iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tni-120559

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Chromosome 18 SCAF14712, whole genome shotgun sequence

Genbank Nucleotide ID

CAAE01014712

Gene Name

RAB40C (1 of many); GSTENG00022691001

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTNIG00000012082.1	ENSTNIT00000015248.1	ENSTNIP00000015046.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	2.20e-16	59.7	180	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 1    lsklwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           ++k+w ++++++SLq+LC+++I++c++ + +   dkLPLP ++k++L+++++
   Q: 180  MEKFW-RPNRVFSLQDLCCRSIVSCTPVHLI---DKLPLPVAIKSHLKSFSM 227
           67899.**********************888...***************976 PP

Organism

Tetraodon nigroviridis

Protein Sequence
(Fasta)

MGTQNSPVKS YDYLLKFLLV GDSDVGKGEI LDSLQDGSAE SPYAYSSGID YKTTTILLDG 60
RRVKLELWDT SGQGRFCTIF RSYSRGAQGI LLVYDITNGW SFDGIDRWIR EIDEHAPGVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGACCC AGAATAGTCC TGTCAAGAGT TACGATTATC TCTTGAAATT CCTTCTGGTG 60
GGAGACAGTG ATGTCGGAAA GGGGGAAATC TTAGATAGTT TGCAAGACGG ATCTGCAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005622--C:intracellular
GO:0005525--F:GTP binding
GO:0007264--P:small GTPase mediated signal transduction

KEGG

tng:GSTEN00022691G001

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gac-041833	Gasterosteus aculeatus	96.50	4.00e-149	520.00
IUUC-Ont-071866	Oreochromis niloticus	99.16	5.00e-143	499.00
IUUC-Ola-086486	Oryzias latipes	93.06	8.00e-152	528.00
IUUC-Pfo-096187	Poecilia formosa	97.74	2.00e-156	544.00
IUUC-Tru-117605	Takifugu rubripes	91.89	1.00e-138	484.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence