iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115691

Ensembl Protein ID

ENSSSCP00000027449.1

UniProt Accession

I3LTK2; I3LTK2_PIG

Genbank Protein ID

ENSSSCP00000027449

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP340182

Gene Name

LOC102160244

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000029602.1	ENSSSCT00000029839.1	ENSSSCP00000027449.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.30e-23	80.0	366	397
UBD/Beta-Prp	9.70e-42	143.4	279	487

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlr 31
           gHtd vt+  f  ++ +vsGsdD t+kvWDl+
   Q: 366  GHTDTVTSAVFtVGDNVVSGSDDRTVKVWDLK 397
           8*******99*733669*************96 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkc..vhtlkgh 93
           ++h++v+ + ++  ++++ +t+s+d+t  ++dv+t  l+++l gh++e t ++ +p++ + vt+s+D t ++wd++++++  v +++gh
   Q: 279  KSHQGVVIAADWLVGGKQAVTASWDRTANLYDVETSELVHCLTGHDQELTHCCTHPTQRLVVTSSRDTTFRLWDFRDPSIhsVNVFQGH 367
           456667777999999999**********************************************************665422889**** PP
   S: 94   edsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl...ktgkllrtltggh 179
           +d+v+s  f   gd +vsGs+drt++vwdl++     +t +  +++++++v  + +++++  +++r+vrl+d+   + ++l r  ++gh
   Q: 368  TDTVTSAVFTV-GDNVVSGSDDRTVKVWDLKNMRSPIATIRTDSAINRITVCVG-QRIIALPHDNRQVRLFDMsgvRLARLPRSSRQGH 454
           ******99999.********************9888756666666666666666.89****************555555555555777* PP
   S: 180  tdsvyslsfdsng..kelvsgsldgtvklwdlq 210
            ++v   +++++     l +++ d++ + w++ 
   Q: 455  RRMVCGSAWSEDHpvCNLFTCGFDRQAIGWSIN 487
           **********99977789999999999999985 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MPTESGSCSA ARQAKQKRKS HSLSIRRTNS SEQERTGLPR EMLEGQDSKL PSSVRSTLLE 60
LFGQIEREFE NLYIENLELR REIETLNERL AAEGQAVDGA ELSKGQLKTK AGHSTSQLSQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAGGTCCCGG CACCCCCTGT CTGGGACCCC ATGGGCGGCA GCGCACGGTC CGGCTGGCAC 60
TGCGCGGCGG CGGGGTGACA CGTGAGTGCA GGCCCGCCAT CTTCCGCCCG GGACCGGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0000460--P:maturation of 5.8S rRNA
GO:0000470--P:maturation of LSU-rRNA

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001249	Ailuropoda melanoleuca	93.75	0.00e+00	942.00
IUUC-Apl-003647	Anas platyrhynchos	91.92	0.00e+00	926.00
IUUC-Aca-004759	Anolis carolinensis	90.51	0.00e+00	929.00
IUUC-Ame-011103	Astyanax mexicanus	55.75	2.00e-141	495.00
IUUC-Bta-012718	Bos taurus	96.57	0.00e+00	960.00
IUUC-Cel-018499	Caenorhabditis elegans	41.81	6.00e-93	334.00
IUUC-Cja-019492	Callithrix jacchus	93.74	0.00e+00	967.00
IUUC-Cfa-020199	Canis familiaris	94.15	0.00e+00	974.00
IUUC-Cpo-022500	Cavia porcellus	87.30	0.00e+00	904.00
IUUC-Csa-023567	Chlorocebus sabaeus	94.34	0.00e+00	974.00
IUUC-Cho-025071	Choloepus hoffmanni	65.86	2.00e-179	621.00
IUUC-Cin-025460	Ciona intestinalis	45.44	6.00e-104	370.00
IUUC-Csv-026042	Ciona savignyi	46.88	1.00e-107	383.00
IUUC-Dre-028214	Danio rerio	83.23	0.00e+00	848.00
IUUC-Dno-029826	Dasypus novemcinctus	91.33	0.00e+00	790.00
IUUC-Dor-030967	Dipodomys ordii	94.03	0.00e+00	877.00
IUUC-Dme-031936	Drosophila melanogaster	48.84	4.00e-117	414.00
IUUC-Ete-032452	Echinops telfairi	90.51	0.00e+00	924.00
IUUC-Eca-033278	Equus caballus	93.95	0.00e+00	969.00
IUUC-Eeu-034592	Erinaceus europaeus	81.21	0.00e+00	808.00
IUUC-Fca-036431	Felis catus	94.37	0.00e+00	971.00
IUUC-Fal-037149	Ficedula albicollis	90.91	0.00e+00	916.00
IUUC-Gmo-038476	Gadus morhua	77.37	0.00e+00	754.00
IUUC-Gga-041099	Gallus gallus	91.31	0.00e+00	921.00
IUUC-Gac-042374	Gasterosteus aculeatus	81.39	0.00e+00	806.00
IUUC-Ggo-044683	Gorilla gorilla	86.46	0.00e+00	877.00
IUUC-Hsa-046658	Homo sapiens	93.54	0.00e+00	962.00
IUUC-Itr-048870	Ictidomys tridecemlineatus	93.85	0.00e+00	892.00
IUUC-Lch-050571	Latimeria chalumnae	84.03	0.00e+00	875.00
IUUC-Loc-052652	Lepisosteus oculatus	80.88	0.00e+00	845.00
IUUC-Laf-053712	Loxodonta africana	92.18	0.00e+00	947.00
IUUC-Mcc-055521	Macaca mulatta	94.34	0.00e+00	974.00
IUUC-Meu-056324	Macropus eugenii	87.68	0.00e+00	869.00
IUUC-Mga-060114	Meleagris gallopavo	91.13	0.00e+00	917.00
IUUC-Mmr-061176	Microcebus murinus	94.75	0.00e+00	977.00
IUUC-Mdo-061888	Monodelphis domestica	91.33	0.00e+00	899.00
IUUC-Mmu-063977	Mus musculus	92.94	0.00e+00	964.00
IUUC-Mpu-066220	Mustela putorius furo	82.62	4.00e-179	620.00
IUUC-Mlu-068155	Myotis lucifugus	94.35	0.00e+00	972.00
IUUC-Nle-069964	Nomascus leucogenys	93.74	0.00e+00	969.00
IUUC-Opr-070925	Ochotona princeps	90.18	3.00e-144	504.00
IUUC-Ont-071317	Oreochromis niloticus	85.08	0.00e+00	828.00
IUUC-Oan-072952	Ornithorhynchus anatinus	92.34	0.00e+00	930.00
IUUC-Ocu-073913	Oryctolagus cuniculus	93.95	0.00e+00	970.00
IUUC-Ola-087024	Oryzias latipes	84.10	0.00e+00	873.00
IUUC-Oga-087945	Otolemur garnettii	93.75	0.00e+00	965.00
IUUC-Oar-089854	Ovis aries	96.37	0.00e+00	949.00
IUUC-Ptr-091486	Pan troglodytes	93.74	0.00e+00	964.00
IUUC-Pan-091738	Papio anubis	94.34	0.00e+00	974.00
IUUC-Psi-093953	Pelodiscus sinensis	90.73	0.00e+00	917.00
IUUC-Pma-094560	Petromyzon marinus	73.66	0.00e+00	765.00
IUUC-Pfo-097222	Poecilia formosa	83.43	0.00e+00	822.00
IUUC-Pab-098778	Pongo abelii	88.89	0.00e+00	901.00
IUUC-Pca-100852	Procavia capensis	89.09	0.00e+00	899.00
IUUC-Pva-103130	Pteropus vampyrus	96.28	2.00e-134	472.00
IUUC-Rno-105848	Rattus norvegicus	84.27	0.00e+00	849.00
IUUC-Sha-106750	Sarcophilus harrisii	91.94	0.00e+00	929.00
IUUC-Sar-113749	Sorex araneus	86.46	0.00e+00	872.00
IUUC-Tgu-117365	Taeniopygia guttata	90.10	0.00e+00	873.00
IUUC-Tru-117595	Takifugu rubripes	82.66	0.00e+00	814.00
IUUC-Tsy-118973	Tarsius syrichta	72.45	4.00e-146	511.00
IUUC-Tni-120545	Tetraodon nigroviridis	82.36	0.00e+00	852.00
IUUC-Tbe-127976	Tupaia belangeri	70.91	0.00e+00	682.00
IUUC-Ttr-128472	Tursiops truncatus	93.94	0.00e+00	957.00
IUUC-Xtr-132621	Xenopus tropicalis	89.49	0.00e+00	887.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence