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Tag Content
UUCD2 ID IUUC-Pop-098787
UUCD1 version UUC-PoT-01302
Ensembl Protein ID POPTR_0011s16030.1
UniProt Accession B9I0X0; B9I0X0_POPTR
Genbank Protein ID EEE98303.1
Protein Name Transducin family protein
Genbank Nucleotide ID CM000347
Gene Name POPTRDRAFT_823135; POPTR_0011s16030g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0011s16030 POPTR_0011s16030.1 POPTR_0011s16030.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.20e-35 121.0 262 299
UBD/Beta-Prp 1.50e-52 179.7 212 511
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d+v c++f  d  +l+sG+ Dg+ikvW++rtg +l+
   Q: 262  HDDPVLCVDFsRDsEMLASGAKDGKIKVWRIRTGQCLR 299
           99*********777*********************986 PP
   

   UBD/Beta-Prp
   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkl........lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk 91
            ks   c kfspd+++l++ s dg i+vwd+ +gkl         +++  h+++v +v+fs+d+++l++g++D+ ikvw ++tg+c++ l+
   Q: 212  TKSHAECAKFSPDGQFLVSCSIDGFIEVWDYVSGKLkkdlqyqaDETFMMHDDPVLCVDFSRDSEMLASGAKDGKIKVWRIRTGQCLRRLE 302
           577889******************************888888877788889999************************************9 PP
   S: 92   .ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl...... 175
            +h++ v+sl+fs++g+ l+s+s d+t+r+  l++g+ l+  ++gh + vn + + +dg  ++++s D tv++Wd+k+ ++++t+      
   Q: 303  rAHSQGVTSLAFSRDGSQLLSASFDSTARIHGLKSGKLLK-EFRGHASYVNDAIFTSDGTRVITASSDCTVKVWDMKSTDCIHTFrppppl 392
           89**************************************.*************************************************7 PP
   S: 176  tgghtdsvysls.fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs...pnderlvsgssDgsiriWdlrsgdllktlql 262
           +g  + sv+s+  f +n  ++v + + +++ +  lq g++v+++   ++   + ++    p++e+++++++D+ i+++ ++sg+l + ++ 
   Q: 393  RG-GDASVNSVHlFPKNTDHIVVCNKTSSICIMTLQ-GQVVKSFSSGKREGGDFAAAcisPKGEWIYCVGEDRNIYCFSYQSGKLEHLMKV 481
           77.99*******999999*****************5.66888888766555555444477******************************* PP
   S: 263  hnssvisvavlsfgdnvlvlgsedskvniwk 293
           h++ vi v++ ++ +n l++ seds+ ++wk
   Q: 482  HEKDVIGVTH-HPHRNLLATYSEDSTMKLWK 511
           **********.*******************8 PP
   
Organism Populus trichocarpa
Protein Sequence
(Fasta)
MALEIEARDV IKIVLQFCKE HSLHQTFQTL QNECQVSLNT VDSIETFVAD INGGRWDTIL 60
PQVAQLKLPR NKLEDLYEQI VLEMIELREL DTARAILRQT QAMGVMKQEQ PERYLRLEHL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Pop-098787|E3,WD_repeat;UBD,Beta-Prp|Populus trichocarpa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TCTCTTTCGT CCTCTTCTTC TCCAGCAAAA TCAAAAACCC TAACACCTCC TCTCTCCCTC 60
CTCAACACAC CAAACATGGC ACTCGAAATC GAAGCTCGCG AGTAAGTTCT GCTTCCTCTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Pop-098787|E3,WD_repeat;UBD,Beta-Prp|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR006595--CTLH_C
IPR003143--Cyt_cd1_C
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40
KEGG pop:POPTR_0011s16030g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000857 Aegilops tauschii 90.97 5.00e-77 278.00
IUUC-Aml-001330 Ailuropoda melanoleuca 66.28 0.00e+00 739.00
IUUC-Atr-002570 Amborella trichopoda 88.85 0.00e+00 968.00
IUUC-Apl-003826 Anas platyrhynchos 67.00 0.00e+00 713.00
IUUC-Aca-005183 Anolis carolinensis 66.02 0.00e+00 733.00
IUUC-Aly-005632 Arabidopsis lyrata 85.35 0.00e+00 954.00
IUUC-Ath-007219 Arabidopsis thaliana 85.35 0.00e+00 948.00
IUUC-Ame-011374 Astyanax mexicanus 65.30 0.00e+00 731.00
IUUC-Bta-012890 Bos taurus 66.28 0.00e+00 739.00
IUUC-Bdi-014061 Brachypodium distachyon 84.54 0.00e+00 943.00
IUUC-Bol-016332 Brassica oleracea 85.91 0.00e+00 953.00
IUUC-Bra-017612 Brassica rapa 85.74 0.00e+00 954.00
IUUC-Cel-018238 Caenorhabditis elegans 52.35 9.00e-166 576.00
IUUC-Cja-019336 Callithrix jacchus 66.28 0.00e+00 739.00
IUUC-Cfa-021108 Canis familiaris 66.47 0.00e+00 741.00
IUUC-Cpo-022052 Cavia porcellus 66.28 0.00e+00 739.00
IUUC-Cre-022595 Chlamydomonas reinhardtii 66.02 0.00e+00 733.00
IUUC-Csa-023488 Chlorocebus sabaeus 66.28 0.00e+00 739.00
IUUC-Cho-025010 Choloepus hoffmanni 58.09 0.00e+00 632.00
IUUC-Cin-025251 Ciona intestinalis 63.95 0.00e+00 713.00
IUUC-Csv-026092 Ciona savignyi 60.89 0.00e+00 656.00
IUUC-Dre-027382 Danio rerio 65.50 0.00e+00 730.00
IUUC-Dno-029007 Dasypus novemcinctus 66.47 0.00e+00 739.00
IUUC-Dor-030180 Dipodomys ordii 56.98 2.00e-129 454.00
IUUC-Dme-031762 Drosophila melanogaster 62.77 0.00e+00 707.00
IUUC-Ete-032933 Echinops telfairi 65.35 5.00e-175 606.00
IUUC-Eca-033864 Equus caballus 66.47 0.00e+00 727.00
IUUC-Eeu-034635 Erinaceus europaeus 59.86 2.00e-153 535.00
IUUC-Fca-036119 Felis catus 66.28 0.00e+00 739.00
IUUC-Fal-037396 Ficedula albicollis 66.73 0.00e+00 720.00
IUUC-Gmo-038962 Gadus morhua 64.52 0.00e+00 721.00
IUUC-Gga-040134 Gallus gallus 66.28 0.00e+00 738.00
IUUC-Gac-041630 Gasterosteus aculeatus 64.52 0.00e+00 724.00
IUUC-Gma-043928 Glycine max 92.55 0.00e+00 1008.00
IUUC-Ggo-045061 Gorilla gorilla 66.02 0.00e+00 734.00
IUUC-Hsa-046215 Homo sapiens 66.28 0.00e+00 739.00
IUUC-Hvu-047799 Hordeum vulgare 86.39 0.00e+00 670.00
IUUC-Itr-048826 Ictidomys tridecemlineatus 66.28 0.00e+00 739.00
IUUC-Lch-050209 Latimeria chalumnae 61.28 0.00e+00 671.00
IUUC-Lpe-050740 Leersia perrieri 86.27 0.00e+00 955.00
IUUC-Loc-052739 Lepisosteus oculatus 61.27 0.00e+00 674.00
IUUC-Laf-053895 Loxodonta africana 66.15 0.00e+00 735.00
IUUC-Mcc-055183 Macaca mulatta 66.28 0.00e+00 739.00
IUUC-Mtr-057730 Medicago truncatula 90.41 0.00e+00 972.00
IUUC-Mga-059222 Meleagris gallopavo 67.22 7.00e-177 612.00
IUUC-Mmr-061749 Microcebus murinus 66.47 0.00e+00 728.00
IUUC-Mdo-062920 Monodelphis domestica 66.08 0.00e+00 738.00
IUUC-Mmu-063228 Mus musculus 66.28 0.00e+00 739.00
IUUC-Mac-065084 Musa acuminata 89.22 0.00e+00 977.00
IUUC-Mpu-066162 Mustela putorius furo 66.28 0.00e+00 739.00
IUUC-Mlu-067471 Myotis lucifugus 65.30 0.00e+00 732.00
IUUC-Nle-070129 Nomascus leucogenys 66.28 0.00e+00 739.00
IUUC-Opr-071176 Ochotona princeps 66.47 0.00e+00 727.00
IUUC-Ont-071830 Oreochromis niloticus 65.11 0.00e+00 731.00
IUUC-Oan-072778 Ornithorhynchus anatinus 66.47 0.00e+00 740.00
IUUC-Ocu-074570 Oryctolagus cuniculus 66.28 0.00e+00 739.00
IUUC-Oba-075507 Oryza barthii 86.27 0.00e+00 957.00
IUUC-Obr-076672 Oryza brachyantha 87.65 0.00e+00 968.00
IUUC-Ogl-077110 Oryza glaberrima 86.27 0.00e+00 957.00
IUUC-Ogu-077976 Oryza glumaepatula 86.27 0.00e+00 957.00
IUUC-Oin-079525 Oryza indica 86.27 0.00e+00 957.00
IUUC-Olo-080391 Oryza longistaminata 83.81 0.00e+00 946.00
IUUC-Oni-082778 Oryza nivara 86.27 0.00e+00 957.00
IUUC-Opu-083710 Oryza punctata 86.50 0.00e+00 959.00
IUUC-Oru-084250 Oryza rufipogon 86.27 0.00e+00 957.00
IUUC-Osa-085363 Oryza sativa 86.27 0.00e+00 957.00
IUUC-Ola-087092 Oryzias latipes 65.11 0.00e+00 727.00
IUUC-Olu-087753 Ostreococcus lucimarinus 53.40 1.00e-147 516.00
IUUC-Oga-088278 Otolemur garnettii 60.62 0.00e+00 657.00
IUUC-Oar-089664 Ovis aries 65.89 0.00e+00 734.00
IUUC-Ptr-090991 Pan troglodytes 66.28 0.00e+00 739.00
IUUC-Pan-092697 Papio anubis 66.28 0.00e+00 739.00
IUUC-Psi-093204 Pelodiscus sinensis 66.73 0.00e+00 721.00
IUUC-Ppa-095325 Physcomitrella patens 82.94 0.00e+00 919.00
IUUC-Pfo-096988 Poecilia formosa 65.30 0.00e+00 731.00
IUUC-Pab-098288 Pongo abelii 66.28 0.00e+00 739.00
IUUC-Pca-100583 Procavia capensis 61.90 0.00e+00 659.00
IUUC-Ppe-101307 Prunus persica 89.61 0.00e+00 986.00
IUUC-Pva-102711 Pteropus vampyrus 66.28 0.00e+00 739.00
IUUC-Rno-105614 Rattus norvegicus 66.28 0.00e+00 739.00
IUUC-Sha-107017 Sarcophilus harrisii 66.28 0.00e+00 739.00
IUUC-Smo-108800 Selaginella moellendorffii 78.32 0.00e+00 845.00
IUUC-Sit-110278 Setaria italica 86.67 0.00e+00 935.00
IUUC-Sly-111777 Solanum lycopersicum 88.63 0.00e+00 970.00
IUUC-Stu-112293 Solanum tuberosum 89.02 0.00e+00 973.00
IUUC-Sar-112955 Sorex araneus 59.34 0.00e+00 639.00
IUUC-Sbi-114802 Sorghum bicolor 87.25 0.00e+00 938.00
IUUC-Ssc-116054 Sus scrofa 66.28 0.00e+00 739.00
IUUC-Tgu-116909 Taeniopygia guttata 65.62 0.00e+00 728.00
IUUC-Tru-118195 Takifugu rubripes 65.50 0.00e+00 734.00
IUUC-Tsy-119420 Tarsius syrichta 61.01 0.00e+00 657.00
IUUC-Tni-120416 Tetraodon nigroviridis 64.91 0.00e+00 727.00
IUUC-Tca-121653 Theobroma cacao 91.41 0.00e+00 979.00
IUUC-Tae-125609 Triticum aestivum 86.08 0.00e+00 949.00
IUUC-Tur-126197 Triticum urartu 83.88 0.00e+00 674.00
IUUC-Tbe-128009 Tupaia belangeri 66.57 5.00e-139 486.00
IUUC-Ttr-128719 Tursiops truncatus 59.84 0.00e+00 655.00
IUUC-Vpa-130579 Vicugna pacos 66.08 0.00e+00 732.00
IUUC-Vvi-131127 Vitis vinifera 92.55 0.00e+00 1008.00
IUUC-Xtr-132950 Xenopus tropicalis 62.09 0.00e+00 680.00
IUUC-Xma-133537 Xiphophorus maculatus 65.30 0.00e+00 731.00
Created Date 25-Jun-2017

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