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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-104894
UUCD1 version UUC-RaN-01070
Ensembl Protein ID ENSRNOP00000060372.3
UniProt Accession F1LPJ7; F1LPJ7_RAT
Genbank Protein ID ENSRNOP00000060372
Protein Name Ubiquitinyl hydrolase 1
Genbank Nucleotide ID AABR07013807
Gene Name Usp33
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000011294.7 ENSRNOT00000066125.3 ENSRNOP00000060372.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
RAID2
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 2.00e-115 386.0 153 681
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   DUB/USP
   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw.kskkkavsprellkalkkeaeefsgye 88
           tGlkN+gNtCYmN++LQ+Lsn+p+l++++l+     +   +++++k +++ks+ kl++elw ks+ ++v p +l++ +k++++ f+gy+
   Q: 153  TGLKNIGNTCYMNAALQALSNCPPLTQFFLD-----CGGLARTDKKPAICKSYLKLMTELWhKSRPGSVVPANLFQGIKTVNPTFRGYS 236
           7******************************.....999999*******************99************************** PP
   S: 89   qqDaqEflaflldqleeelkk........eknkpkeeeeeedkselsde........................................ 129
           qqDaqEfl++l+d l+eelk+         +  + ee+ ee+ks++  +                                        
   Q: 237  QQDAQEFLRCLMDLLHEELKEqvmeieeePQALTSEETVEEEKSQS--Dvdfqscescssssekgenesvskggpedstettmliqdee 323
           *******************887776654433333333333333333..1569999********************************** PP
   S: 130  ......................................................................................... 129
                                                                                                    
   Q: 324  dlemakdwqkekmcnksnkadsdgepdkdrdtvcetvdlnsqetvkvqihgraseyitdvhlndlstpqilpsnesvnprlsasppksg 412
           ***************************************************************************************** PP
   S: 130  ..................aeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke............... 185
                             +++k++kk++s+isd+F+g++ s+++cl+cd+vs++ e+f+dlslp+pgke+ +k+               
   Q: 413  nlwpgltpphkkaqssspKRKKQHKKYRSVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLhssshptivkagscg 501
           ******************99*************************************************99888*************** PP
   S: 186  .................................slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfse 241
                                            +lqdcL++f++++el+g+n+y+cekckk+++ +k +k++k+Pe+L++hLkRf  ++
   Q: 502  eayapqgwiaffmeyvkrfvvscvpswfwgpvvTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRF--RH 588
           *************************************************************************************..99 PP
   S: 242  eqksrekinkkvefple.LdlspfctspeekqkekkkYeLiavvvHsGslssGHYvayvknekgk.WllfdDskVtevkeeevleetgs 328
           e ++++ki+++v+fple Ldl+pf+++++ +q   ++Y+L++v++H+G++ssGHY+ay++n+ ++ W++fdD++Vtev+e++v++   +
   Q: 589  ELMFSTKISTHVSFPLEgLDLQPFLAKDSPAQ--IVTYDLLSVICHHGTASSGHYIAYCRNNLNNlWYEFDDQSVTEVSESTVQN---A 672
           99*************************88777..9**************************88889*******************...* PP
   S: 329  taYvlfYkr 337
           +aYvlfY++
   Q: 673  EAYVLFYRK 681
           *******98 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MTTFRNHCPH LDSVGEITKE DLIQKSHGAC QDCKVRGPNL WACLENRCSY VGCGESQDHS 60
TIHSKKTKHY LTVNLTTLRV WCYACSKEVF LDRKLGTPPS LPHVRQPQQT QENSVQDFKI 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-104894|DUB,USP|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TATTTTATCT TTTGCTTTAA CCATTTTTGG CTTGCTAAGA ATTTGTAATT AAGTTTTGGG 60
TCACCTTTCC TGTAGGTTTT GCCTGATTGG AAAAGCCTTG AGAAAGAGAA AAAAAAAAAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-104894|DUB,USP|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR006615--Pept_C19_DUSP
IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP
PROSITE

PS51283--DUSP
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP
Pfam

PF06337--DUSP
PF00443--UCH
PF02148--zf-UBP
SMART

SM00695--DUSP
SM00290--ZnF_UBP
Gene Ontology

GO:0005776--C:autophagosome
GO:0044297--C:cell body
GO:0005813--C:centrosome
GO:0005925--C:focal adhesion
GO:0005794--C:Golgi apparatus
GO:0005654--C:nucleoplasm
GO:0048471--C:perinuclear region of cytoplasm
GO:0004197--F:cysteine-type endopeptidase activity
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0008270--F:zinc ion binding
GO:0007411--P:axon guidance
GO:0016477--P:cell migration
GO:0009267--P:cellular response to starvation
GO:0051298--P:centrosome duplication
GO:0032091--P:negative regulation of protein binding
GO:0032092--P:positive regulation of protein binding
GO:0071108--P:protein K48-linked deubiquitination
GO:0070536--P:protein K63-linked deubiquitination
GO:0050821--P:protein stabilization
GO:0010506--P:regulation of autophagy
GO:0008277--P:regulation of G-protein coupled receptor protein signaling pathway
GO:0006511--P:ubiquitin-dependent protein catabolic process
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001742 Ailuropoda melanoleuca 93.13 0.00e+00 1694.00
IUUC-Apl-003987 Anas platyrhynchos 81.07 0.00e+00 1435.00
IUUC-Aca-004713 Anolis carolinensis 76.45 0.00e+00 1391.00
IUUC-Ame-010697 Astyanax mexicanus 81.82 0.00e+00 851.00
IUUC-Bta-013132 Bos taurus 92.77 0.00e+00 1689.00
IUUC-Cel-018627 Caenorhabditis elegans 33.73 6.00e-38 152.00
IUUC-Cja-018811 Callithrix jacchus 93.20 0.00e+00 1710.00
IUUC-Cfa-021158 Canis familiaris 92.37 0.00e+00 1680.00
IUUC-Cpo-021910 Cavia porcellus 86.21 0.00e+00 1544.00
IUUC-Csa-023130 Chlorocebus sabaeus 93.42 0.00e+00 1711.00
IUUC-Cho-024383 Choloepus hoffmanni 72.04 1.00e-166 580.00
IUUC-Dre-028639 Danio rerio 69.75 0.00e+00 1211.00
IUUC-Dno-029416 Dasypus novemcinctus 91.02 0.00e+00 1629.00
IUUC-Ete-032994 Echinops telfairi 75.04 0.00e+00 779.00
IUUC-Eca-034248 Equus caballus 93.54 0.00e+00 1704.00
IUUC-Eeu-035357 Erinaceus europaeus 74.31 0.00e+00 1232.00
IUUC-Fca-036013 Felis catus 90.71 0.00e+00 1636.00
IUUC-Fal-037509 Ficedula albicollis 80.31 0.00e+00 1433.00
IUUC-Gmo-038944 Gadus morhua 65.81 0.00e+00 1180.00
IUUC-Gga-040647 Gallus gallus 80.11 0.00e+00 1412.00
IUUC-Gac-041752 Gasterosteus aculeatus 69.41 0.00e+00 1234.00
IUUC-Hsa-045694 Homo sapiens 92.87 0.00e+00 1696.00
IUUC-Itr-049041 Ictidomys tridecemlineatus 93.53 0.00e+00 1691.00
IUUC-Lch-050400 Latimeria chalumnae 69.93 0.00e+00 1237.00
IUUC-Loc-052616 Lepisosteus oculatus 71.79 0.00e+00 1298.00
IUUC-Laf-053493 Loxodonta africana 92.13 0.00e+00 1680.00
IUUC-Mcc-055542 Macaca mulatta 93.53 0.00e+00 1714.00
IUUC-Meu-056645 Macropus eugenii 73.06 0.00e+00 1246.00
IUUC-Mga-060019 Meleagris gallopavo 81.46 0.00e+00 1219.00
IUUC-Mmr-061241 Microcebus murinus 89.91 0.00e+00 1655.00
IUUC-Mmu-063786 Mus musculus 95.93 0.00e+00 1742.00
IUUC-Mpu-065772 Mustela putorius furo 92.92 0.00e+00 1404.00
IUUC-Mlu-067732 Myotis lucifugus 91.71 0.00e+00 1669.00
IUUC-Nle-069528 Nomascus leucogenys 92.43 0.00e+00 1705.00
IUUC-Opr-070606 Ochotona princeps 87.17 0.00e+00 1527.00
IUUC-Ont-071495 Oreochromis niloticus 71.05 0.00e+00 1238.00
IUUC-Oan-073695 Ornithorhynchus anatinus 82.40 0.00e+00 984.00
IUUC-Ocu-074457 Oryctolagus cuniculus 89.46 0.00e+00 1643.00
IUUC-Ola-086739 Oryzias latipes 68.91 0.00e+00 1259.00
IUUC-Oga-088720 Otolemur garnettii 92.33 0.00e+00 1709.00
IUUC-Oar-089921 Ovis aries 92.66 0.00e+00 1691.00
IUUC-Ptr-090526 Pan troglodytes 92.98 0.00e+00 1700.00
IUUC-Pan-092396 Papio anubis 92.68 0.00e+00 1704.00
IUUC-Psi-092971 Pelodiscus sinensis 81.31 0.00e+00 1484.00
IUUC-Pfo-097415 Poecilia formosa 69.93 0.00e+00 1244.00
IUUC-Pab-098740 Pongo abelii 93.31 0.00e+00 1732.00
IUUC-Pca-100598 Procavia capensis 83.27 0.00e+00 896.00
IUUC-Pva-102820 Pteropus vampyrus 88.31 0.00e+00 1401.00
IUUC-Sce-106176 Saccharomyces cerevisiae 31.62 3.00e-24 107.00
IUUC-Sha-107244 Sarcophilus harrisii 76.69 0.00e+00 1354.00
IUUC-Sar-113665 Sorex araneus 90.57 0.00e+00 1674.00
IUUC-Ssc-115793 Sus scrofa 90.81 0.00e+00 1621.00
IUUC-Tgu-117487 Taeniopygia guttata 81.13 0.00e+00 1405.00
IUUC-Tru-117694 Takifugu rubripes 69.08 0.00e+00 1257.00
IUUC-Tsy-119598 Tarsius syrichta 81.38 0.00e+00 1409.00
IUUC-Tni-120189 Tetraodon nigroviridis 67.06 0.00e+00 1181.00
IUUC-Tbe-128125 Tupaia belangeri 83.26 2.00e-107 384.00
IUUC-Ttr-128269 Tursiops truncatus 89.36 0.00e+00 1561.00
IUUC-Vpa-130598 Vicugna pacos 90.26 0.00e+00 1645.00
IUUC-Xtr-132044 Xenopus tropicalis 73.99 0.00e+00 1296.00
Created Date 25-Jun-2017

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