iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050188

Ensembl Protein ID

ENSLACP00000004492.2

UniProt Accession

H3A4C1; H3A4C1_LATCH

Genbank Protein ID

ENSLACP00000004492

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01238447

Gene Name

VPS18

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000003998.2	ENSLACT00000004531.2	ENSLACP00000004492.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	68.65	0.00e+00	1228.00	IUUC-Hsa-046635

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MFLDPTGSHL LLALTTSECL YVNRNAQKVR SLSRWKGHLI ESVGWNKLLG TEASTGPILV 60
GTSQGQIFES EISNSEGSLF STNVDQYFRL VYTLHEEGNV SPVCCLEIER GVEEKYFIVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCGTCTGAA GATTTTTCTT GTATGTAGGG TTGATCCTGA CTGTTCTTAC CTTTTTTTTT 60
TCCCCCCTAG AATTGATTTG GGCAAACCAG ACCAGCCGAA CCAGATTGAG CTGGGAAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000547--Clathrin_H-chain/VPS_repeat
IPR007810--Pep3_Vps18
IPR011990--TPR-like_helical_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50236--CHCR

Pfam

PF00637--Clathrin
PF05131--Pep3_Vps18

Gene Ontology

GO:0005622--C:intracellular
GO:0045176--P:apical protein localization
GO:0015721--P:bile acid and bile salt transport
GO:0008333--P:endosome to lysosome transport
GO:0043485--P:endosome to pigment granule transport
GO:0048069--P:eye pigmentation
GO:0006886--P:intracellular protein transport
GO:0060036--P:notochord cell vacuolation
GO:0007634--P:optokinetic behavior
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000419	Aegilops tauschii	33.76	4.00e-123	436.00
IUUC-Aml-001240	Ailuropoda melanoleuca	68.31	0.00e+00	1254.00
IUUC-Atr-003125	Amborella trichopoda	33.23	2.00e-133	469.00
IUUC-Apl-004181	Anas platyrhynchos	80.66	0.00e+00	1464.00
IUUC-Aca-004437	Anolis carolinensis	77.35	0.00e+00	1394.00
IUUC-Aly-006046	Arabidopsis lyrata	36.59	7.00e-153	534.00
IUUC-Ath-006932	Arabidopsis thaliana	36.09	2.00e-148	519.00
IUUC-Ago-007800	Ashbya gossypii	26.00	9.00e-60	225.00
IUUC-Acl-008035	Aspergillus clavatus	32.97	1.00e-124	441.00
IUUC-Afl-008714	Aspergillus flavus	32.44	5.00e-118	419.00
IUUC-Afu-009063	Aspergillus fumigatus	33.33	3.00e-125	442.00
IUUC-Ani-009384	Aspergillus nidulans	33.48	6.00e-127	448.00
IUUC-Ang-009507	Aspergillus niger	32.89	7.00e-125	441.00
IUUC-Aor-010094	Aspergillus oryzae	32.44	9.00e-118	417.00
IUUC-Ate-010421	Aspergillus terreus	33.61	4.00e-115	409.00
IUUC-Ame-011797	Astyanax mexicanus	78.60	0.00e+00	1410.00
IUUC-Bgr-012107	Blumeria graminis	33.49	4.00e-116	412.00
IUUC-Bta-012339	Bos taurus	68.31	0.00e+00	1296.00
IUUC-Bci-013895	Botrytis cinerea	33.41	6.00e-130	458.00
IUUC-Bdi-014554	Brachypodium distachyon	35.12	5.00e-141	495.00
IUUC-Bol-015270	Brassica oleracea	37.24	9.00e-154	537.00
IUUC-Bra-017424	Brassica rapa	36.88	3.00e-148	519.00
IUUC-Cel-018455	Caenorhabditis elegans	26.12	4.00e-86	313.00
IUUC-Cja-019629	Callithrix jacchus	67.96	0.00e+00	1258.00
IUUC-Cfa-020425	Canis familiaris	68.42	0.00e+00	1245.00
IUUC-Cpo-021349	Cavia porcellus	67.77	0.00e+00	1235.00
IUUC-Cre-022799	Chlamydomonas reinhardtii	23.81	2.00e-34	141.00
IUUC-Csa-023559	Chlorocebus sabaeus	68.19	0.00e+00	1261.00
IUUC-Cho-024862	Choloepus hoffmanni	62.65	0.00e+00	872.00
IUUC-Cin-025599	Ciona intestinalis	43.84	0.00e+00	676.00
IUUC-Csv-026152	Ciona savignyi	47.67	0.00e+00	794.00
IUUC-Cgl-026551	Colletotrichum gloeosporioides	32.85	2.00e-117	416.00
IUUC-Cne-026907	Cryptococcus neoformans	32.48	7.00e-119	422.00
IUUC-Dre-027747	Danio rerio	77.80	0.00e+00	1433.00
IUUC-Dno-029668	Dasypus novemcinctus	67.54	0.00e+00	1243.00
IUUC-Dor-030404	Dipodomys ordii	67.96	0.00e+00	1262.00
IUUC-Dse-031345	Dothistroma septosporum	32.46	5.00e-128	452.00
IUUC-Dme-031711	Drosophila melanogaster	33.99	6.00e-150	525.00
IUUC-Ete-032308	Echinops telfairi	66.92	0.00e+00	727.00
IUUC-Eca-033637	Equus caballus	68.31	0.00e+00	1259.00
IUUC-Eeu-035151	Erinaceus europaeus	67.65	0.00e+00	1046.00
IUUC-Fca-035585	Felis catus	68.19	0.00e+00	1246.00
IUUC-Fal-037122	Ficedula albicollis	78.68	0.00e+00	1434.00
IUUC-Fox-038030	Fusarium oxysporum	34.87	7.00e-128	451.00
IUUC-Fso-038426	Fusarium solani	34.67	2.00e-132	466.00
IUUC-Gmo-038784	Gadus morhua	78.79	0.00e+00	1417.00
IUUC-Ggr-039973	Gaeumannomyces graminis	32.73	3.00e-124	439.00
IUUC-Gga-040692	Gallus gallus	80.78	0.00e+00	1467.00
IUUC-Gac-041868	Gasterosteus aculeatus	77.19	0.00e+00	1399.00
IUUC-Gma-044274	Glycine max	35.84	6.00e-151	528.00
IUUC-Ggo-045053	Gorilla gorilla	68.42	0.00e+00	1256.00
IUUC-Hsa-046635	Homo sapiens	68.42	0.00e+00	1256.00
IUUC-Hvu-047361	Hordeum vulgare	35.01	4.00e-141	495.00
IUUC-Itr-048868	Ictidomys tridecemlineatus	68.42	0.00e+00	1246.00
IUUC-Kpa-049270	Komagataella pastoris	26.09	8.00e-74	271.00
IUUC-Lpe-051026	Leersia perrieri	35.65	6.00e-146	511.00
IUUC-Loc-051821	Lepisosteus oculatus	80.46	0.00e+00	1451.00
IUUC-Lma-053178	Leptosphaeria maculans	35.35	1.00e-107	383.00
IUUC-Laf-053552	Loxodonta africana	67.96	0.00e+00	1251.00
IUUC-Mcc-054667	Macaca mulatta	68.19	0.00e+00	1252.00
IUUC-Meu-056422	Macropus eugenii	69.70	0.00e+00	685.00
IUUC-Mor-056981	Magnaporthe oryzae	33.58	6.00e-130	458.00
IUUC-Mtr-058703	Medicago truncatula	35.31	6.00e-143	501.00
IUUC-Mla-059088	Melampsora laricipopulina	35.07	1.00e-109	390.00
IUUC-Mga-059798	Meleagris gallopavo	80.66	0.00e+00	1467.00
IUUC-Mvi-060404	Microbotryum violaceum	35.27	9.00e-138	484.00
IUUC-Mmr-061630	Microcebus murinus	68.31	0.00e+00	1255.00
IUUC-Mdo-062354	Monodelphis domestica	67.62	0.00e+00	1287.00
IUUC-Mmu-063199	Mus musculus	67.51	0.00e+00	1249.00
IUUC-Mac-065595	Musa acuminata	37.61	2.00e-129	456.00
IUUC-Mpu-066596	Mustela putorius furo	68.65	0.00e+00	1265.00
IUUC-Mlu-067455	Myotis lucifugus	68.19	0.00e+00	1250.00
IUUC-Nfi-068565	Neosartorya fischeri	33.37	2.00e-126	446.00
IUUC-Ncr-068748	Neurospora crassa	33.59	8.00e-129	454.00
IUUC-Nle-068979	Nomascus leucogenys	69.88	0.00e+00	1116.00
IUUC-Opr-070711	Ochotona princeps	68.76	0.00e+00	1268.00
IUUC-Ont-072603	Oreochromis niloticus	77.54	0.00e+00	1417.00
IUUC-Oan-073136	Ornithorhynchus anatinus	67.28	0.00e+00	711.00
IUUC-Ocu-074496	Oryctolagus cuniculus	69.11	0.00e+00	1262.00
IUUC-Oba-075933	Oryza barthii	34.68	7.00e-130	458.00
IUUC-Obr-076290	Oryza brachyantha	36.02	2.00e-146	513.00
IUUC-Ogu-078728	Oryza glumaepatula	34.68	5.00e-130	458.00
IUUC-Oin-079954	Oryza indica	35.44	4.00e-137	482.00
IUUC-Olo-081033	Oryza longistaminata	33.41	3.00e-120	426.00
IUUC-Ome-081797	Oryza meridionalis	35.01	7.00e-141	494.00
IUUC-Oni-082802	Oryza nivara	34.68	5.00e-130	458.00
IUUC-Opu-083595	Oryza punctata	36.06	5.00e-146	511.00
IUUC-Oru-084199	Oryza rufipogon	34.68	5.00e-130	458.00
IUUC-Osa-085349	Oryza sativa	35.72	3.00e-144	506.00
IUUC-Ola-087482	Oryzias latipes	76.62	0.00e+00	1394.00
IUUC-Olu-087797	Ostreococcus lucimarinus	23.83	5.00e-68	253.00
IUUC-Oga-088817	Otolemur garnettii	68.31	0.00e+00	1264.00
IUUC-Oar-090350	Ovis aries	67.62	0.00e+00	965.00
IUUC-Ptr-090999	Pan troglodytes	68.42	0.00e+00	1254.00
IUUC-Pan-092704	Papio anubis	68.19	0.00e+00	1252.00
IUUC-Psi-093529	Pelodiscus sinensis	79.18	0.00e+00	1423.00
IUUC-Pma-094400	Petromyzon marinus	63.81	0.00e+00	1155.00
IUUC-Pno-094875	Phaeosphaeria nodorum	33.92	4.00e-127	449.00
IUUC-Ppa-095231	Physcomitrella patens	33.64	6.00e-144	504.00
IUUC-Pfo-096967	Poecilia formosa	77.31	0.00e+00	1413.00
IUUC-Pab-098300	Pongo abelii	68.08	0.00e+00	1253.00
IUUC-Pop-098966	Populus trichocarpa	35.63	3.00e-151	529.00
IUUC-Pca-100643	Procavia capensis	68.40	0.00e+00	1163.00
IUUC-Ppe-101589	Prunus persica	36.24	3.00e-149	522.00
IUUC-Pva-102766	Pteropus vampyrus	67.39	0.00e+00	1201.00
IUUC-Pgr-103330	Puccinia graminis	32.08	4.00e-120	426.00
IUUC-Ptt-103809	Puccinia triticina	33.79	5.00e-108	385.00
IUUC-Pte-104319	Pyrenophora teres	33.08	4.00e-128	452.00
IUUC-Pyt-104798	Pyrenophora triticirepentis	31.84	2.00e-115	410.00
IUUC-Rno-105817	Rattus norvegicus	67.62	0.00e+00	1244.00
IUUC-Sce-106255	Saccharomyces cerevisiae	25.96	4.00e-51	196.00
IUUC-Sha-107479	Sarcophilus harrisii	67.73	0.00e+00	1290.00
IUUC-Sja-107976	Schizosaccharomyces japonicus	26.51	4.00e-73	269.00
IUUC-Spo-108146	Schizosaccharomyces pombe	27.81	9.00e-82	298.00
IUUC-Ssl-108663	Sclerotinia sclerotiorum	32.93	8.00e-120	424.00
IUUC-Smo-109585	Selaginella moellendorffii	35.17	2.00e-126	446.00
IUUC-Sit-110275	Setaria italica	35.94	2.00e-141	496.00
IUUC-Sly-111073	Solanum lycopersicum	35.90	9.00e-149	521.00
IUUC-Stu-112392	Solanum tuberosum	29.20	7.00e-12	63.50
IUUC-Sar-113718	Sorex araneus	65.68	0.00e+00	1194.00
IUUC-Sbi-114080	Sorghum bicolor	35.73	3.00e-144	505.00
IUUC-Sre-115160	Sporisorium reilianum	33.44	9.00e-136	478.00
IUUC-Ssc-115997	Sus scrofa	68.19	0.00e+00	1252.00
IUUC-Tgu-116904	Taeniopygia guttata	80.76	0.00e+00	1454.00
IUUC-Tru-117946	Takifugu rubripes	75.14	0.00e+00	1375.00
IUUC-Tni-119692	Tetraodon nigroviridis	75.26	0.00e+00	1372.00
IUUC-Tca-121455	Theobroma cacao	35.52	7.00e-151	528.00
IUUC-Tre-122128	Trichoderma reesei	35.71	3.00e-126	446.00
IUUC-Tvi-122657	Trichoderma virens	34.97	2.00e-128	453.00
IUUC-Tae-125953	Triticum aestivum	35.44	4.00e-140	492.00
IUUC-Tur-126110	Triticum urartu	33.54	5.00e-112	399.00
IUUC-Tme-127173	Tuber melanosporum	30.55	2.00e-109	390.00
IUUC-Ttr-128420	Tursiops truncatus	67.85	0.00e+00	1278.00
IUUC-Uma-129580	Ustilago maydis	33.01	9.00e-134	471.00
IUUC-Vda-129790	Verticillium dahliae	31.93	2.00e-114	407.00
IUUC-Vvi-131095	Vitis vinifera	33.76	9.00e-143	501.00
IUUC-Xtr-131906	Xenopus tropicalis	74.94	0.00e+00	1366.00
IUUC-Xma-134197	Xiphophorus maculatus	76.97	0.00e+00	1407.00
IUUC-Yli-134617	Yarrowia lipolytica	28.51	2.00e-100	360.00
IUUC-Zma-134979	Zea mays	31.75	5.00e-108	385.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence