iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114485

UUCD1 version

UUC-SoB-01039

Ensembl Protein ID

Sb02g043040.1

UniProt Accession

A0A1B6QGA5; A0A1B6QGA5_SORBI

Genbank Protein ID

KXG36949.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G418600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g043040	Sb02g043040.1	Sb02g043040.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	33.96	2.00e-57	223.00	IUUC-Hsa-046172

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGRKKSRPVR AAGAASAAAE ADPYAPSPSG STKRGTKGEA RRDVCVEVDR TTWAQADVDH 60
RDVAEVVLRD VSVSGDGDGE EGALEEAFGA STFSLRLRVR DAPEEGFRMG QWPVVPSDCV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGAGGA AGAAATCGCG GCCGGTTCGA GCTGCGGGCG CTGCCTCTGC GGCGGCCGAG 60
GCCGACCCCT ACGCGCCGAG CCCTAGCGGC AGCACGAAGC GTGGGACCAA GGGCGAGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR011990--TPR-like_helical_dom
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00249--PHD
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002896	Amborella trichopoda	43.56	0.00e+00	681.00
IUUC-Apl-003428	Anas platyrhynchos	34.64	4.00e-67	249.00
IUUC-Aca-004510	Anolis carolinensis	37.37	1.00e-63	238.00
IUUC-Aly-005691	Arabidopsis lyrata	44.40	0.00e+00	750.00
IUUC-Ath-007139	Arabidopsis thaliana	46.89	0.00e+00	795.00
IUUC-Ame-011882	Astyanax mexicanus	33.81	1.00e-70	261.00
IUUC-Bta-012528	Bos taurus	34.65	9.00e-69	255.00
IUUC-Bdi-014034	Brachypodium distachyon	62.48	0.00e+00	1243.00
IUUC-Bol-015555	Brassica oleracea	40.31	0.00e+00	644.00
IUUC-Bra-016916	Brassica rapa	44.80	0.00e+00	718.00
IUUC-Cja-019391	Callithrix jacchus	34.65	3.00e-68	253.00
IUUC-Cfa-020732	Canis familiaris	34.65	2.00e-68	254.00
IUUC-Cpo-021641	Cavia porcellus	34.44	3.00e-68	253.00
IUUC-Csa-023937	Chlorocebus sabaeus	34.65	3.00e-68	253.00
IUUC-Cho-024617	Choloepus hoffmanni	41.09	5.00e-35	143.00
IUUC-Cme-027178	Cyanidioschyzon merolae	31.14	3.00e-65	243.00
IUUC-Dre-028441	Danio rerio	32.70	5.00e-70	259.00
IUUC-Dno-029395	Dasypus novemcinctus	34.58	8.00e-68	252.00
IUUC-Dme-031785	Drosophila melanogaster	29.99	9.00e-45	175.00
IUUC-Ete-032502	Echinops telfairi	34.90	5.00e-56	213.00
IUUC-Eca-033455	Equus caballus	34.75	5.00e-38	153.00
IUUC-Eeu-034956	Erinaceus europaeus	31.49	1.00e-57	218.00
IUUC-Fca-035984	Felis catus	34.85	2.00e-68	253.00
IUUC-Fal-036811	Ficedula albicollis	34.79	9.00e-69	255.00
IUUC-Gmo-039126	Gadus morhua	33.20	1.00e-68	254.00
IUUC-Gga-041238	Gallus gallus	35.05	2.00e-69	257.00
IUUC-Gac-041614	Gasterosteus aculeatus	33.81	5.00e-70	259.00
IUUC-Gma-043259	Glycine max	42.74	0.00e+00	761.00
IUUC-Ggo-045213	Gorilla gorilla	32.78	2.00e-64	241.00
IUUC-Hsa-046172	Homo sapiens	34.65	7.00e-68	252.00
IUUC-Hvu-047286	Hordeum vulgare	59.52	9.00e-103	366.00
IUUC-Itr-048880	Ictidomys tridecemlineatus	34.85	5.00e-68	253.00
IUUC-Kpa-049196	Komagataella pastoris	34.16	1.00e-21	98.60
IUUC-Lch-050648	Latimeria chalumnae	33.33	3.00e-68	253.00
IUUC-Lpe-050871	Leersia perrieri	65.25	0.00e+00	1330.00
IUUC-Loc-051862	Lepisosteus oculatus	34.64	7.00e-70	259.00
IUUC-Laf-053851	Loxodonta africana	35.67	3.00e-67	249.00
IUUC-Mcc-055066	Macaca mulatta	34.65	3.00e-68	253.00
IUUC-Meu-056104	Macropus eugenii	31.11	6.00e-35	143.00
IUUC-Mtr-058336	Medicago truncatula	44.15	0.00e+00	776.00
IUUC-Mga-059775	Meleagris gallopavo	35.05	3.00e-69	256.00
IUUC-Mdo-062943	Monodelphis domestica	35.26	3.00e-71	263.00
IUUC-Mmu-064115	Mus musculus	34.44	7.00e-69	255.00
IUUC-Mac-064445	Musa acuminata	50.00	0.00e+00	640.00
IUUC-Mpu-066850	Mustela putorius furo	34.85	1.00e-68	254.00
IUUC-Mlu-067610	Myotis lucifugus	34.22	1.00e-65	245.00
IUUC-Nle-070055	Nomascus leucogenys	34.65	2.00e-68	254.00
IUUC-Ont-071526	Oreochromis niloticus	33.95	5.00e-70	259.00
IUUC-Oan-073609	Ornithorhynchus anatinus	34.68	5.00e-54	205.00
IUUC-Ocu-074042	Oryctolagus cuniculus	34.85	2.00e-69	257.00
IUUC-Oba-075121	Oryza barthii	66.54	0.00e+00	1296.00
IUUC-Obr-076312	Oryza brachyantha	64.96	0.00e+00	1368.00
IUUC-Ogl-077560	Oryza glaberrima	66.54	0.00e+00	1296.00
IUUC-Ogu-078746	Oryza glumaepatula	66.64	0.00e+00	1305.00
IUUC-Oin-080153	Oryza indica	67.94	0.00e+00	677.00
IUUC-Olo-080436	Oryza longistaminata	65.79	0.00e+00	1203.00
IUUC-Oni-082845	Oryza nivara	66.54	0.00e+00	1296.00
IUUC-Opu-083321	Oryza punctata	64.55	0.00e+00	1217.00
IUUC-Oru-084329	Oryza rufipogon	66.54	0.00e+00	1297.00
IUUC-Osa-085508	Oryza sativa	78.88	3.00e-100	356.00
IUUC-Olu-087671	Ostreococcus lucimarinus	34.53	2.00e-87	317.00
IUUC-Oar-090005	Ovis aries	34.85	6.00e-70	259.00
IUUC-Pan-092723	Papio anubis	34.84	4.00e-51	196.00
IUUC-Psi-093870	Pelodiscus sinensis	34.85	1.00e-68	254.00
IUUC-Pma-094750	Petromyzon marinus	40.00	9.00e-39	152.00
IUUC-Ppa-095619	Physcomitrella patens	38.16	9.00e-125	441.00
IUUC-Pfo-096833	Poecilia formosa	34.02	5.00e-70	259.00
IUUC-Pab-098544	Pongo abelii	34.65	3.00e-68	253.00
IUUC-Pop-099540	Populus trichocarpa	47.32	0.00e+00	840.00
IUUC-Ppe-102038	Prunus persica	45.62	0.00e+00	843.00
IUUC-Rno-104959	Rattus norvegicus	34.44	1.00e-68	254.00
IUUC-Sha-107078	Sarcophilus harrisii	35.26	1.00e-70	261.00
IUUC-Spo-108132	Schizosaccharomyces pombe	32.41	3.00e-28	120.00
IUUC-Smo-108991	Selaginella moellendorffii	42.06	1.00e-139	490.00
IUUC-Sit-110047	Setaria italica	85.01	0.00e+00	2449.00
IUUC-Sly-111232	Solanum lycopersicum	46.42	4.00e-176	611.00
IUUC-Sar-113738	Sorex araneus	33.90	2.00e-64	241.00
IUUC-Sre-115189	Sporisorium reilianum	38.89	3.00e-24	107.00
IUUC-Ssc-116362	Sus scrofa	34.65	4.00e-69	256.00
IUUC-Tgu-117188	Taeniopygia guttata	34.79	9.00e-69	255.00
IUUC-Tru-117637	Takifugu rubripes	33.47	5.00e-68	253.00
IUUC-Tni-119701	Tetraodon nigroviridis	34.50	5.00e-69	256.00
IUUC-Tca-121831	Theobroma cacao	46.50	0.00e+00	855.00
IUUC-Tae-123569	Triticum aestivum	62.86	0.00e+00	1181.00
IUUC-Tur-125964	Triticum urartu	61.88	0.00e+00	1041.00
IUUC-Tbe-127799	Tupaia belangeri	34.26	1.00e-51	198.00
IUUC-Uma-129442	Ustilago maydis	37.22	3.00e-25	110.00
IUUC-Vvi-131682	Vitis vinifera	42.61	6.00e-165	574.00
IUUC-Xtr-132232	Xenopus tropicalis	32.51	4.00e-57	216.00
IUUC-Xma-133291	Xiphophorus maculatus	34.02	9.00e-70	258.00
IUUC-Zma-135327	Zea mays	78.32	0.00e+00	1217.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence