iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssl-108592

Ensembl Protein ID

EDO00229

UniProt Accession

A7ECQ0; A7ECQ0_SCLS1

Genbank Protein ID

APA09181.1; EDO00229.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CP017817; CH476623

Gene Name

SS1G_03089; sscle_04g039510

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SS1G_03089	EDO00229	EDO00229

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.00e-49	160.9	579	631
UBD/Beta-Prp	1.40e-85	286.1	367	644

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...............sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH  +v++++f               s+ +l+++Gs+D+t+k+W+l++  +l+
   Q: 579  GHRRGVWSVKFapkdtptlvgdsgpaSGkGLILTGSGDKTVKIWNLSDYSCLR 631
           89***********998888888888877788**************98877765 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkf.spdksllatgsrdgtikvwdvttgkl.............lrslsgheaevtavkfspdgkilvtgseDrtikvw..dls..tgkc 86
            ++g+h++ i  + f  p++slla +  ++ +++ ++ +g+              +++l+ghe+ + +++++ +g +++tg++D+t+++w  d++  +++c
   Q: 367  RISGTHDEIID-LGFlLPNQSLLALATNSEELRIVSLNQGSPtdstestkyfgadVAQLKGHEDIIICLDIDWSGHWIATGAKDNTARLWriDPEnsSYTC 466
           67899999998.7777************************999***********************************************7744466999* PP
   S: 87   vhtlkghedsvls..................lsfspsgdklvsGshdrtirvwdletgqclee......tlsghdgvvncvvvhpdgnllvsGslDrtvrl 163
             t++gh +s+ +                  l+  p  ++l++Gs+d+ti+ wd++ + +  +      t + hd+ +n + ++ +++l++s+s Drtv++
   Q: 467  HTTFTGHAESLGAialphmpppessaaykspLDHPP--SFLLTGSQDQTIKRWDIQAQVVAGKaprasyTRKAHDKDINALDINHSSQLFASASQDRTVKI 565
           ************************998887777777..*******************999999************************************** PP
   S: 164  Wdlktgkllrtltgghtdsvyslsfdsng..............kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvr 229
           W+    ++   l+g h + v s++f ++                 +++gs d+tvk+w+l+  +c+rt++ght+ v+ v+
   Q: 566  WSADELEVQGVLRG-HRRGVWSVKFAPKDtptlvgdsgpasgkGLILTGSGDKTVKIWNLSDYSCLRTFEGHTNSVLKVA 644
           ***999999999*9.*********99999999999999****999*******************************9987 PP

Organism

Sclerotinia sclerotiorum

Protein Sequence
(Fasta)

MATKAPYKTT FEPEHTIQPI YTGGSVALDQ TGRILATTLG EDALLTDLDT GRELARIEGD 60
GEVISTLSLT PSASHLVICS RSLSMRIYSL RPSLASDLTL TYELLRTLKP HATPVVVLAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTACTA AAGCCCCTTA CAAAACGACT TTTGAACCCG AGCACACTAT ACAACCAATT 60
TATACTGGAG GGAGTGTTGC GCTTGATCAA ACGGGGCGCA TACTTGCTAC AACCCTTGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

ssl:SS1G_03089

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	28.60	3.00e-96	343.00
IUUC-Aml-002376	Ailuropoda melanoleuca	31.26	1.00e-111	394.00
IUUC-Atr-002486	Amborella trichopoda	28.77	7.00e-111	392.00
IUUC-Apl-003519	Anas platyrhynchos	28.95	4.00e-95	340.00
IUUC-Aca-004363	Anolis carolinensis	26.34	6.00e-44	169.00
IUUC-Aly-006152	Arabidopsis lyrata	28.48	1.00e-96	345.00
IUUC-Ath-006966	Arabidopsis thaliana	28.22	1.00e-97	348.00
IUUC-Ago-007746	Ashbya gossypii	33.85	1.00e-130	458.00
IUUC-Acl-008009	Aspergillus clavatus	53.72	0.00e+00	957.00
IUUC-Afl-008681	Aspergillus flavus	53.51	0.00e+00	887.00
IUUC-Afu-008798	Aspergillus fumigatus	53.90	0.00e+00	926.00
IUUC-Ani-009278	Aspergillus nidulans	52.48	0.00e+00	950.00
IUUC-Ang-009640	Aspergillus niger	52.08	0.00e+00	903.00
IUUC-Aor-010160	Aspergillus oryzae	53.51	0.00e+00	887.00
IUUC-Ate-010320	Aspergillus terreus	53.94	0.00e+00	942.00
IUUC-Bgr-012054	Blumeria graminis	63.22	0.00e+00	1159.00
IUUC-Bta-012611	Bos taurus	30.33	8.00e-105	372.00
IUUC-Bci-013797	Botrytis cinerea	90.11	0.00e+00	1670.00
IUUC-Bdi-014384	Brachypodium distachyon	30.01	6.00e-111	392.00
IUUC-Bol-015097	Brassica oleracea	29.05	1.00e-98	352.00
IUUC-Bra-017798	Brassica rapa	29.16	4.00e-99	353.00
IUUC-Cel-018664	Caenorhabditis elegans	27.78	6.00e-82	296.00
IUUC-Cja-019092	Callithrix jacchus	30.49	2.00e-107	381.00
IUUC-Cfa-021040	Canis familiaris	29.60	9.00e-105	372.00
IUUC-Cpo-022529	Cavia porcellus	31.63	4.00e-107	380.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	46.50	8.00e-36	140.00
IUUC-Csa-024205	Chlorocebus sabaeus	31.08	1.00e-111	394.00
IUUC-Cin-025560	Ciona intestinalis	27.42	3.00e-101	360.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	63.23	0.00e+00	1189.00
IUUC-Cne-027082	Cryptococcus neoformans	33.04	3.00e-136	477.00
IUUC-Cme-027159	Cyanidioschyzon merolae	24.76	8.00e-26	110.00
IUUC-Dre-028138	Danio rerio	28.66	5.00e-100	357.00
IUUC-Dno-029914	Dasypus novemcinctus	36.54	1.00e-43	169.00
IUUC-Dor-030685	Dipodomys ordii	32.71	3.00e-72	264.00
IUUC-Dse-031429	Dothistroma septosporum	53.46	0.00e+00	975.00
IUUC-Dme-031995	Drosophila melanogaster	25.11	3.00e-61	227.00
IUUC-Ete-033086	Echinops telfairi	32.11	5.00e-66	243.00
IUUC-Eca-034354	Equus caballus	30.93	1.00e-105	375.00
IUUC-Eeu-034832	Erinaceus europaeus	32.41	5.00e-65	240.00
IUUC-Fca-036136	Felis catus	29.28	2.00e-100	358.00
IUUC-Fal-036859	Ficedula albicollis	29.21	3.00e-107	380.00
IUUC-Fox-037863	Fusarium oxysporum	59.44	0.00e+00	1054.00
IUUC-Fso-038389	Fusarium solani	64.70	0.00e+00	1183.00
IUUC-Gmo-038711	Gadus morhua	28.63	8.00e-94	335.00
IUUC-Ggr-039820	Gaeumannomyces graminis	60.78	0.00e+00	1065.00
IUUC-Gga-040263	Gallus gallus	29.42	1.00e-108	385.00
IUUC-Gac-041291	Gasterosteus aculeatus	29.97	3.00e-113	400.00
IUUC-Gma-044328	Glycine max	30.10	8.00e-112	395.00
IUUC-Ggo-044693	Gorilla gorilla	30.74	2.00e-109	387.00
IUUC-Hsa-046048	Homo sapiens	30.74	2.00e-109	387.00
IUUC-Hvu-047608	Hordeum vulgare	30.06	2.00e-111	394.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	31.42	2.00e-118	417.00
IUUC-Kpa-049209	Komagataella pastoris	32.54	6.00e-141	492.00
IUUC-Lch-050085	Latimeria chalumnae	29.01	6.00e-103	366.00
IUUC-Lpe-050945	Leersia perrieri	30.05	3.00e-110	390.00
IUUC-Loc-052679	Lepisosteus oculatus	31.22	1.00e-123	435.00
IUUC-Laf-053685	Loxodonta africana	30.85	2.00e-100	358.00
IUUC-Mcc-055861	Macaca mulatta	30.74	7.00e-108	382.00
IUUC-Meu-056820	Macropus eugenii	28.99	1.00e-42	166.00
IUUC-Mor-057234	Magnaporthe oryzae	57.34	0.00e+00	1010.00
IUUC-Mpo-057456	Magnaporthe poae	61.92	0.00e+00	865.00
IUUC-Mtr-058122	Medicago truncatula	30.25	1.00e-113	401.00
IUUC-Mla-058980	Melampsora laricipopulina	30.74	4.00e-114	403.00
IUUC-Mga-060080	Meleagris gallopavo	28.88	4.00e-108	383.00
IUUC-Mvi-060338	Microbotryum violaceum	33.44	1.00e-144	505.00
IUUC-Mmr-060762	Microcebus murinus	30.22	6.00e-108	383.00
IUUC-Mdo-061975	Monodelphis domestica	29.16	1.00e-99	355.00
IUUC-Mmu-064038	Mus musculus	30.30	2.00e-108	384.00
IUUC-Mac-065189	Musa acuminata	28.13	1.00e-108	385.00
IUUC-Mpu-066526	Mustela putorius furo	30.67	3.00e-106	377.00
IUUC-Mlu-067716	Myotis lucifugus	30.41	3.00e-114	404.00
IUUC-Nfi-068474	Neosartorya fischeri	54.22	0.00e+00	951.00
IUUC-Ncr-068826	Neurospora crassa	60.13	0.00e+00	1064.00
IUUC-Nle-069832	Nomascus leucogenys	30.85	3.00e-111	393.00
IUUC-Opr-071183	Ochotona princeps	30.00	1.00e-101	362.00
IUUC-Ont-072371	Oreochromis niloticus	31.11	3.00e-116	410.00
IUUC-Oan-073491	Ornithorhynchus anatinus	28.24	3.00e-84	303.00
IUUC-Oba-075963	Oryza barthii	30.66	3.00e-108	384.00
IUUC-Obr-076173	Oryza brachyantha	30.29	6.00e-107	379.00
IUUC-Ogl-077692	Oryza glaberrima	30.55	3.00e-107	380.00
IUUC-Ogu-078965	Oryza glumaepatula	30.55	4.00e-108	383.00
IUUC-Oin-079708	Oryza indica	30.66	4.00e-108	383.00
IUUC-Olo-080679	Oryza longistaminata	30.31	2.00e-107	381.00
IUUC-Oni-082960	Oryza nivara	30.78	2.00e-108	385.00
IUUC-Opu-083282	Oryza punctata	29.60	5.00e-106	376.00
IUUC-Oru-085224	Oryza rufipogon	30.66	3.00e-108	384.00
IUUC-Osa-085320	Oryza sativa	30.66	3.00e-108	384.00
IUUC-Ola-086370	Oryzias latipes	25.36	2.00e-36	145.00
IUUC-Olu-087814	Ostreococcus lucimarinus	27.54	3.00e-78	284.00
IUUC-Oga-088458	Otolemur garnettii	31.18	2.00e-115	408.00
IUUC-Oar-090032	Ovis aries	28.67	3.00e-76	277.00
IUUC-Ptr-090749	Pan troglodytes	30.74	9.00e-111	392.00
IUUC-Pan-091691	Papio anubis	29.74	3.00e-100	357.00
IUUC-Psi-093200	Pelodiscus sinensis	28.90	4.00e-107	380.00
IUUC-Pma-094165	Petromyzon marinus	27.24	7.00e-77	279.00
IUUC-Pno-095048	Phaeosphaeria nodorum	58.56	0.00e+00	870.00
IUUC-Ppa-095336	Physcomitrella patens	30.11	3.00e-110	390.00
IUUC-Pfo-096132	Poecilia formosa	29.37	5.00e-104	370.00
IUUC-Pab-097855	Pongo abelii	30.74	8.00e-111	392.00
IUUC-Pop-099434	Populus trichocarpa	28.14	1.00e-98	352.00
IUUC-Pca-100232	Procavia capensis	32.01	7.00e-39	153.00
IUUC-Ppe-101665	Prunus persica	29.15	1.00e-108	385.00
IUUC-Pva-102178	Pteropus vampyrus	30.44	2.00e-108	384.00
IUUC-Pgr-103288	Puccinia graminis	28.74	1.00e-101	362.00
IUUC-Ptt-103808	Puccinia triticina	29.66	2.00e-89	321.00
IUUC-Pte-104205	Pyrenophora teres	59.51	0.00e+00	1048.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	57.64	0.00e+00	999.00
IUUC-Rno-105617	Rattus norvegicus	31.04	1.00e-109	389.00
IUUC-Sce-106281	Saccharomyces cerevisiae	33.48	9.00e-135	472.00
IUUC-Sha-107378	Sarcophilus harrisii	29.61	1.00e-99	355.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	39.39	1.00e-162	564.00
IUUC-Spo-108361	Schizosaccharomyces pombe	37.03	9.00e-148	514.00
IUUC-Smo-109257	Selaginella moellendorffii	32.14	9.00e-119	418.00
IUUC-Sit-110258	Setaria italica	30.80	1.00e-114	405.00
IUUC-Sly-111521	Solanum lycopersicum	28.74	4.00e-104	370.00
IUUC-Stu-112718	Solanum tuberosum	42.45	5.00e-26	107.00
IUUC-Sbi-114768	Sorghum bicolor	29.94	3.00e-112	397.00
IUUC-Sre-115159	Sporisorium reilianum	31.24	1.00e-96	345.00
IUUC-Ssc-116342	Sus scrofa	27.19	1.00e-51	195.00
IUUC-Tgu-117320	Taeniopygia guttata	28.82	7.00e-100	356.00
IUUC-Tru-118024	Takifugu rubripes	29.53	1.00e-105	375.00
IUUC-Tni-119971	Tetraodon nigroviridis	30.32	2.00e-105	374.00
IUUC-Tca-121248	Theobroma cacao	29.42	2.00e-108	384.00
IUUC-Tre-122079	Trichoderma reesei	63.38	0.00e+00	1140.00
IUUC-Tvi-122554	Trichoderma virens	62.21	0.00e+00	1132.00
IUUC-Tae-124473	Triticum aestivum	30.54	4.00e-112	396.00
IUUC-Tur-126436	Triticum urartu	29.96	6.00e-91	326.00
IUUC-Tme-126942	Tuber melanosporum	51.52	0.00e+00	794.00
IUUC-Ttr-128964	Tursiops truncatus	30.04	5.00e-106	376.00
IUUC-Uma-129473	Ustilago maydis	30.59	2.00e-102	364.00
IUUC-Vda-129749	Verticillium dahliae	64.00	0.00e+00	1049.00
IUUC-Vvi-131511	Vitis vinifera	28.74	2.00e-103	368.00
IUUC-Xtr-132816	Xenopus tropicalis	26.37	4.00e-80	290.00
IUUC-Xma-133672	Xiphophorus maculatus	29.77	5.00e-107	380.00
IUUC-Yli-134602	Yarrowia lipolytica	41.62	0.00e+00	639.00
IUUC-Zma-135559	Zea mays	30.62	8.00e-107	379.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence