iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-117019

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01011182

Gene Name

LNX1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000007807.1	ENSTGUT00000008141.1	ENSTGUP00000008056.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	74.13	0.00e+00	1046.00	IUUC-Hsa-046470
E3 activity/RING/RING	72.18	0.00e+00	1019.00	IUUC-Mmu-063364
E3 activity/RING/RING	61.71	0.00e+00	874.00	IUUC-Dre-028841

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

PLCVTCGQAH LPEENHLYSY TEEVDDDLIC HICLQPLLQP LDTLCGHTFC TACLTNFLVE 60
KDFCPMDRKL VILQTCRKSS ILVNNLLDKL MVSCPFTEHC SEVVQRGHLE QHFQTQCKGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCACTCTGTG TCACCTGCGG CCAAGCGCAT TTACCGGAAG AAAACCACTT GTACAGCTAC 60
ACCGAAGAAG TAGATGATGA TCTGATATGC CACATTTGCC TGCAACCTTT GCTTCAGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001478--PDZ
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50106--PDZ
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00595--PDZ
PF13445--zf-RING_UBOX

SMART

SM00228--PDZ
SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0051260--P:protein homooligomerization
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002005	Ailuropoda melanoleuca	71.87	0.00e+00	962.00
IUUC-Apl-003561	Anas platyrhynchos	91.68	0.00e+00	1306.00
IUUC-Aca-005346	Anolis carolinensis	79.86	0.00e+00	1139.00
IUUC-Afl-008741	Aspergillus flavus	36.11	2.00e-12	64.70
IUUC-Afu-008782	Aspergillus fumigatus	34.85	7.00e-13	68.20
IUUC-Bta-012970	Bos taurus	73.68	0.00e+00	1016.00
IUUC-Cja-019412	Callithrix jacchus	73.57	0.00e+00	1003.00
IUUC-Cfa-020735	Canis familiaris	73.85	0.00e+00	1043.00
IUUC-Cpo-022198	Cavia porcellus	65.37	0.00e+00	857.00
IUUC-Cne-026870	Cryptococcus neoformans	39.17	9.00e-17	81.60
IUUC-Dre-028841	Danio rerio	54.68	7.00e-34	135.00
IUUC-Dno-028889	Dasypus novemcinctus	74.23	0.00e+00	1066.00
IUUC-Dor-030810	Dipodomys ordii	64.04	0.00e+00	714.00
IUUC-Fca-036264	Felis catus	73.33	0.00e+00	989.00
IUUC-Fal-037198	Ficedula albicollis	97.36	0.00e+00	1429.00
IUUC-Gga-040766	Gallus gallus	85.32	0.00e+00	1283.00
IUUC-Ggo-045057	Gorilla gorilla	73.85	0.00e+00	1025.00
IUUC-Hsa-046470	Homo sapiens	74.13	0.00e+00	1048.00
IUUC-Itr-048393	Ictidomys tridecemlineatus	74.27	0.00e+00	1055.00
IUUC-Kpa-049340	Komagataella pastoris	34.02	3.00e-09	56.20
IUUC-Lch-050081	Latimeria chalumnae	68.66	0.00e+00	1011.00
IUUC-Loc-052884	Lepisosteus oculatus	64.22	0.00e+00	917.00
IUUC-Laf-054498	Loxodonta africana	74.83	0.00e+00	1050.00
IUUC-Mla-059113	Melampsora laricipopulina	35.00	1.00e-10	60.50
IUUC-Mga-059504	Meleagris gallopavo	89.06	0.00e+00	1315.00
IUUC-Mmr-060696	Microcebus murinus	54.60	0.00e+00	645.00
IUUC-Mdo-062731	Monodelphis domestica	76.39	0.00e+00	1102.00
IUUC-Mmu-063364	Mus musculus	72.18	0.00e+00	1024.00
IUUC-Mpu-066626	Mustela putorius furo	73.44	0.00e+00	1016.00
IUUC-Mlu-068207	Myotis lucifugus	72.92	0.00e+00	1026.00
IUUC-Nle-069304	Nomascus leucogenys	74.13	0.00e+00	1045.00
IUUC-Opr-071080	Ochotona princeps	63.19	0.00e+00	889.00
IUUC-Ont-072002	Oreochromis niloticus	59.28	0.00e+00	817.00
IUUC-Ola-086477	Oryzias latipes	60.27	0.00e+00	848.00
IUUC-Oga-089142	Otolemur garnettii	71.53	0.00e+00	979.00
IUUC-Oar-090359	Ovis aries	73.02	0.00e+00	1003.00
IUUC-Ptr-090797	Pan troglodytes	73.85	0.00e+00	1045.00
IUUC-Pan-091910	Papio anubis	73.40	0.00e+00	1038.00
IUUC-Psi-093386	Pelodiscus sinensis	83.87	0.00e+00	1130.00
IUUC-Pfo-096370	Poecilia formosa	60.19	0.00e+00	816.00
IUUC-Pab-097761	Pongo abelii	73.84	0.00e+00	812.00
IUUC-Pva-102443	Pteropus vampyrus	72.81	0.00e+00	800.00
IUUC-Pgr-103416	Puccinia graminis	34.95	4.00e-13	68.90
IUUC-Rno-106030	Rattus norvegicus	72.32	0.00e+00	1019.00
IUUC-Sha-107609	Sarcophilus harrisii	76.94	0.00e+00	1101.00
IUUC-Sar-113333	Sorex araneus	72.25	0.00e+00	1021.00
IUUC-Ssc-116222	Sus scrofa	66.99	0.00e+00	894.00
IUUC-Tru-118481	Takifugu rubripes	61.51	0.00e+00	857.00
IUUC-Tni-119796	Tetraodon nigroviridis	58.38	6.00e-143	500.00
IUUC-Tbe-127538	Tupaia belangeri	71.35	0.00e+00	984.00
IUUC-Ttr-128787	Tursiops truncatus	73.33	0.00e+00	978.00
IUUC-Xtr-132476	Xenopus tropicalis	65.93	0.00e+00	891.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence