iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111777

Ensembl Protein ID

Solyc06g064830.2.1

UniProt Accession

K4C7B3; K4C7B3_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc06g064830.2	Solyc06g064830.2.1	Solyc06g064830.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.10e-31	105.3	264	301
UBD/Beta-Prp	2.00e-49	169.1	215	513

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d v c++f  d  +l+sGs Dg+ikvW++rtg +l+
   Q: 264  HDDAVLCVDFsRDsEMLASGSQDGKIKVWRIRTGQCLR 301
           99*********777*********************986 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkl........lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk. 91
           ks   c  fspd+++l++ s dg i+vwd  +gkl         +++  h+++v +v+fs+d+++l++gs+D+ ikvw ++tg+c++ l+ 
   Q: 215  KSHPECSRFSPDGQFLVSCSVDGFIEVWDHISGKLkkdlqyqaDETFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLRRLEr 305
           5667899****************************888888877788888888************************************98 PP
   S: 92   ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl......t 176
           +h++ v+sl fs++g  ++s+s d+t+r+  l++g+ l+  ++gh++ vn + +  dg+ ++++s D+ v++Wd kt ++l+t+      +
   Q: 306  AHSQGVTSLVFSRDGTQILSTSFDSTARIHGLKSGKLLK-EFRGHSSYVNDAIFTFDGSRVITASSDGSVKVWDAKTTECLQTFrpppplR 395
           9**************************************.*************************************************77 PP
   S: 177  gghtdsvysls.fdsngkelvsgsldgtvklwdlqtgecvrtln.ghtdnvksvrfs..pnderlvsgssDgsiriWdlrsgdllktlqlh 263
           g  + sv+s+  f +n ++++ + + +++ l  lq g++v+++  g ++    v+++  p++e+++++++D+ ++++ ++s++l + ++ h
   Q: 396  G-GDASVNSVHlFPKNNEHIIVCNKTSSIYLMTLQ-GQVVKSFSsGKREGGDFVAAClsPKGEWIYCVGEDRNLYCFSYQSNKLEHLMKVH 484
           7.99*******999********************6.66787776156777777777677******************************** PP
   S: 264  nssvisvavlsfgdnvlvlgsedskvniwk 293
           ++ vi +++ ++  n +++ +ed++ ++wk
   Q: 485  EKDVIGITH-HPHINLVATYGEDCTMKLWK 513
           *********.*******************8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MSSTLEIEAR DVIKIVLQFC KENSLHQSFQ TLQNECQVSL NTVDSLETFI ADINSGRWDA 60
VLPQVAQLKL PRKILEDLYE QIVLEMIELR EMDTARAILR QTNVMGVMKQ EQPERYLRLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAGTTCAGT TCATAGACAA AACCCTTACA TCTCTCTGTG TATATGTATT TATTTCTGTT 60
CGTGATTTTA CTCTCAAAAG CAGGGCTTAG CTAGGGATTA TAAGCATTCT CATTCTTAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0008380--P:RNA splicing

KEGG

sly:544252

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000857	Aegilops tauschii	89.12	7.00e-77	278.00
IUUC-Aml-001330	Ailuropoda melanoleuca	67.19	0.00e+00	740.00
IUUC-Atr-002570	Amborella trichopoda	89.65	0.00e+00	980.00
IUUC-Apl-003826	Anas platyrhynchos	67.81	0.00e+00	715.00
IUUC-Aca-005183	Anolis carolinensis	66.93	0.00e+00	734.00
IUUC-Aly-005632	Arabidopsis lyrata	85.29	0.00e+00	940.00
IUUC-Ath-007219	Arabidopsis thaliana	85.29	0.00e+00	934.00
IUUC-Ame-011374	Astyanax mexicanus	66.21	0.00e+00	733.00
IUUC-Bta-012890	Bos taurus	67.19	0.00e+00	740.00
IUUC-Bdi-014061	Brachypodium distachyon	85.19	0.00e+00	949.00
IUUC-Bol-016332	Brassica oleracea	85.66	0.00e+00	944.00
IUUC-Bra-017612	Brassica rapa	85.69	0.00e+00	946.00
IUUC-Cel-018238	Caenorhabditis elegans	53.62	1.00e-168	585.00
IUUC-Cja-019336	Callithrix jacchus	67.19	0.00e+00	740.00
IUUC-Cfa-021108	Canis familiaris	67.19	0.00e+00	739.00
IUUC-Cpo-022052	Cavia porcellus	67.19	0.00e+00	740.00
IUUC-Cre-022595	Chlamydomonas reinhardtii	67.32	0.00e+00	741.00
IUUC-Csa-023488	Chlorocebus sabaeus	67.19	0.00e+00	740.00
IUUC-Cho-025010	Choloepus hoffmanni	59.18	0.00e+00	633.00
IUUC-Cin-025251	Ciona intestinalis	64.08	0.00e+00	713.00
IUUC-Csv-026092	Ciona savignyi	61.19	0.00e+00	654.00
IUUC-Dre-027382	Danio rerio	66.60	0.00e+00	732.00
IUUC-Dno-029007	Dasypus novemcinctus	67.38	0.00e+00	741.00
IUUC-Dor-030180	Dipodomys ordii	57.34	9.00e-131	459.00
IUUC-Dme-031762	Drosophila melanogaster	62.70	0.00e+00	697.00
IUUC-Ete-032933	Echinops telfairi	65.97	1.00e-175	608.00
IUUC-Eca-033864	Equus caballus	67.46	0.00e+00	730.00
IUUC-Eeu-034635	Erinaceus europaeus	61.28	3.00e-154	537.00
IUUC-Fca-036119	Felis catus	67.19	0.00e+00	740.00
IUUC-Fal-037396	Ficedula albicollis	67.94	0.00e+00	725.00
IUUC-Gmo-038962	Gadus morhua	65.43	0.00e+00	724.00
IUUC-Gga-040134	Gallus gallus	67.38	0.00e+00	741.00
IUUC-Gac-041630	Gasterosteus aculeatus	65.04	0.00e+00	722.00
IUUC-Gma-043928	Glycine max	89.84	0.00e+00	986.00
IUUC-Ggo-045061	Gorilla gorilla	66.93	0.00e+00	735.00
IUUC-Hsa-046215	Homo sapiens	67.19	0.00e+00	740.00
IUUC-Hvu-047799	Hordeum vulgare	86.78	0.00e+00	677.00
IUUC-Itr-048826	Ictidomys tridecemlineatus	67.19	0.00e+00	740.00
IUUC-Lch-050209	Latimeria chalumnae	62.18	0.00e+00	670.00
IUUC-Lpe-050740	Leersia perrieri	87.13	0.00e+00	965.00
IUUC-Loc-052739	Lepisosteus oculatus	61.58	0.00e+00	669.00
IUUC-Laf-053895	Loxodonta africana	67.06	0.00e+00	736.00
IUUC-Mcc-055183	Macaca mulatta	67.19	0.00e+00	740.00
IUUC-Mtr-057730	Medicago truncatula	86.91	0.00e+00	939.00
IUUC-Mga-059222	Meleagris gallopavo	68.66	8.00e-178	615.00
IUUC-Mmr-061749	Microcebus murinus	67.46	0.00e+00	731.00
IUUC-Mdo-062920	Monodelphis domestica	66.99	0.00e+00	739.00
IUUC-Mmu-063228	Mus musculus	67.19	0.00e+00	740.00
IUUC-Mac-065084	Musa acuminata	90.04	0.00e+00	988.00
IUUC-Mpu-066162	Mustela putorius furo	67.19	0.00e+00	740.00
IUUC-Mlu-067471	Myotis lucifugus	66.21	0.00e+00	732.00
IUUC-Nle-070129	Nomascus leucogenys	67.19	0.00e+00	740.00
IUUC-Opr-071176	Ochotona princeps	67.46	0.00e+00	730.00
IUUC-Ont-071830	Oreochromis niloticus	66.02	0.00e+00	733.00
IUUC-Oan-072778	Ornithorhynchus anatinus	67.38	0.00e+00	741.00
IUUC-Ocu-074570	Oryctolagus cuniculus	67.19	0.00e+00	740.00
IUUC-Oba-075507	Oryza barthii	87.91	0.00e+00	969.00
IUUC-Obr-076672	Oryza brachyantha	88.89	0.00e+00	980.00
IUUC-Ogl-077110	Oryza glaberrima	87.91	0.00e+00	969.00
IUUC-Ogu-077976	Oryza glumaepatula	87.91	0.00e+00	969.00
IUUC-Oin-079525	Oryza indica	87.91	0.00e+00	969.00
IUUC-Olo-080391	Oryza longistaminata	85.42	0.00e+00	960.00
IUUC-Oni-082778	Oryza nivara	87.91	0.00e+00	969.00
IUUC-Opu-083710	Oryza punctata	87.91	0.00e+00	968.00
IUUC-Oru-084250	Oryza rufipogon	87.91	0.00e+00	969.00
IUUC-Osa-085363	Oryza sativa	87.91	0.00e+00	969.00
IUUC-Ola-087092	Oryzias latipes	65.62	0.00e+00	728.00
IUUC-Olu-087753	Ostreococcus lucimarinus	55.73	6.00e-155	540.00
IUUC-Oga-088278	Otolemur garnettii	61.51	0.00e+00	656.00
IUUC-Oar-089664	Ovis aries	66.80	0.00e+00	735.00
IUUC-Ptr-090991	Pan troglodytes	67.19	0.00e+00	740.00
IUUC-Pan-092697	Papio anubis	67.19	0.00e+00	740.00
IUUC-Psi-093204	Pelodiscus sinensis	67.74	0.00e+00	724.00
IUUC-Ppa-095325	Physcomitrella patens	83.59	0.00e+00	925.00
IUUC-Pfo-096988	Poecilia formosa	65.82	0.00e+00	730.00
IUUC-Pab-098288	Pongo abelii	67.19	0.00e+00	740.00
IUUC-Pop-098787	Populus trichocarpa	88.63	0.00e+00	970.00
IUUC-Pca-100583	Procavia capensis	62.50	0.00e+00	653.00
IUUC-Ppe-101307	Prunus persica	88.48	0.00e+00	971.00
IUUC-Pva-102711	Pteropus vampyrus	67.19	0.00e+00	740.00
IUUC-Rno-105614	Rattus norvegicus	67.19	0.00e+00	740.00
IUUC-Sha-107017	Sarcophilus harrisii	67.19	0.00e+00	740.00
IUUC-Smo-108800	Selaginella moellendorffii	77.10	0.00e+00	829.00
IUUC-Sit-110278	Setaria italica	87.52	0.00e+00	944.00
IUUC-Stu-112293	Solanum tuberosum	99.61	0.00e+00	1072.00
IUUC-Sar-112955	Sorex araneus	60.23	0.00e+00	642.00
IUUC-Sbi-114802	Sorghum bicolor	86.94	0.00e+00	936.00
IUUC-Ssc-116054	Sus scrofa	67.19	0.00e+00	740.00
IUUC-Tgu-116909	Taeniopygia guttata	67.32	0.00e+00	732.00
IUUC-Tru-118195	Takifugu rubripes	66.60	0.00e+00	736.00
IUUC-Tsy-119420	Tarsius syrichta	61.72	0.00e+00	659.00
IUUC-Tni-120416	Tetraodon nigroviridis	66.02	0.00e+00	730.00
IUUC-Tca-121653	Theobroma cacao	89.82	0.00e+00	958.00
IUUC-Tae-125609	Triticum aestivum	86.94	0.00e+00	961.00
IUUC-Tur-126197	Triticum urartu	86.07	0.00e+00	687.00
IUUC-Tbe-128009	Tupaia belangeri	67.46	7.00e-140	489.00
IUUC-Ttr-128719	Tursiops truncatus	60.55	0.00e+00	653.00
IUUC-Vpa-130579	Vicugna pacos	66.99	0.00e+00	733.00
IUUC-Vvi-131127	Vitis vinifera	92.80	0.00e+00	1008.00
IUUC-Xtr-132950	Xenopus tropicalis	62.40	0.00e+00	676.00
IUUC-Xma-133537	Xiphophorus maculatus	65.82	0.00e+00	730.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence