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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-006590
UUCD1 version UUC-ArT-01175
Ensembl Protein ID AT5G66160.1
UniProt Accession Q9M622; RMR1_ARATH
Genbank Protein ID AAF32325.1; BAB10421.1; AED98167.1; AAK59594.1; AAK93713.1
Protein Name Receptor homology region, transmembrane domain- and RING domain-containing protein 1; ReMembR-H2 protein JR700
Genbank Nucleotide ID AF218807; AB011474; CP002688; AY035089; AY051036
Gene Name RMR1; JR700; At5g66160; K2A18.24
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT5G66160 AT5G66160.1 AT5G66160.1
AT5G66160 AT5G66160.2 AT5G66160.2
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
HINTMentha
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 1.20e-09 39.4 232 274
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCled+   + +++lpC+H+fh++C+  w     +++   +CP+C+
   Q: 232  CAICLEDYrfGESLRLLPCQHAFHLNCIDSW-----LTKWGTSCPVCK 274
           ******8877666******************.....7888999****6 PP
   
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Involved in the trafficking of vacuolar proteins. Functions probably as a sorting receptor for protein trafficking to the protein storage vacuole (PSV) by binding the C-terminal vacuolar sorting determinant (VSD) of vacuolar-sorted proteins.
 Involved in the trafficking of vacuolar proteins. Functions probably as a sorting receptor for protein trafficking to the protein storage vacuole (PSV) by binding the C-terminal vacuolar sorting determinant (VSD) of vacuolar-sorted proteins.
Protein Sequence
(Fasta)
MRLVVSSCLL VAAPFLSSLL RVSLATVVLN SISASFADLP AKFDGSVTKN GICGALYVAD 60
PLDGCSPLLH AAASNWTQHR TTKFALIIRG ECSFEDKLLN AQNSGFQAVI VYDNIDNEDL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-006590|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AAAGCCTCTG AGACGAGTAG AAGGTTCTCT CTGGTGAAGA AACCAATGCA TTTCGGCGAC 60
AGCCTGAAAC TGAAAAGCCA TCGATCGACC GAGAAAGCGA AAAGAGAGAG AGATGAGACT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-006590|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-1015--Disulfide bond
KW-0325--Glycoprotein
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0479--Metal-binding
KW-0653--Protein transport
KW-0675--Receptor
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0813--Transport
KW-0926--Vacuole
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50089--ZF_RING_2
Pfam

PF02225--PA
PF13639--zf-RING_2
SMART

SM00184--RING
Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0000306--C:extrinsic component of vacuolar membrane
GO:0000139--C:Golgi membrane
GO:0016021--C:integral component of membrane
GO:0031902--C:late endosome membrane
GO:0032586--C:protein storage vacuole membrane
GO:0043621--F:protein self-association
GO:0008270--F:zinc ion binding
GO:0006886--P:intracellular protein transport
KEGG ath:AT5G66160
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Apl-004022 Anas platyrhynchos 32.80 4.00e-32 131.00
IUUC-Aly-006519 Arabidopsis lyrata 95.79 3.00e-166 576.00
IUUC-Ame-010635 Astyanax mexicanus 32.44 6.00e-34 137.00
IUUC-Bdi-014479 Brachypodium distachyon 44.18 2.00e-51 194.00
IUUC-Bol-015396 Brassica oleracea 76.60 1.00e-116 412.00
IUUC-Bra-016977 Brassica rapa 78.12 2.00e-108 384.00
IUUC-Cja-019445 Callithrix jacchus 31.39 2.00e-24 105.00
IUUC-Cpo-021602 Cavia porcellus 33.73 4.00e-32 131.00
IUUC-Cre-022631 Chlamydomonas reinhardtii 31.79 3.00e-26 112.00
IUUC-Cho-024954 Choloepus hoffmanni 28.82 2.00e-21 96.30
IUUC-Csv-025959 Ciona savignyi 33.98 8.00e-29 120.00
IUUC-Dre-028744 Danio rerio 32.22 7.00e-31 127.00
IUUC-Dno-030036 Dasypus novemcinctus 34.07 2.00e-33 135.00
IUUC-Ete-032610 Echinops telfairi 32.84 8.00e-26 110.00
IUUC-Eeu-034439 Erinaceus europaeus 30.80 5.00e-34 137.00
IUUC-Gmo-039485 Gadus morhua 33.85 8.00e-32 130.00
IUUC-Gga-041166 Gallus gallus 32.80 6.00e-32 130.00
IUUC-Gac-041339 Gasterosteus aculeatus 33.20 1.00e-32 132.00
IUUC-Lch-050635 Latimeria chalumnae 32.41 2.00e-30 125.00
IUUC-Loc-051914 Lepisosteus oculatus 31.60 1.00e-31 130.00
IUUC-Lma-053286 Leptosphaeria maculans 45.61 2.00e-13 69.70
IUUC-Meu-056237 Macropus eugenii 28.74 5.00e-26 110.00
IUUC-Mga-059780 Meleagris gallopavo 32.80 6.00e-32 130.00
IUUC-Mdo-062795 Monodelphis domestica 32.54 2.00e-31 129.00
IUUC-Mmu-063727 Mus musculus 31.33 9.00e-28 117.00
IUUC-Mac-064759 Musa acuminata 48.64 3.00e-55 207.00
IUUC-Opr-070767 Ochotona princeps 26.53 3.00e-18 85.10
IUUC-Ont-071868 Oreochromis niloticus 33.09 1.00e-32 133.00
IUUC-Oan-073710 Ornithorhynchus anatinus 32.69 2.00e-27 115.00
IUUC-Ola-086440 Oryzias latipes 32.34 9.00e-31 127.00
IUUC-Pfo-097232 Poecilia formosa 31.97 3.00e-30 125.00
IUUC-Pop-099688 Populus trichocarpa 49.45 2.00e-71 261.00
IUUC-Pca-100609 Procavia capensis 32.03 1.00e-26 113.00
IUUC-Ppe-101605 Prunus persica 51.07 4.00e-82 296.00
IUUC-Rno-105109 Rattus norvegicus 31.33 9.00e-28 117.00
IUUC-Sha-106787 Sarcophilus harrisii 32.93 2.00e-31 128.00
IUUC-Sar-113580 Sorex araneus 29.03 7.00e-21 94.00
IUUC-Tru-118219 Takifugu rubripes 34.20 1.00e-33 136.00
IUUC-Tni-120357 Tetraodon nigroviridis 32.28 2.00e-33 135.00
IUUC-Tca-121333 Theobroma cacao 51.81 1.00e-72 265.00
IUUC-Tre-121978 Trichoderma reesei 42.19 2.00e-13 70.10
IUUC-Tvi-122495 Trichoderma virens 50.00 3.00e-14 72.80
IUUC-Tme-126970 Tuber melanosporum 48.98 6.00e-13 68.60
IUUC-Vpa-130314 Vicugna pacos 33.20 5.00e-29 120.00
IUUC-Vvi-131036 Vitis vinifera 55.21 2.00e-77 281.00
IUUC-Xtr-132114 Xenopus tropicalis 32.32 6.00e-34 137.00
IUUC-Xma-133474 Xiphophorus maculatus 32.71 7.00e-31 127.00
Created Date 25-Jun-2017

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