iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050630

Ensembl Protein ID

ENSLACP00000014279.1

UniProt Accession

H3AXA8; H3AXA8_LATCH

Genbank Protein ID

ENSLACP00000014279

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01135335

Gene Name

KDM5A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000012566.1	ENSLACT00000014379.1	ENSLACP00000014279.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	9.60e-17	61.1	295	341

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           vClvCg+g+e++ +l+ C+ C++ +H  Cl ++  +++p+ + w CpkC 
   Q: 295  VCLVCGRGDEED-KLLLCDGCDDSYHTFCLIPP-LQDVPKGD-WRCPKCL 341
           8*********88.6*******************.*******7.******6 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

AMSSGMYSEF VAPPECLVFE PSWQDFSDPL GFINKIRPLA EKFGICKIRP PKDGQTAIYC 60
LFMKFKFTQH VIYMYKVSAL TRVKLNFLDQ LAKFWELQGS TLRIPHVERK LLDLYMLSKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAATGAGCT CCGGGATGTA CAGCGAGTTT GTGGCACCCC CTGAGTGCCT AGTCTTTGAG 60
CCCAGCTGGC AGGATTTCAG CGATCCACTT GGGTTCATCA ACAAGATCCG TCCGTTGGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000552	Aegilops tauschii	41.23	4.00e-95	343.00
IUUC-Aml-002061	Ailuropoda melanoleuca	74.49	0.00e+00	2055.00
IUUC-Atr-002595	Amborella trichopoda	35.19	2.00e-112	401.00
IUUC-Apl-004141	Anas platyrhynchos	75.52	0.00e+00	2079.00
IUUC-Aca-004952	Anolis carolinensis	74.45	0.00e+00	2070.00
IUUC-Ame-011323	Astyanax mexicanus	69.56	0.00e+00	1948.00
IUUC-Bta-012902	Bos taurus	73.92	0.00e+00	2060.00
IUUC-Bdi-014050	Brachypodium distachyon	34.75	9.00e-110	392.00
IUUC-Bol-015336	Brassica oleracea	33.64	6.00e-13	71.20
IUUC-Cja-018988	Callithrix jacchus	74.60	0.00e+00	1925.00
IUUC-Cfa-020212	Canis familiaris	74.00	0.00e+00	2044.00
IUUC-Cpo-022221	Cavia porcellus	76.63	0.00e+00	1412.00
IUUC-Csa-023575	Chlorocebus sabaeus	74.49	0.00e+00	2083.00
IUUC-Cho-024280	Choloepus hoffmanni	76.05	0.00e+00	1233.00
IUUC-Dre-027909	Danio rerio	71.35	0.00e+00	1493.00
IUUC-Dno-029473	Dasypus novemcinctus	75.07	0.00e+00	2011.00
IUUC-Eca-034265	Equus caballus	74.04	0.00e+00	2058.00
IUUC-Fca-035476	Felis catus	74.68	0.00e+00	2053.00
IUUC-Fal-037078	Ficedula albicollis	75.36	0.00e+00	1952.00
IUUC-Gga-040466	Gallus gallus	75.38	0.00e+00	2148.00
IUUC-Gac-042566	Gasterosteus aculeatus	71.01	0.00e+00	1900.00
IUUC-Gma-044327	Glycine max	35.73	4.00e-97	350.00
IUUC-Ggo-044524	Gorilla gorilla	73.46	0.00e+00	1704.00
IUUC-Hsa-045821	Homo sapiens	74.63	0.00e+00	2066.00
IUUC-Hvu-047583	Hordeum vulgare	40.51	1.00e-14	75.10
IUUC-Kpa-049245	Komagataella pastoris	24.41	3.00e-22	101.00
IUUC-Lpe-051537	Leersia perrieri	40.84	2.00e-89	324.00
IUUC-Loc-051963	Lepisosteus oculatus	72.04	0.00e+00	1936.00
IUUC-Laf-053918	Loxodonta africana	71.83	0.00e+00	1937.00
IUUC-Mcc-055672	Macaca mulatta	74.42	0.00e+00	2078.00
IUUC-Mga-059192	Meleagris gallopavo	67.01	0.00e+00	1739.00
IUUC-Mmr-060968	Microcebus murinus	74.70	0.00e+00	2047.00
IUUC-Mdo-062945	Monodelphis domestica	75.08	0.00e+00	2078.00
IUUC-Mmu-063614	Mus musculus	74.02	0.00e+00	2060.00
IUUC-Mac-065069	Musa acuminata	32.74	2.00e-07	52.40
IUUC-Mpu-066349	Mustela putorius furo	74.56	0.00e+00	2054.00
IUUC-Mlu-067363	Myotis lucifugus	75.03	0.00e+00	2098.00
IUUC-Nle-070142	Nomascus leucogenys	74.49	0.00e+00	2075.00
IUUC-Ont-072471	Oreochromis niloticus	74.37	0.00e+00	1704.00
IUUC-Oan-072797	Ornithorhynchus anatinus	66.72	0.00e+00	1664.00
IUUC-Ocu-074164	Oryctolagus cuniculus	73.70	0.00e+00	2229.00
IUUC-Oba-075388	Oryza barthii	30.11	2.00e-77	285.00
IUUC-Obr-076296	Oryza brachyantha	39.91	2.00e-87	318.00
IUUC-Ogl-077886	Oryza glaberrima	38.83	2.00e-15	78.20
IUUC-Ogu-079040	Oryza glumaepatula	30.00	2.00e-77	284.00
IUUC-Olo-080668	Oryza longistaminata	38.83	5.00e-15	77.80
IUUC-Ome-081764	Oryza meridionalis	31.62	1.00e-90	328.00
IUUC-Oni-083012	Oryza nivara	30.00	3.00e-77	284.00
IUUC-Opu-083164	Oryza punctata	39.78	6.00e-86	313.00
IUUC-Oru-084630	Oryza rufipogon	30.26	6.00e-77	283.00
IUUC-Osa-085487	Oryza sativa	38.83	2.00e-15	78.20
IUUC-Ola-087076	Oryzias latipes	69.72	0.00e+00	1882.00
IUUC-Oga-088350	Otolemur garnettii	72.53	0.00e+00	1984.00
IUUC-Oar-090045	Ovis aries	73.85	0.00e+00	2060.00
IUUC-Ptr-091199	Pan troglodytes	75.14	0.00e+00	2068.00
IUUC-Pan-092094	Papio anubis	73.43	0.00e+00	2042.00
IUUC-Psi-093550	Pelodiscus sinensis	75.50	0.00e+00	2047.00
IUUC-Pfo-097266	Poecilia formosa	73.92	0.00e+00	1700.00
IUUC-Pab-098576	Pongo abelii	74.56	0.00e+00	2064.00
IUUC-Pca-100123	Procavia capensis	73.97	0.00e+00	1244.00
IUUC-Ppe-101504	Prunus persica	43.68	3.00e-97	350.00
IUUC-Pva-103109	Pteropus vampyrus	69.87	0.00e+00	1907.00
IUUC-Rno-105664	Rattus norvegicus	74.15	0.00e+00	2054.00
IUUC-Sce-106207	Saccharomyces cerevisiae	34.60	9.00e-72	265.00
IUUC-Sha-107506	Sarcophilus harrisii	76.06	0.00e+00	1837.00
IUUC-Smo-108843	Selaginella moellendorffii	56.25	2.00e-11	64.70
IUUC-Sit-110534	Setaria italica	34.47	1.00e-108	389.00
IUUC-Sly-111298	Solanum lycopersicum	42.66	3.00e-99	357.00
IUUC-Sar-113052	Sorex araneus	73.46	0.00e+00	2033.00
IUUC-Sre-115161	Sporisorium reilianum	38.69	8.00e-102	366.00
IUUC-Tgu-116613	Taeniopygia guttata	75.74	0.00e+00	2100.00
IUUC-Tru-118604	Takifugu rubripes	70.96	0.00e+00	1945.00
IUUC-Tni-120779	Tetraodon nigroviridis	70.74	0.00e+00	1936.00
IUUC-Tca-121478	Theobroma cacao	43.11	7.00e-102	366.00
IUUC-Tae-125894	Triticum aestivum	42.67	3.00e-96	347.00
IUUC-Tur-126632	Triticum urartu	41.74	5.00e-95	343.00
IUUC-Ttr-129242	Tursiops truncatus	73.07	0.00e+00	2003.00
IUUC-Uma-129590	Ustilago maydis	34.13	2.00e-120	427.00
IUUC-Vpa-130429	Vicugna pacos	71.04	0.00e+00	1143.00
IUUC-Xtr-131762	Xenopus tropicalis	67.12	0.00e+00	1755.00
IUUC-Xma-133693	Xiphophorus maculatus	73.61	0.00e+00	1711.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence