iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cme-027222

Ensembl Protein ID

CMD156CT

UniProt Accession

M1VAP0; M1VAP0_CYAM1

Genbank Protein ID

BAM79217.1

Protein Name

Coatomer protein complex, subunit alpha

Genbank Nucleotide ID

AP006486

Gene Name

CYME_CMD156C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CMD156C	CMD156CT	CMD156CT

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-37	124.6	91	126
UBD/Beta-Prp	2.70e-71	238.2	4	394

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH+d ++ ++f ++ + +vs+sdD t++vW++   +
   Q: 91   GHADYIRTVQFhHElPWIVSASDDQTVRVWNWQNRT 126
           8**********98889***************86655 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsps 105
           ++++++s+++ + f+p++++l+++  +g i++ d++  +++ ++ +he++v+ + f+p+++++v+g++D+ ikv+ +  + c+ tl+gh d++++++f+ +
   Q: 4    SFESKSSRVKGLSFHPKRPWLLASLHSGAIQLLDYRLATVIDTYHEHEGPVRGIAFHPSQPLFVSGGDDAKIKVFHYGLRRCLFTLTGHADYIRTVQFHHE 104
           6789999********************************************************************************************** PP
   S: 106  gdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl........................................ 166
             ++vs+s+d+t+rvw++++++cl  +lsgh++ v+c+++hp ++l+vs+slD+t+r+Wd+                                        
   Q: 105  LPWIVSASDDQTVRVWNWQNRTCLA-VLSGHNHYVMCASFHPAEDLVVSASLDQTIRVWDIsglgggsanaaqaiaavtaaglwgssananalapgrdqgt 204
           *************************.*************************************************************************** PP
   S: 167  ...........................................................ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwd 208
                                                                          +  tl+g ht+ v+++sf+++ + ++sg++d+t+klw 
   Q: 205  gfgtgsapwsalapqstgggmgapsmsgfggssgstlgsgaygggtggisgvierlgggLDVAVKFTLEG-HTRGVNWVSFHPSLPLIASGADDRTIKLWR 304
           ***********************************************88888887776444444455577.****************************** PP
   S: 209  lqtgec..vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwklkkne 298
           + +++   v+tl+gh +nv++v f+p+ + lvs s+D++ir+Wdl  + ++  + ++ ++++  av ++  + +++g  ds  +i+kl +++
   Q: 305  YTESRAweVDTLRGHVNNVSCVLFHPHLDVLVSNSEDKTIRVWDLSRRSCIAIYRREMDRFWILAV-HPRLSAMAAG-HDSGCMIFKLHRER 394
           *9777777**********************************************************.7777777776.67999999998765 PP

Organism

Cyanidioschyzon merolae

Protein Sequence
(Fasta)

MLVSFESKSS RVKGLSFHPK RPWLLASLHS GAIQLLDYRL ATVIDTYHEH EGPVRGIAFH 60
PSQPLFVSGG DDAKIKVFHY GLRRCLFTLT GHADYIRTVQ FHHELPWIVS ASDDQTVRVW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTTGTTT CGTTTGAGTC CAAGTCGAGC AGGGTAAAAG GCCTGTCTTT TCACCCGAAA 60
CGGCCGTGGC TGCTCGCATC GCTGCACTCT GGAGCTATCC AGTTGCTTGA TTATCGACTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR010714--Coatomer_asu_C
IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011044--Quino_amine_DH_bsu
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF06957--COPI_C
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

KEGG

cme:CYME_CMD156C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000201	Aegilops tauschii	40.63	3.00e-151	527.00
IUUC-Aml-001758	Ailuropoda melanoleuca	39.33	0.00e+00	656.00
IUUC-Atr-002493	Amborella trichopoda	39.23	8.00e-147	512.00
IUUC-Apl-003385	Anas platyrhynchos	39.43	1.00e-148	518.00
IUUC-Aca-005154	Anolis carolinensis	76.65	3.00e-82	295.00
IUUC-Aly-006020	Arabidopsis lyrata	39.80	1.00e-147	515.00
IUUC-Ath-007058	Arabidopsis thaliana	40.53	2.00e-147	514.00
IUUC-Ago-007992	Ashbya gossypii	37.26	1.00e-120	425.00
IUUC-Acl-008027	Aspergillus clavatus	39.59	1.00e-143	501.00
IUUC-Afl-008644	Aspergillus flavus	41.31	1.00e-142	498.00
IUUC-Afu-008964	Aspergillus fumigatus	40.27	8.00e-144	502.00
IUUC-Ani-009379	Aspergillus nidulans	40.88	6.00e-145	506.00
IUUC-Ang-009756	Aspergillus niger	40.56	1.00e-144	504.00
IUUC-Aor-010174	Aspergillus oryzae	41.31	1.00e-142	498.00
IUUC-Ate-010302	Aspergillus terreus	39.83	6.00e-144	503.00
IUUC-Ame-011229	Astyanax mexicanus	40.11	0.00e+00	665.00
IUUC-Bgr-012300	Blumeria graminis	39.65	4.00e-140	490.00
IUUC-Bta-012524	Bos taurus	39.60	0.00e+00	664.00
IUUC-Bci-013781	Botrytis cinerea	39.85	1.00e-144	504.00
IUUC-Bdi-014214	Brachypodium distachyon	39.91	3.00e-148	517.00
IUUC-Bol-015967	Brassica oleracea	38.53	0.00e+00	648.00
IUUC-Bra-017823	Brassica rapa	38.63	0.00e+00	647.00
IUUC-Cel-018115	Caenorhabditis elegans	36.66	3.00e-132	464.00
IUUC-Cja-019107	Callithrix jacchus	38.37	0.00e+00	645.00
IUUC-Cfa-020675	Canis familiaris	38.89	0.00e+00	633.00
IUUC-Cpo-021813	Cavia porcellus	39.71	0.00e+00	664.00
IUUC-Cre-022969	Chlamydomonas reinhardtii	41.21	0.00e+00	672.00
IUUC-Csa-023523	Chlorocebus sabaeus	39.30	0.00e+00	665.00
IUUC-Cho-024704	Choloepus hoffmanni	39.18	7.00e-66	243.00
IUUC-Cin-025572	Ciona intestinalis	42.99	0.00e+00	762.00
IUUC-Csv-025864	Ciona savignyi	38.77	8.00e-134	469.00
IUUC-Cgl-026510	Colletotrichum gloeosporioides	38.47	1.00e-141	495.00
IUUC-Cne-027053	Cryptococcus neoformans	39.91	3.00e-148	517.00
IUUC-Dre-027421	Danio rerio	33.17	0.00e+00	736.00
IUUC-Dno-029303	Dasypus novemcinctus	39.81	0.00e+00	664.00
IUUC-Dor-030290	Dipodomys ordii	69.46	3.00e-70	258.00
IUUC-Dse-031543	Dothistroma septosporum	40.41	7.00e-140	489.00
IUUC-Dme-031945	Drosophila melanogaster	38.03	4.00e-134	470.00
IUUC-Ete-032873	Echinops telfairi	37.13	2.00e-173	600.00
IUUC-Eca-033773	Equus caballus	39.30	0.00e+00	664.00
IUUC-Eeu-034874	Erinaceus europaeus	33.64	4.00e-68	251.00
IUUC-Fca-035739	Felis catus	39.29	0.00e+00	652.00
IUUC-Fal-037263	Ficedula albicollis	38.94	6.00e-85	306.00
IUUC-Fox-037738	Fusarium oxysporum	37.94	5.00e-141	493.00
IUUC-Fso-038153	Fusarium solani	38.45	2.00e-140	491.00
IUUC-Gmo-039602	Gadus morhua	39.35	0.00e+00	648.00
IUUC-Ggr-039931	Gaeumannomyces graminis	38.83	9.00e-143	499.00
IUUC-Gga-040590	Gallus gallus	39.30	0.00e+00	667.00
IUUC-Gac-041318	Gasterosteus aculeatus	40.62	0.00e+00	670.00
IUUC-Gma-043585	Glycine max	38.78	0.00e+00	648.00
IUUC-Ggo-045029	Gorilla gorilla	39.04	0.00e+00	658.00
IUUC-Hsa-046078	Homo sapiens	38.93	0.00e+00	657.00
IUUC-Hvu-047556	Hordeum vulgare	40.43	2.00e-150	524.00
IUUC-Itr-048881	Ictidomys tridecemlineatus	36.69	2.00e-86	311.00
IUUC-Kpa-049256	Komagataella pastoris	37.92	2.00e-125	441.00
IUUC-Lch-049706	Latimeria chalumnae	39.60	0.00e+00	658.00
IUUC-Lpe-051316	Leersia perrieri	41.84	7.00e-152	529.00
IUUC-Loc-051867	Lepisosteus oculatus	34.25	2.00e-77	281.00
IUUC-Lma-053138	Leptosphaeria maculans	39.09	5.00e-145	507.00
IUUC-Laf-053510	Loxodonta africana	39.81	0.00e+00	666.00
IUUC-Mcc-055836	Macaca mulatta	38.93	0.00e+00	657.00
IUUC-Meu-056238	Macropus eugenii	37.22	2.00e-99	355.00
IUUC-Mor-057172	Magnaporthe oryzae	38.27	8.00e-142	496.00
IUUC-Mpo-057300	Magnaporthe poae	38.63	8.00e-144	502.00
IUUC-Mtr-058423	Medicago truncatula	40.11	0.00e+00	641.00
IUUC-Mla-059019	Melampsora laricipopulina	39.97	4.00e-148	516.00
IUUC-Mga-059499	Meleagris gallopavo	39.32	0.00e+00	663.00
IUUC-Mvi-060336	Microbotryum violaceum	41.11	3.00e-153	533.00
IUUC-Mmr-061102	Microcebus murinus	39.33	0.00e+00	656.00
IUUC-Mdo-062594	Monodelphis domestica	33.99	0.00e+00	761.00
IUUC-Mmu-063736	Mus musculus	39.33	0.00e+00	657.00
IUUC-Mac-064481	Musa acuminata	41.06	8.00e-142	497.00
IUUC-Mpu-066701	Mustela putorius furo	39.92	0.00e+00	669.00
IUUC-Mlu-067392	Myotis lucifugus	39.73	0.00e+00	660.00
IUUC-Nfi-068270	Neosartorya fischeri	40.42	8.00e-144	502.00
IUUC-Ncr-068892	Neurospora crassa	39.12	1.00e-145	508.00
IUUC-Nle-069634	Nomascus leucogenys	40.03	2.00e-161	560.00
IUUC-Opr-070952	Ochotona princeps	35.58	1.00e-82	299.00
IUUC-Ont-072488	Oreochromis niloticus	40.00	0.00e+00	663.00
IUUC-Oan-073184	Ornithorhynchus anatinus	64.97	6.00e-64	234.00
IUUC-Ocu-074211	Oryctolagus cuniculus	39.30	0.00e+00	665.00
IUUC-Oba-075761	Oryza barthii	41.25	1.00e-150	525.00
IUUC-Obr-076251	Oryza brachyantha	40.06	8.00e-150	521.00
IUUC-Ogl-077364	Oryza glaberrima	41.25	2.00e-150	525.00
IUUC-Ogu-078257	Oryza glumaepatula	41.25	3.00e-150	523.00
IUUC-Oin-079274	Oryza indica	41.39	4.00e-151	526.00
IUUC-Olo-080466	Oryza longistaminata	41.25	1.00e-150	525.00
IUUC-Ome-081668	Oryza meridionalis	42.88	3.00e-150	523.00
IUUC-Oni-082874	Oryza nivara	41.25	2.00e-150	524.00
IUUC-Opu-083885	Oryza punctata	41.54	2.00e-150	524.00
IUUC-Oru-084274	Oryza rufipogon	41.25	9.00e-151	525.00
IUUC-Osa-085565	Oryza sativa	41.25	9.00e-151	525.00
IUUC-Ola-086921	Oryzias latipes	39.33	0.00e+00	652.00
IUUC-Olu-087639	Ostreococcus lucimarinus	41.26	3.00e-155	540.00
IUUC-Oga-087991	Otolemur garnettii	37.13	3.00e-170	590.00
IUUC-Oar-089590	Ovis aries	39.60	0.00e+00	663.00
IUUC-Ptr-090808	Pan troglodytes	39.04	0.00e+00	658.00
IUUC-Pan-092475	Papio anubis	39.35	2.00e-148	517.00
IUUC-Psi-093044	Pelodiscus sinensis	35.66	2.00e-141	494.00
IUUC-Pno-094839	Phaeosphaeria nodorum	39.38	4.00e-144	503.00
IUUC-Ppa-095254	Physcomitrella patens	40.15	8.00e-152	529.00
IUUC-Pfo-097493	Poecilia formosa	39.67	0.00e+00	667.00
IUUC-Pab-098497	Pongo abelii	39.30	0.00e+00	665.00
IUUC-Pop-100086	Populus trichocarpa	38.73	0.00e+00	642.00
IUUC-Pca-100413	Procavia capensis	78.43	1.00e-75	276.00
IUUC-Ppe-101899	Prunus persica	40.06	5.00e-149	520.00
IUUC-Pva-102126	Pteropus vampyrus	45.19	2.00e-103	368.00
IUUC-Pgr-103376	Puccinia graminis	40.56	5.00e-151	526.00
IUUC-Ptt-103978	Puccinia triticina	41.48	3.00e-150	524.00
IUUC-Pte-104126	Pyrenophora teres	38.81	5.00e-141	493.00
IUUC-Pyt-104778	Pyrenophora triticirepentis	33.99	7.00e-107	379.00
IUUC-Rno-105428	Rattus norvegicus	39.81	0.00e+00	665.00
IUUC-Sce-106464	Saccharomyces cerevisiae	36.52	3.00e-119	421.00
IUUC-Sha-107301	Sarcophilus harrisii	33.33	0.00e+00	728.00
IUUC-Sja-107961	Schizosaccharomyces japonicus	39.15	1.00e-141	495.00
IUUC-Spo-108217	Schizosaccharomyces pombe	41.08	3.00e-147	513.00
IUUC-Ssl-108643	Sclerotinia sclerotiorum	40.92	2.00e-144	504.00
IUUC-Smo-109458	Selaginella moellendorffii	40.54	1.00e-154	538.00
IUUC-Sit-109697	Setaria italica	41.58	3.00e-150	524.00
IUUC-Sly-111447	Solanum lycopersicum	39.74	5.00e-150	523.00
IUUC-Stu-112564	Solanum tuberosum	40.32	2.00e-152	531.00
IUUC-Sar-113313	Sorex araneus	39.71	6.00e-69	253.00
IUUC-Sbi-114388	Sorghum bicolor	40.60	6.00e-151	526.00
IUUC-Sre-115209	Sporisorium reilianum	39.28	2.00e-145	508.00
IUUC-Ssc-115933	Sus scrofa	39.60	0.00e+00	664.00
IUUC-Tgu-117109	Taeniopygia guttata	33.75	1.00e-64	238.00
IUUC-Tru-117772	Takifugu rubripes	39.77	0.00e+00	653.00
IUUC-Tsy-119105	Tarsius syrichta	39.00	7.00e-144	502.00
IUUC-Tni-120556	Tetraodon nigroviridis	33.33	2.00e-99	355.00
IUUC-Tca-120918	Theobroma cacao	41.06	4.00e-153	533.00
IUUC-Tre-121951	Trichoderma reesei	38.27	4.00e-141	493.00
IUUC-Tvi-122359	Trichoderma virens	38.14	9.00e-142	495.00
IUUC-Tae-125732	Triticum aestivum	40.63	3.00e-151	527.00
IUUC-Tur-126016	Triticum urartu	40.63	6.00e-151	526.00
IUUC-Tme-127170	Tuber melanosporum	40.18	6.00e-144	503.00
IUUC-Tbe-127882	Tupaia belangeri	77.84	1.00e-81	296.00
IUUC-Ttr-128217	Tursiops truncatus	39.40	5.00e-146	509.00
IUUC-Uma-129337	Ustilago maydis	39.86	3.00e-145	507.00
IUUC-Vda-129828	Verticillium dahliae	37.81	1.00e-140	491.00
IUUC-Vpa-130537	Vicugna pacos	39.23	0.00e+00	653.00
IUUC-Vvi-130958	Vitis vinifera	40.69	2.00e-150	524.00
IUUC-Xtr-132857	Xenopus tropicalis	31.85	0.00e+00	663.00
IUUC-Xma-133138	Xiphophorus maculatus	39.67	0.00e+00	667.00
IUUC-Yli-134399	Yarrowia lipolytica	36.30	1.00e-115	408.00
IUUC-Zma-134855	Zea mays	41.58	3.00e-151	527.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence