iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000051965.5	ENSDART00000172529.1	ENSDARP00000137046.1
ENSDARG00000051965.5	ENSDART00000073689.4	ENSDARP00000068179.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.10e-09	37.7	11	79
E3 activity/RING/RING	1.10e-07	33.1	15	56

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqpl.teedlvPnltlrrliqawc 69
           e+f C+I l+++++Pv +p+G+++  s+I  + + +gk   cP++++++ +  +l  n+tl+++ +++ 
   Q: 11   EQFTCSICLDIFTNPVSTPCGHSFCSSCISSYWEGQGKtcFCPLCKESFrKRPELHVNHTLKEITEQFK 79
           68*******************************999998899*******666688*********99986 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCl+ f + p+++pCgH f+ +C+   w      + k+  CPlC+
   Q: 15   CSICLDIFTN-PVSTPCGHSFCSSCIsSYW----EGQGKTCFCPLCK 56
           **********.***************7777....45555555****6 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MSFPGEFLSE EQFTCSICLD IFTNPVSTPC GHSFCSSCIS SYWEGQGKTC FCPLCKESFR 60
KRPELHVNHT LKEITEQFKR MAETTVSVPK TATTDSPPNP FSAQKPGVQQ RPVELPKGLF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTCGTCACT TCATAGTGAA GCTGTCCTAC ACGACATACA TTGAGAGGAG CTGAACGCAG 60
CCCAAAAACA ACATCAGGGA AAAGCAAAGC ACAGACAAGA GGTTAGTTTC TAAAGCTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box
PF00097--zf-C3HC4

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding
GO:0001666--P:response to hypoxia

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011213	Astyanax mexicanus	61.62	0.00e+00	700.00
IUUC-Gac-042042	Gasterosteus aculeatus	48.54	2.00e-152	532.00
IUUC-Ont-071329	Oreochromis niloticus	52.07	3.00e-174	605.00
IUUC-Ppa-095897	Physcomitrella patens	48.00	1.00e-08	53.90
IUUC-Pfo-097223	Poecilia formosa	49.23	9.00e-156	543.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence