iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-022437

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02007386

Gene Name

RAB40C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000023164.1	ENSCPOT00000022994.1	ENSCPOP00000019362.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	1.90e-16	59.6	221	268

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 1    lsklwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           ++k+w ++++++SLq+LC++aI++c++ + +   dkLPLP  +k++L+++++
   Q: 221  MEKIW-RPNRVFSLQDLCCRAIVSCTPVHLI---DKLPLPVTIKSHLKSFSM 268
           67899.**********************888...***************976 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

PWAAGGHAPS CPAGRRLLAS ARRCGGGGGG ALEPRSGGWR MGTQGSPVKS YDYLLKFLLV 60
GDSDVGKGEI LESLQDGAAE SPYAYSNGRI DYKTTTILLD GRRVKLELWD TSGQGRFCTI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGTGGGCGG CGGGCGGTCA CGCGCCTTCG TGTCCTGCTG GGCGCCGCTT ACTTGCCTCC 60
GCCCGCAGGT GCGGCGGCGG CGGTGGCGGC GCCCTCGAGC CGCGGAGCGG CGGCTGGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005622--C:intracellular
GO:0005525--F:GTP binding
GO:0016567--P:protein ubiquitination
GO:0007264--P:small GTPase mediated signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001616	Ailuropoda melanoleuca	98.89	1.00e-140	492.00
IUUC-Apl-003799	Anas platyrhynchos	89.83	9.00e-122	429.00
IUUC-Ame-011203	Astyanax mexicanus	94.12	4.00e-145	506.00
IUUC-Bta-013490	Bos taurus	98.90	1.00e-143	501.00
IUUC-Cja-019990	Callithrix jacchus	98.53	5.00e-145	506.00
IUUC-Csa-024147	Chlorocebus sabaeus	98.53	4.00e-143	500.00
IUUC-Dre-027427	Danio rerio	93.38	8.00e-145	505.00
IUUC-Dno-029998	Dasypus novemcinctus	91.96	4.00e-108	386.00
IUUC-Dor-030584	Dipodomys ordii	89.69	3.00e-102	363.00
IUUC-Dme-031810	Drosophila melanogaster	68.89	6.00e-94	336.00
IUUC-Ete-033080	Echinops telfairi	97.90	5.00e-139	486.00
IUUC-Eca-033423	Equus caballus	99.10	1.00e-118	418.00
IUUC-Eeu-034590	Erinaceus europaeus	88.79	4.00e-105	373.00
IUUC-Fca-035697	Felis catus	99.10	5.00e-114	403.00
IUUC-Fal-037070	Ficedula albicollis	98.53	5.00e-143	499.00
IUUC-Gmo-039605	Gadus morhua	91.91	7.00e-143	499.00
IUUC-Gga-040343	Gallus gallus	98.53	5.00e-143	499.00
IUUC-Gac-041833	Gasterosteus aculeatus	90.51	9.00e-141	492.00
IUUC-Ggo-045131	Gorilla gorilla	90.81	7.00e-126	442.00
IUUC-Hsa-046237	Homo sapiens	98.53	4.00e-143	500.00
IUUC-Itr-048902	Ictidomys tridecemlineatus	99.63	1.00e-143	501.00
IUUC-Lch-050193	Latimeria chalumnae	94.87	5.00e-146	509.00
IUUC-Loc-052243	Lepisosteus oculatus	93.41	1.00e-145	508.00
IUUC-Laf-054435	Loxodonta africana	96.32	3.00e-142	497.00
IUUC-Mcc-055337	Macaca mulatta	98.16	5.00e-142	496.00
IUUC-Meu-056731	Macropus eugenii	97.45	4.00e-74	271.00
IUUC-Mmr-061380	Microcebus murinus	99.26	3.00e-142	497.00
IUUC-Mdo-062438	Monodelphis domestica	98.17	3.00e-143	500.00
IUUC-Mmu-064046	Mus musculus	99.26	1.00e-143	501.00
IUUC-Mpu-066029	Mustela putorius furo	94.62	2.00e-115	408.00
IUUC-Mlu-067741	Myotis lucifugus	98.53	2.00e-143	501.00
IUUC-Nle-069240	Nomascus leucogenys	92.28	6.00e-130	456.00
IUUC-Ont-071248	Oreochromis niloticus	93.01	4.00e-144	503.00
IUUC-Oan-073432	Ornithorhynchus anatinus	97.76	1.00e-115	409.00
IUUC-Ola-086486	Oryzias latipes	88.48	1.00e-136	478.00
IUUC-Oga-088293	Otolemur garnettii	99.26	1.00e-143	501.00
IUUC-Ptr-090720	Pan troglodytes	98.53	4.00e-143	500.00
IUUC-Pan-091732	Papio anubis	98.53	4.00e-143	500.00
IUUC-Psi-093627	Pelodiscus sinensis	98.32	4.00e-139	486.00
IUUC-Pfo-097105	Poecilia formosa	91.91	2.00e-143	501.00
IUUC-Pab-098054	Pongo abelii	98.53	4.00e-143	500.00
IUUC-Pca-100775	Procavia capensis	99.33	6.00e-88	316.00
IUUC-Pva-102658	Pteropus vampyrus	98.16	2.00e-142	497.00
IUUC-Rno-105303	Rattus norvegicus	99.26	1.00e-143	501.00
IUUC-Sha-106536	Sarcophilus harrisii	98.17	3.00e-143	500.00
IUUC-Tgu-116858	Taeniopygia guttata	98.97	1.00e-112	398.00
IUUC-Tru-117605	Takifugu rubripes	88.42	1.00e-132	465.00
IUUC-Tni-120350	Tetraodon nigroviridis	92.28	3.00e-143	500.00
IUUC-Ttr-129236	Tursiops truncatus	98.53	6.00e-145	506.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence