iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
iRefIndex	PINA	HINT	Mentha
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-07	32.6	39	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle +    +   +++ C+H +++ C+ kw      ss + +CPlC+
   Q: 39   CPICLENLterrSA-AVITVCKHGYCLACIRKW------SSFKRNCPLCN 81
           ********654322.778***************......999999****7 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MPPLPSSTAP SSSRHLRSPE SIAKFAGRAI FPALQGKSCP ICLENLTERR SAAVITVCKH 60
GYCLACIRKW SSFKRNCPLC NTRFDSWFIV SDFASRKYHK EQLPILRDRE TLTYHRNNPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACCCAAACC GACATTAACC GGTTATCTAT CTGAAATCCA TCTCGGTTCA TTAAAACCCG 60
ACTTTTCCAA GAGCCCGACT TCACCGAACA ATCTCTATCT CCGGTCATGC CTCCATTACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002240	Ailuropoda melanoleuca	25.00	2.00e-13	70.90
IUUC-Aca-004984	Anolis carolinensis	24.44	3.00e-12	64.30
IUUC-Aly-005524	Arabidopsis lyrata	78.68	4.00e-93	333.00
IUUC-Bta-012637	Bos taurus	25.86	6.00e-12	66.20
IUUC-Bol-015115	Brassica oleracea	72.79	4.00e-99	353.00
IUUC-Bra-017451	Brassica rapa	63.85	8.00e-92	329.00
IUUC-Cfa-021203	Canis familiaris	25.17	1.00e-12	68.20
IUUC-Cre-022857	Chlamydomonas reinhardtii	46.51	6.00e-07	48.50
IUUC-Cho-024870	Choloepus hoffmanni	25.95	2.00e-12	67.40
IUUC-Cne-026788	Cryptococcus neoformans	37.25	2.00e-06	47.80
IUUC-Ete-032300	Echinops telfairi	24.31	3.00e-12	67.00
IUUC-Eca-033690	Equus caballus	25.86	2.00e-12	67.80
IUUC-Eeu-035257	Erinaceus europaeus	25.35	6.00e-12	65.90
IUUC-Fal-036797	Ficedula albicollis	38.64	2.00e-07	50.40
IUUC-Gmo-039416	Gadus morhua	23.40	3.00e-11	62.40
IUUC-Gac-042227	Gasterosteus aculeatus	26.50	9.00e-16	77.40
IUUC-Itr-048818	Ictidomys tridecemlineatus	25.84	4.00e-12	66.60
IUUC-Lch-050031	Latimeria chalumnae	24.57	9.00e-11	62.40
IUUC-Laf-053820	Loxodonta africana	24.31	6.00e-13	69.30
IUUC-Mga-059221	Meleagris gallopavo	38.30	9.00e-09	55.10
IUUC-Mmr-061481	Microcebus murinus	24.83	2.00e-12	67.80
IUUC-Nle-069862	Nomascus leucogenys	24.48	6.00e-12	66.20
IUUC-Oga-088059	Otolemur garnettii	24.17	3.00e-12	67.00
IUUC-Oar-089592	Ovis aries	24.48	1.00e-11	65.50
IUUC-Psi-093177	Pelodiscus sinensis	23.30	3.00e-10	58.20
IUUC-Ppa-095668	Physcomitrella patens	31.37	2.00e-31	129.00
IUUC-Pop-099119	Populus trichocarpa	52.90	1.00e-67	248.00
IUUC-Ppe-101922	Prunus persica	49.00	1.00e-59	222.00
IUUC-Pva-102982	Pteropus vampyrus	24.57	3.00e-12	67.00
IUUC-Smo-109039	Selaginella moellendorffii	32.92	3.00e-33	135.00
IUUC-Sar-113237	Sorex araneus	25.64	1.00e-07	51.20
IUUC-Ssc-115244	Sus scrofa	24.14	1.00e-12	68.20
IUUC-Tgu-117180	Taeniopygia guttata	24.21	4.00e-12	66.60
IUUC-Tca-121712	Theobroma cacao	50.66	6.00e-79	286.00
IUUC-Ttr-128204	Tursiops truncatus	24.05	4.00e-12	66.60
IUUC-Vvi-131157	Vitis vinifera	49.45	2.00e-70	258.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence