iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-087279

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04029004

Gene Name

STRN

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000012319.1	ENSORLT00000015423.1	ENSORLP00000015422.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-29	99.8	577	608
UBD/Beta-Prp	1.90e-56	191.7	567	787

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDl 30
           gHtdsv++l +     +l+s+s Dgt+++WD 
   Q: 577  GHTDSVWGLVYsgVHQRLLSCSADGTVRLWDA 608
           8********99652289**************5 PP

UBD/Beta-Prp

   S: 40   ttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvls...lsfsp.sgdklvsGshdrtirvwdle 124
           ++  l  +lsgh++ v+ + +s   + l+++s D+t+++wd st ++  ++ +++++      +++   ++ +lv+      i ++++e
   Q: 567  DPSVLRGELSGHTDSVWGLVYSGVHQRLLSCSADGTVRLWDASTTSPALAVFNENKNMGIpssVDLVCsESAHLVASFTNGEIGIFNME 655
           555667899**********************************99999999988888876333555554558888888999******** PP
   S: 125  tgqclee......tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklw 207
           t+q + +        s  +  +n v +hp+  + +++  Dr ++++d ++gkl++ +   h d+v+sl++d+ng +l+sgs+d +++lw
   Q: 656  TRQLVLSlesnleAGSYFQTYINKVLSHPTLPITITAQEDRHIKFFDNNSGKLIHSMVA-HLDAVTSLAVDPNGLYLMSGSHDCSIRLW 743
           *****99888866666668899*******99**************************98.***************************** PP
   S: 208  dlqtgecvrtlnght....dnvksvrfspnderlvsgssDgsir 247
           +l++++c++++++h+    + + +v+f+p + +++s+++D   +
   Q: 744  NLESKTCIQEFTAHRkkfeESIHDVAFHPSKGYIASAGADALAK 787
           ***************9999999****************997665 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

VSSPAGHRDC SPTASPSPAM DEQAGPGVFF NNNNNSVLPG GGKGPLPDGD AGEAARAQYS 60
IPGILHFLQH EWARFEVERA QWEVERAELQ AQIAFLQGER KGQENLKKDL VRRIKMLEYA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCGACACG GTTTTCGCCT TCTGTTGGTA TCGAGCCCAG CAGGTCATCG AGACTGCAGC 60
CCAACCGCTT CACCGAGCCC GGCCATGGAT GAACAGGCAG GGCCCGGCGT GTTCTTCAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR013258--Striatin_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08232--Striatin
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001899	Ailuropoda melanoleuca	72.29	0.00e+00	996.00
IUUC-Apl-003927	Anas platyrhynchos	71.00	0.00e+00	861.00
IUUC-Aca-004933	Anolis carolinensis	67.31	0.00e+00	896.00
IUUC-Ame-011605	Astyanax mexicanus	74.01	0.00e+00	1040.00
IUUC-Bta-013077	Bos taurus	70.18	0.00e+00	985.00
IUUC-Cja-018973	Callithrix jacchus	70.18	0.00e+00	984.00
IUUC-Cfa-020988	Canis familiaris	67.79	0.00e+00	866.00
IUUC-Cpo-022496	Cavia porcellus	70.43	0.00e+00	990.00
IUUC-Csa-023829	Chlorocebus sabaeus	70.00	0.00e+00	980.00
IUUC-Cin-025167	Ciona intestinalis	46.00	8.00e-172	597.00
IUUC-Dre-028560	Danio rerio	71.92	0.00e+00	954.00
IUUC-Dno-029742	Dasypus novemcinctus	67.77	0.00e+00	958.00
IUUC-Dor-030721	Dipodomys ordii	65.87	0.00e+00	897.00
IUUC-Dse-031486	Dothistroma septosporum	26.90	3.00e-34	140.00
IUUC-Eca-033760	Equus caballus	71.03	0.00e+00	906.00
IUUC-Eeu-034953	Erinaceus europaeus	77.72	8.00e-173	600.00
IUUC-Fca-036530	Felis catus	71.59	0.00e+00	927.00
IUUC-Fso-038364	Fusarium solani	44.55	2.00e-23	104.00
IUUC-Gmo-039094	Gadus morhua	74.01	0.00e+00	1029.00
IUUC-Gga-040132	Gallus gallus	72.30	0.00e+00	890.00
IUUC-Gac-041713	Gasterosteus aculeatus	83.40	0.00e+00	1162.00
IUUC-Ggo-045455	Gorilla gorilla	63.57	0.00e+00	853.00
IUUC-Hsa-046415	Homo sapiens	70.18	0.00e+00	983.00
IUUC-Lch-050475	Latimeria chalumnae	73.02	0.00e+00	1039.00
IUUC-Loc-051859	Lepisosteus oculatus	78.22	0.00e+00	1071.00
IUUC-Laf-053537	Loxodonta africana	71.19	0.00e+00	1005.00
IUUC-Mcc-055817	Macaca mulatta	72.41	0.00e+00	980.00
IUUC-Meu-055946	Macropus eugenii	57.35	4.00e-148	518.00
IUUC-Mor-057148	Magnaporthe oryzae	45.07	2.00e-17	84.30
IUUC-Mga-059694	Meleagris gallopavo	71.95	0.00e+00	868.00
IUUC-Mmr-060768	Microcebus murinus	71.27	0.00e+00	997.00
IUUC-Mdo-061901	Monodelphis domestica	66.63	0.00e+00	979.00
IUUC-Mmu-064154	Mus musculus	70.18	0.00e+00	985.00
IUUC-Mpu-065827	Mustela putorius furo	66.46	0.00e+00	980.00
IUUC-Mlu-067102	Myotis lucifugus	73.08	0.00e+00	981.00
IUUC-Ncr-068831	Neurospora crassa	40.59	7.00e-22	99.40
IUUC-Nle-070008	Nomascus leucogenys	71.45	0.00e+00	914.00
IUUC-Ont-072025	Oreochromis niloticus	85.48	0.00e+00	1196.00
IUUC-Oan-072950	Ornithorhynchus anatinus	71.75	0.00e+00	860.00
IUUC-Ocu-074316	Oryctolagus cuniculus	71.31	0.00e+00	898.00
IUUC-Oga-088284	Otolemur garnettii	70.56	0.00e+00	1004.00
IUUC-Oar-090304	Ovis aries	70.18	0.00e+00	987.00
IUUC-Ptr-091052	Pan troglodytes	70.30	0.00e+00	984.00
IUUC-Pan-092270	Papio anubis	69.77	0.00e+00	973.00
IUUC-Psi-093907	Pelodiscus sinensis	70.29	0.00e+00	806.00
IUUC-Pma-094286	Petromyzon marinus	62.57	8.00e-168	583.00
IUUC-Pfo-097042	Poecilia formosa	84.59	0.00e+00	1285.00
IUUC-Pab-098110	Pongo abelii	70.30	0.00e+00	984.00
IUUC-Pca-100266	Procavia capensis	60.93	0.00e+00	684.00
IUUC-Pva-102824	Pteropus vampyrus	69.09	0.00e+00	968.00
IUUC-Rno-105638	Rattus norvegicus	70.18	0.00e+00	991.00
IUUC-Sha-107004	Sarcophilus harrisii	67.32	0.00e+00	823.00
IUUC-Ssc-115280	Sus scrofa	70.71	0.00e+00	991.00
IUUC-Tgu-116759	Taeniopygia guttata	71.03	0.00e+00	877.00
IUUC-Tru-117944	Takifugu rubripes	84.46	0.00e+00	1176.00
IUUC-Tsy-119405	Tarsius syrichta	64.05	2.00e-138	486.00
IUUC-Tni-120571	Tetraodon nigroviridis	83.48	0.00e+00	1183.00
IUUC-Tre-122113	Trichoderma reesei	25.96	8.00e-38	152.00
IUUC-Tbe-127691	Tupaia belangeri	53.22	6.00e-142	498.00
IUUC-Vpa-130294	Vicugna pacos	71.99	0.00e+00	920.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence