iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114218

UUCD1 version

UUC-SoB-00588

Ensembl Protein ID

Sb03g013890.1

UniProt Accession

A0A1B6Q3J1; A0A1B6Q3J1_SORBI

Genbank Protein ID

KXG32474.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G159500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g013890	Sb03g013890.1	Sb03g013890.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.20e-06	28.4	66	112

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf.....kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+       ++ +  l+CgH fh+dC+    g+  ++++  +CP Cr
   Q: 66   CSICLDTVvaggeERSTARLQCGHEFHLDCI----GSAFNAKGIMQCPNCR 112
           ******9988888666778***********9....555799999******8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGAGAQEDEE ETTMVAEGGV REEEQAAAEG AGEEEQLGQG GGGEGEGEGE GEGGCGEEKA 60
AAVMSCSICL DTVVAGGEER STARLQCGHE FHLDCIGSAF NAKGIMQCPN CRTIENGNWL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCGCCG GCGCCCAGGA GGATGAGGAG GAGACAACCA TGGTGGCGGA GGGAGGAGTC 60
AGAGAGGAGG AGCAAGCGGC GGCGGAGGGC GCAGGAGAGG AGGAGCAGTT GGGGCAGGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004841	Anolis carolinensis	34.38	8.00e-05	40.80
IUUC-Ame-011941	Astyanax mexicanus	34.38	4.00e-06	45.80
IUUC-Dre-028834	Danio rerio	32.81	1.00e-05	44.30
IUUC-Gmo-039590	Gadus morhua	32.81	2.00e-05	43.10
IUUC-Gac-041759	Gasterosteus aculeatus	32.81	2.00e-05	43.50
IUUC-Mmr-060582	Microcebus murinus	31.25	2.00e-04	40.40
IUUC-Ncr-068714	Neurospora crassa	33.96	5.00e-04	38.10
IUUC-Opr-070290	Ochotona princeps	34.38	2.00e-04	40.00
IUUC-Ont-072477	Oreochromis niloticus	32.81	2.00e-05	43.50
IUUC-Oan-073083	Ornithorhynchus anatinus	31.75	7.00e-05	41.20
IUUC-Oar-089906	Ovis aries	32.39	2.00e-04	40.00
IUUC-Psi-093689	Pelodiscus sinensis	43.75	3.00e-04	39.30
IUUC-Pfo-096590	Poecilia formosa	32.81	2.00e-05	43.90
IUUC-Sit-110600	Setaria italica	75.06	4.00e-158	550.00
IUUC-Ssc-116198	Sus scrofa	31.25	4.00e-04	39.30
IUUC-Tgu-116484	Taeniopygia guttata	42.42	3.00e-04	38.10
IUUC-Tru-118590	Takifugu rubripes	32.31	2.00e-05	43.10
IUUC-Tni-120695	Tetraodon nigroviridis	32.31	2.00e-05	43.10
IUUC-Xma-134174	Xiphophorus maculatus	32.81	2.00e-05	43.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence