iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cpo-021608

Ensembl Protein ID

ENSCPOP00000003826.2

UniProt Accession

H0V2Q1; H0V2Q1_CAVPO

Genbank Protein ID

ENSCPOP00000003826

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02028008

Gene Name

WDR19

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000004240.3	ENSCPOT00000004285.2	ENSCPOP00000003826.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-07	31.4	271	303

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH+d  t++a  ++ +  +s++ D+ ik+ Dl++
   Q: 271  GHKDNLTSIAIsQTlNKAASCG-DNCIKIHDLSE 303
           8**********87778877776.99****9*865 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

RIFTLIEKTW LGSPIQFTWQ KASGNYLAVT GADHTVKIFD RHGQKRSEIN LPGNCVVMDW 60
DKDGDILAVI AEKSTCIYLW DANTNKTSQL DNGMRDQMSF LLWSKVGSFL AVGTVKGNLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTATTTTCA CATTGATAGA GAAGACTTGG CTTGGCTCAC CAATACAGTT TACCTGGCAA 60
AAAGCATCAG GAAACTACCT TGCAGTAACA GGGTAAGAAA CCAGTGAATG TTTTAACTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0030991--C:intraciliary transport particle A
GO:0031514--C:motile cilium
GO:0005654--C:nucleoplasm
GO:0032391--C:photoreceptor connecting cilium
GO:0000902--P:cell morphogenesis
GO:0060830--P:ciliary receptor clustering involved in smoothened signaling pathway
GO:0060271--P:cilium assembly
GO:0055123--P:digestive system development
GO:0042471--P:ear morphogenesis
GO:0031076--P:embryonic camera-type eye development
GO:0048701--P:embryonic cranial skeleton morphogenesis
GO:0030326--P:embryonic limb morphogenesis
GO:0008406--P:gonad development
GO:0001701--P:in utero embryonic development
GO:0035721--P:intraciliary retrograde transport
GO:0061055--P:myotome development
GO:0050877--P:neurological system process
GO:0060831--P:smoothened signaling pathway involved in dorsal/ventral neural tube patterning

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cel-018591	Caenorhabditis elegans	39.33	0.00e+00	1009.00
IUUC-Cre-022796	Chlamydomonas reinhardtii	22.44	3.00e-13	71.20
IUUC-Dre-028191	Danio rerio	76.49	0.00e+00	2163.00
IUUC-Dme-031961	Drosophila melanogaster	40.90	0.00e+00	1064.00
IUUC-Gmo-039202	Gadus morhua	76.15	0.00e+00	985.00
IUUC-Gac-041476	Gasterosteus aculeatus	65.13	0.00e+00	1877.00
IUUC-Lch-049609	Latimeria chalumnae	77.83	0.00e+00	700.00
IUUC-Loc-052919	Lepisosteus oculatus	78.42	0.00e+00	2249.00
IUUC-Mga-060030	Meleagris gallopavo	81.55	0.00e+00	2311.00
IUUC-Mmr-060951	Microcebus murinus	24.15	6.00e-06	47.40
IUUC-Mpu-066840	Mustela putorius furo	90.58	0.00e+00	2484.00
IUUC-Oan-073422	Ornithorhynchus anatinus	75.38	0.00e+00	741.00
IUUC-Ocu-073906	Oryctolagus cuniculus	88.71	0.00e+00	2468.00
IUUC-Ola-086596	Oryzias latipes	66.47	0.00e+00	1882.00
IUUC-Pma-094497	Petromyzon marinus	21.68	2.00e-06	48.90
IUUC-Rno-105208	Rattus norvegicus	89.38	0.00e+00	2490.00
IUUC-Sha-107068	Sarcophilus harrisii	80.86	0.00e+00	2277.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence