iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006253

UUCD1 version

UUC-ArL-00994

Ensembl Protein ID

fgenesh2_kg.7__793__AT4G33270.1

UniProt Accession

D7M8S7; D7M8S7_ARALL

Genbank Protein ID

EFH43449.1

Protein Name

CDC20.1

Genbank Nucleotide ID

GL348719

Gene Name

ARALYDRAFT_491360

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.7__793__AT4G33270.1	fgenesh2_kg.7__793__AT4G33270.1	fgenesh2_kg.7__793__AT4G33270.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.10e-30	102.5	263	293
E3 adaptor/Cullin RING/APC_C/CDC20	1.70e-125	419.0	128	434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gHt +v++l++  s+  l+sG++D+++++WD
   Q: 263  GHTQEVCGLKWsgSGQQLASGGNDNVVHIWD 293
           8**********976699************** PP

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 2    ekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladl.eekdlvtsvswieegtllavGtkkgev 78
           e+ ldap++ ddfylnLldW+s nvla+aL+++vylw+a+tg+ s+l  + eek  vts++w ++g ++avG +++ev
   Q: 128  ERTLDAPDIVDDFYLNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIdEEKGPVTSINWAPDGRHVAVGLNNSEV 205
           689***********************************************888999********************** PP
   S: 79   eiyDveekkkvrtl.tghsarvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasG 155
           +++D ++++++rtl  gh++rvg+L+Wn+++l++G+ dg i  +dvr++   ++t+++h+qevCGlkw+ ++++LasG
   Q: 206  QLWDSASNRQLRTLkGGHQSRVGSLAWNNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASG 283
           **************778************************************************************* PP
   S: 156  GnDnsvsvwdassse......PlkkfkehkaavkaiawsPwqkslLasGGGtaDrcikfwntltgalleeidtgsqvc 227
           GnDn+v++wd s  +       l++ +eh++avka+aw+P+q +lLa+GGG  Dr+ikfwnt tga+l+++dtgsqvc
   Q: 284  GNDNVVHIWDRSVASsnsntqWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVC 361
           **********87555455666889999*************************************************** PP
   S: 228  sllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaagDetlrfwklfdkk 300
           sllwsk+++el+s+hGf++n++tlwkyps+ k+ael+gh++Rvl++a spdg ++++aagDetlrfw++f   
   Q: 362  SLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNVFGVP 434
           **********************************************************************765 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDAGMNTSSH YKSQARCPLQ EHFLPRKTSK ENLDRFIPNR SAMDFDYAHF ALTEGRKGND 60
QTAAVSSPSK EAYRKQLAET MNLNHTRILA FRNKPQAPVE LLPSNHSASL HQQPKSVKPR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCATCAGCGA AGAAATTCTT CACTCGCTCT CTCCTCTGCT CGAATTTCGT TTAATCTTTT 60
AATATCCGTT TCTTTTATCA TCGCTTTTGT GTTTGTTTTT GGATTTTTGT TTGTGTTTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

aly:ARALYDRAFT_491360

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000638	Aegilops tauschii	70.09	0.00e+00	662.00
IUUC-Atr-002628	Amborella trichopoda	69.47	1.00e-174	605.00
IUUC-Apl-003255	Anas platyrhynchos	48.66	4.00e-109	387.00
IUUC-Aca-004920	Anolis carolinensis	48.33	2.00e-103	369.00
IUUC-Ath-006795	Arabidopsis thaliana	98.69	0.00e+00	937.00
IUUC-Bdi-014063	Brachypodium distachyon	70.13	0.00e+00	668.00
IUUC-Bol-015368	Brassica oleracea	94.63	0.00e+00	887.00
IUUC-Bra-016738	Brassica rapa	94.09	0.00e+00	881.00
IUUC-Cre-022701	Chlamydomonas reinhardtii	51.77	1.00e-119	422.00
IUUC-Cin-025675	Ciona intestinalis	48.04	2.00e-109	388.00
IUUC-Csv-026019	Ciona savignyi	47.27	2.00e-102	365.00
IUUC-Cme-027234	Cyanidioschyzon merolae	47.63	2.00e-98	352.00
IUUC-Dre-028026	Danio rerio	43.55	1.00e-103	369.00
IUUC-Gmo-039284	Gadus morhua	45.11	3.00e-102	364.00
IUUC-Gga-040790	Gallus gallus	49.14	4.00e-109	387.00
IUUC-Gma-043985	Glycine max	79.43	0.00e+00	710.00
IUUC-Hvu-047565	Hordeum vulgare	70.90	0.00e+00	655.00
IUUC-Lpe-050954	Leersia perrieri	69.34	4.00e-180	623.00
IUUC-Lma-052998	Leptosphaeria maculans	46.07	1.00e-93	336.00
IUUC-Mtr-057725	Medicago truncatula	78.51	0.00e+00	729.00
IUUC-Mga-060102	Meleagris gallopavo	49.14	7.00e-109	387.00
IUUC-Mac-064861	Musa acuminata	74.65	0.00e+00	672.00
IUUC-Ont-071660	Oreochromis niloticus	44.99	3.00e-99	355.00
IUUC-Oba-075514	Oryza barthii	70.40	0.00e+00	629.00
IUUC-Obr-076018	Oryza brachyantha	67.86	0.00e+00	652.00
IUUC-Ogl-077254	Oryza glaberrima	70.40	0.00e+00	630.00
IUUC-Ogu-078562	Oryza glumaepatula	70.19	0.00e+00	628.00
IUUC-Oin-080094	Oryza indica	70.40	0.00e+00	630.00
IUUC-Olo-080449	Oryza longistaminata	70.61	0.00e+00	637.00
IUUC-Ome-081186	Oryza meridionalis	69.21	0.00e+00	648.00
IUUC-Oni-082243	Oryza nivara	70.40	0.00e+00	630.00
IUUC-Opu-084007	Oryza punctata	69.98	0.00e+00	626.00
IUUC-Oru-084357	Oryza rufipogon	70.19	0.00e+00	627.00
IUUC-Osa-086094	Oryza sativa	70.19	0.00e+00	628.00
IUUC-Ola-086907	Oryzias latipes	47.26	3.00e-99	354.00
IUUC-Olu-087647	Ostreococcus lucimarinus	55.71	5.00e-133	467.00
IUUC-Pma-094187	Petromyzon marinus	45.52	1.00e-96	346.00
IUUC-Pno-094809	Phaeosphaeria nodorum	47.44	1.00e-94	339.00
IUUC-Ppa-095687	Physcomitrella patens	63.12	6.00e-153	533.00
IUUC-Pfo-097429	Poecilia formosa	40.90	7.00e-89	320.00
IUUC-Pop-098890	Populus trichocarpa	83.37	0.00e+00	764.00
IUUC-Ppe-101865	Prunus persica	79.87	0.00e+00	719.00
IUUC-Pte-104142	Pyrenophora teres	45.97	3.00e-94	338.00
IUUC-Pyt-104693	Pyrenophora triticirepentis	45.97	3.00e-94	338.00
IUUC-Sja-107919	Schizosaccharomyces japonicus	45.15	3.00e-94	338.00
IUUC-Spo-108075	Schizosaccharomyces pombe	44.71	5.00e-93	333.00
IUUC-Smo-108922	Selaginella moellendorffii	60.88	2.00e-155	541.00
IUUC-Sit-110032	Setaria italica	69.41	0.00e+00	644.00
IUUC-Sly-111202	Solanum lycopersicum	81.76	0.00e+00	745.00
IUUC-Stu-112676	Solanum tuberosum	77.90	0.00e+00	733.00
IUUC-Sbi-114558	Sorghum bicolor	70.46	0.00e+00	652.00
IUUC-Tru-118184	Takifugu rubripes	43.13	3.00e-90	324.00
IUUC-Tni-120474	Tetraodon nigroviridis	45.16	3.00e-94	338.00
IUUC-Tca-120949	Theobroma cacao	82.28	0.00e+00	786.00
IUUC-Tae-123918	Triticum aestivum	69.54	0.00e+00	659.00
IUUC-Tur-126193	Triticum urartu	71.40	0.00e+00	660.00
IUUC-Vvi-131245	Vitis vinifera	80.96	0.00e+00	697.00
IUUC-Xtr-131993	Xenopus tropicalis	49.16	2.00e-110	392.00
IUUC-Xma-133332	Xiphophorus maculatus	45.99	5.00e-105	374.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence