iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049436

Ensembl Protein ID

ENSLACP00000017442.1

UniProt Accession

H3B6C1; H3B6C1_LATCH

Genbank Protein ID

ENSLACP00000017442

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01089438

Gene Name

SPAG16

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000015362.1	ENSLACT00000017570.1	ENSLACP00000017442.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-32	110.6	453	491
UBD/Beta-Prp	1.90e-56	191.7	327	528

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvllk 37
           gHtdsv++++f   s ++l+++s D+t+ +WD r g + +
   Q: 453  GHTDSVNSIEFlpfS-NILLTSSADKTLSLWDARMGLCAQ 491
           8***********854.9****************9999987 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkgheds 96
            h+  i+cv+ +p k++l+t+s+d+  k  +v +g+++ + +gh++  + ++f+p+g+ l+t+s D t+k+wd+s+++c+ ++++h++ 
   Q: 327  LHELAISCVTLHPRKRILVTASDDHLWKMCSVPNGDVIMTGKGHTDWLSGCCFHPSGNRLATTSGDTTLKIWDFSKSECLLSFEEHTHV 415
           46667777777777777777777777777777777777777777777777777777777777777777777777777777777777777 PP
   S: 97   vlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvys 185
           ++s+s++  gd+++s s d+t ++wd++++ c   tl+gh+++vn++++ p++n+l ++s+D+t+ lWd ++g + +t+ g h  s + 
   Q: 416  IWSCSWHTCGDFVASCSMDKTSKIWDINSERCRC-TLRGHTDSVNSIEFLPFSNILLTSSADKTLSLWDARMGLCAQTFYG-HLYSCND 502
           7777777777777777777777777777777777.7777777777777777777777777777777777777777777776.7777777 PP
   S: 186  lsfdsngkelvsgsldgtvklwdlqt 211
             f+ +g  ++s++  g +klwd+++
   Q: 503  ARFNLKGDTIASCDSYGVLKLWDVRK 528
           77777777777777777777777764 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

DNAFYLEQIS LSEGSEEDFQ YEDVSAADDF SLTEGDEDLD SAIKNLQEQT EDAQLVAKQE 60
EQTCKFPVSR RQEVVDDFLR NFLVKMGMTR TLDCFQTEWY ELIQKGLLNH EDVAFVPDVY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACAATGCAT TTTATTTAGA GCAGATTTCT CTCTCAGAAG GGTCTGAAGA GGATTTCCAG 60
TATGAAGATG TTTCAGCTGC TGATGACTTC AGCCTTACCG AGGGGGACGA GGATCTGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003836	Anas platyrhynchos	73.17	1.00e-73	268.00
IUUC-Aca-004890	Anolis carolinensis	53.83	0.00e+00	654.00
IUUC-Ame-011811	Astyanax mexicanus	61.54	0.00e+00	692.00
IUUC-Cfa-020939	Canis familiaris	68.35	2.00e-65	240.00
IUUC-Cpo-022422	Cavia porcellus	55.23	3.00e-97	347.00
IUUC-Cre-022910	Chlamydomonas reinhardtii	30.97	6.00e-55	208.00
IUUC-Cho-024331	Choloepus hoffmanni	55.82	2.00e-179	622.00
IUUC-Cin-025207	Ciona intestinalis	58.51	0.00e+00	754.00
IUUC-Csv-026299	Ciona savignyi	51.76	1.00e-156	546.00
IUUC-Dre-028682	Danio rerio	58.88	0.00e+00	756.00
IUUC-Dor-030289	Dipodomys ordii	49.74	3.00e-118	418.00
IUUC-Ete-032579	Echinops telfairi	56.38	0.00e+00	645.00
IUUC-Eca-033907	Equus caballus	54.23	2.00e-167	582.00
IUUC-Eeu-034723	Erinaceus europaeus	46.83	7.00e-149	520.00
IUUC-Fca-036062	Felis catus	54.73	5.00e-168	583.00
IUUC-Fal-036929	Ficedula albicollis	55.94	5.00e-106	377.00
IUUC-Gmo-039703	Gadus morhua	45.67	2.00e-93	336.00
IUUC-Gga-040394	Gallus gallus	60.07	0.00e+00	685.00
IUUC-Gac-041652	Gasterosteus aculeatus	46.62	2.00e-137	482.00
IUUC-Hsa-046165	Homo sapiens	54.08	0.00e+00	654.00
IUUC-Loc-052062	Lepisosteus oculatus	72.67	4.00e-142	496.00
IUUC-Mcc-054825	Macaca mulatta	55.07	0.00e+00	663.00
IUUC-Meu-056457	Macropus eugenii	37.65	2.00e-91	329.00
IUUC-Mmu-063303	Mus musculus	52.31	0.00e+00	636.00
IUUC-Mpu-066714	Mustela putorius furo	65.00	2.00e-89	321.00
IUUC-Nle-069920	Nomascus leucogenys	65.45	1.00e-91	328.00
IUUC-Opr-070273	Ochotona princeps	53.06	7.00e-171	593.00
IUUC-Ont-072313	Oreochromis niloticus	46.34	1.00e-140	493.00
IUUC-Ptr-091332	Pan troglodytes	54.41	0.00e+00	657.00
IUUC-Psi-093988	Pelodiscus sinensis	73.63	6.00e-125	439.00
IUUC-Pma-094595	Petromyzon marinus	55.07	0.00e+00	730.00
IUUC-Ppa-095608	Physcomitrella patens	42.66	5.00e-128	451.00
IUUC-Pfo-097048	Poecilia formosa	49.49	4.00e-83	300.00
IUUC-Pab-097856	Pongo abelii	50.00	4.00e-165	574.00
IUUC-Pca-100171	Procavia capensis	49.45	2.00e-134	472.00
IUUC-Pva-103088	Pteropus vampyrus	47.55	8.00e-161	560.00
IUUC-Rno-105955	Rattus norvegicus	60.07	1.00e-101	362.00
IUUC-Smo-108997	Selaginella moellendorffii	41.33	1.00e-121	429.00
IUUC-Sar-113008	Sorex araneus	45.11	2.00e-148	519.00
IUUC-Tgu-116809	Taeniopygia guttata	61.59	1.00e-60	224.00
IUUC-Tsy-119183	Tarsius syrichta	60.22	9.00e-101	360.00
IUUC-Tbe-127666	Tupaia belangeri	43.38	2.00e-82	300.00
IUUC-Ttr-128610	Tursiops truncatus	42.60	2.00e-70	260.00
IUUC-Vpa-130702	Vicugna pacos	50.60	1.00e-156	546.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence