroviridis	53.39	3.00e-135	474.00
IUUC-Tbe-127757	Tupaia belangeri	87.25	0.00e+00	733.00
IUUC-Ttr-128762	Tursiops truncatus	89.11	0.00e+00	858.00
IUUC-Vpa-130360	Vicugna pacos	88.45	0.00e+00	852.00
IUUC-Xtr-131954	Xenopus tropicalis	62.50	1.00e-164	572.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence