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Tag Content
UUCD2 ID IUUC-Cin-025324
UUCD1 version UUC-CiI-00535
Ensembl Protein ID ENSCINP00000018875.3
UniProt Accession Q4H3S8; Q4H3S8_CIOIN
Genbank Protein ID BAE06349.1
Protein Name Cockayne syndrome 1 homolog
Genbank Nucleotide ID EAAA01002171
Gene Name ckn1; Ci-CKN1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSCING00000009288.3 ENSCINT00000018875.3 ENSCINP00000018875.3
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.60e-30 102.5 190 226
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgv 34
           gH d v c+++   d   l+sGs D+ + +WD+r+ +
   Q: 190  GHRDTVLCVKWspKDeYVLASGSEDNRVLLWDVRQAK 226
           8***********8555779**************9865 PP
   
Organism Ciona intestinalis
Protein Sequence
(Fasta)
MSYCTTLHSD RSLGTRNPRW LCRSIELGRI LRLTLSETRI QCIPPNSISA MDLEKTECRY 60
LICAGSDKKI TIYDTWKLAR DESSQGGLPK IATIGSKTRQ KKYMHKSTMS SIQWYPHDTG 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cin-025324|E3,WD_repeat|Ciona intestinalis
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTCCTACT GCACAACATT ACATTCAGAT AGAAGTTTAG GGACTCGCAA CCCAAGGTGG 60
TTATGTAGAT CAATAGAACT GGGTCGTATT TTGAGGTACG GTATATTATT TAATTATATG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cin-025324|E3,WD_repeat|Ciona intestinalis
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
KEGG cin:100169886
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001170 Aegilops tauschii 28.57 5.00e-26 112.00
IUUC-Aml-002201 Ailuropoda melanoleuca 39.04 2.00e-83 301.00
IUUC-Atr-002784 Amborella trichopoda 36.12 2.00e-36 145.00
IUUC-Apl-003202 Anas platyrhynchos 41.48 2.00e-84 304.00
IUUC-Aca-004708 Anolis carolinensis 43.71 9.00e-81 292.00
IUUC-Aly-006144 Arabidopsis lyrata 28.01 1.00e-41 162.00
IUUC-Ath-007489 Arabidopsis thaliana 28.07 3.00e-38 151.00
IUUC-Acl-008195 Aspergillus clavatus 29.30 2.00e-26 112.00
IUUC-Afl-008406 Aspergillus flavus 28.52 1.00e-25 109.00
IUUC-Afu-008759 Aspergillus fumigatus 27.68 3.00e-27 114.00
IUUC-Ani-009380 Aspergillus nidulans 28.73 1.00e-25 109.00
IUUC-Ang-009820 Aspergillus niger 27.73 2.00e-26 112.00
IUUC-Aor-010092 Aspergillus oryzae 27.51 8.00e-28 116.00
IUUC-Ate-010491 Aspergillus terreus 28.94 3.00e-28 118.00
IUUC-Bta-012825 Bos taurus 38.65 1.00e-81 295.00
IUUC-Bci-013856 Botrytis cinerea 28.25 2.00e-37 148.00
IUUC-Bdi-014899 Brachypodium distachyon 37.89 3.00e-33 135.00
IUUC-Bol-015337 Brassica oleracea 29.28 4.00e-47 180.00
IUUC-Bra-018089 Brassica rapa 30.29 2.00e-48 185.00
IUUC-Cja-018725 Callithrix jacchus 39.80 8.00e-83 299.00
IUUC-Cfa-021162 Canis familiaris 39.10 3.00e-83 300.00
IUUC-Cpo-022190 Cavia porcellus 39.10 2.00e-82 298.00
IUUC-Cre-022960 Chlamydomonas reinhardtii 32.77 5.00e-29 120.00
IUUC-Csa-023610 Chlorocebus sabaeus 39.15 5.00e-82 296.00
IUUC-Cho-024689 Choloepus hoffmanni 40.27 3.00e-78 283.00
IUUC-Csv-026059 Ciona savignyi 75.74 7.00e-178 615.00
IUUC-Cgl-026384 Colletotrichum gloeosporioides 28.12 3.00e-28 118.00
IUUC-Cme-027182 Cyanidioschyzon merolae 29.01 2.00e-15 76.30
IUUC-Dre-028696 Danio rerio 41.06 1.00e-85 308.00
IUUC-Dno-029102 Dasypus novemcinctus 39.21 3.00e-82 297.00
IUUC-Dor-030361 Dipodomys ordii 37.50 4.00e-60 223.00
IUUC-Dse-031167 Dothistroma septosporum 31.15 7.00e-36 143.00
IUUC-Ete-032856 Echinops telfairi 32.58 1.00e-58 219.00
IUUC-Eca-033611 Equus caballus 39.94 3.00e-75 273.00
IUUC-Eeu-034583 Erinaceus europaeus 26.93 3.00e-37 147.00
IUUC-Fca-036481 Felis catus 39.35 2.00e-84 304.00
IUUC-Fal-037327 Ficedula albicollis 42.74 1.00e-79 288.00
IUUC-Fox-037684 Fusarium oxysporum 27.88 3.00e-31 127.00
IUUC-Fso-038306 Fusarium solani 28.12 7.00e-40 156.00
IUUC-Gmo-039043 Gadus morhua 38.96 2.00e-84 304.00
IUUC-Ggr-039783 Gaeumannomyces graminis 28.01 5.00e-27 114.00
IUUC-Gga-041085 Gallus gallus 41.71 1.00e-77 281.00
IUUC-Gac-042328 Gasterosteus aculeatus 41.23 5.00e-79 286.00
IUUC-Gma-043004 Glycine max 30.79 6.00e-47 180.00
IUUC-Ggo-045627 Gorilla gorilla 35.38 2.00e-67 247.00
IUUC-Hsa-046028 Homo sapiens 39.15 5.00e-82 296.00
IUUC-Hvu-047678 Hordeum vulgare 29.39 7.00e-28 116.00
IUUC-Itr-048648 Ictidomys tridecemlineatus 39.15 2.00e-83 301.00
IUUC-Kpa-049386 Komagataella pastoris 27.82 3.00e-39 154.00
IUUC-Lch-050590 Latimeria chalumnae 42.03 2.00e-68 250.00
IUUC-Lpe-051725 Leersia perrieri 30.82 1.00e-26 112.00
IUUC-Loc-051788 Lepisosteus oculatus 41.06 1.00e-86 311.00
IUUC-Lma-053082 Leptosphaeria maculans 31.35 2.00e-44 171.00
IUUC-Laf-053809 Loxodonta africana 39.55 5.00e-82 296.00
IUUC-Mcc-054998 Macaca mulatta 40.57 8.00e-63 232.00
IUUC-Meu-055929 Macropus eugenii 40.97 7.00e-74 269.00
IUUC-Mor-057003 Magnaporthe oryzae 29.39 1.00e-33 135.00
IUUC-Mtr-057921 Medicago truncatula 28.30 4.00e-30 124.00
IUUC-Mga-059449 Meleagris gallopavo 31.79 1.00e-47 182.00
IUUC-Mmr-061609 Microcebus murinus 37.25 3.00e-73 267.00
IUUC-Mdo-062564 Monodelphis domestica 39.95 3.00e-84 303.00
IUUC-Mmu-063904 Mus musculus 38.65 3.00e-81 293.00
IUUC-Mac-064716 Musa acuminata 26.67 9.00e-38 149.00
IUUC-Mpu-066617 Mustela putorius furo 39.04 3.00e-83 300.00
IUUC-Mlu-067054 Myotis lucifugus 39.30 6.00e-83 299.00
IUUC-Nfi-068467 Neosartorya fischeri 29.23 5.00e-23 100.00
IUUC-Nle-069731 Nomascus leucogenys 39.15 5.00e-82 296.00
IUUC-Opr-070297 Ochotona princeps 24.36 3.00e-16 78.20
IUUC-Ont-072558 Oreochromis niloticus 41.79 1.00e-80 291.00
IUUC-Ocu-074415 Oryctolagus cuniculus 38.25 4.00e-82 296.00
IUUC-Oba-075759 Oryza barthii 37.37 7.00e-33 133.00
IUUC-Obr-076387 Oryza brachyantha 37.02 2.00e-34 138.00
IUUC-Ogl-077924 Oryza glaberrima 34.35 3.00e-13 67.00
IUUC-Ogu-078186 Oryza glumaepatula 30.59 1.00e-47 182.00
IUUC-Oin-080183 Oryza indica 30.61 9.00e-33 132.00
IUUC-Ome-081471 Oryza meridionalis 39.55 8.00e-32 130.00
IUUC-Oni-082449 Oryza nivara 39.55 9.00e-32 129.00
IUUC-Opu-083210 Oryza punctata 37.57 2.00e-32 132.00
IUUC-Oru-085159 Oryza rufipogon 37.37 8.00e-33 133.00
IUUC-Osa-085926 Oryza sativa 37.75 8.00e-24 102.00
IUUC-Ola-087084 Oryzias latipes 41.22 4.00e-84 303.00
IUUC-Olu-087853 Ostreococcus lucimarinus 27.44 3.00e-32 130.00
IUUC-Oga-089008 Otolemur garnettii 40.45 7.00e-84 302.00
IUUC-Oar-089259 Ovis aries 38.65 2.00e-81 294.00
IUUC-Ptr-091112 Pan troglodytes 39.10 1.00e-81 295.00
IUUC-Pan-092303 Papio anubis 37.59 9.00e-19 84.30
IUUC-Psi-093050 Pelodiscus sinensis 41.13 1.00e-82 298.00
IUUC-Pma-094259 Petromyzon marinus 38.69 7.00e-69 253.00
IUUC-Pno-094798 Phaeosphaeria nodorum 33.12 1.00e-43 169.00
IUUC-Ppa-095477 Physcomitrella patens 28.60 3.00e-43 168.00
IUUC-Pfo-096855 Poecilia formosa 40.74 1.00e-82 298.00
IUUC-Pab-098096 Pongo abelii 39.15 1.00e-82 298.00
IUUC-Pop-098800 Populus trichocarpa 29.65 5.00e-47 180.00
IUUC-Pca-100187 Procavia capensis 36.89 5.00e-37 147.00
IUUC-Ppe-101759 Prunus persica 36.40 6.00e-35 140.00
IUUC-Pva-102438 Pteropus vampyrus 36.84 6.00e-31 126.00
IUUC-Pte-104197 Pyrenophora teres 28.09 2.00e-39 155.00
IUUC-Pyt-104421 Pyrenophora triticirepentis 28.65 3.00e-38 151.00
IUUC-Rno-106087 Rattus norvegicus 39.75 1.00e-82 298.00
IUUC-Sce-106276 Saccharomyces cerevisiae 25.39 1.00e-16 79.70
IUUC-Sha-106831 Sarcophilus harrisii 38.50 1.00e-77 281.00
IUUC-Sja-107681 Schizosaccharomyces japonicus 33.20 2.00e-38 152.00
IUUC-Spo-108294 Schizosaccharomyces pombe 31.52 3.00e-49 187.00
IUUC-Ssl-108613 Sclerotinia sclerotiorum 27.92 3.00e-37 148.00
IUUC-Smo-109008 Selaginella moellendorffii 31.99 5.00e-54 203.00
IUUC-Sit-110300 Setaria italica 36.51 3.00e-32 131.00
IUUC-Sly-111441 Solanum lycopersicum 30.00 3.00e-44 171.00
IUUC-Stu-111995 Solanum tuberosum 28.76 5.00e-40 157.00
IUUC-Sar-113196 Sorex araneus 37.22 3.00e-49 187.00
IUUC-Sbi-113790 Sorghum bicolor 35.26 6.00e-34 137.00
IUUC-Ssc-115609 Sus scrofa 38.75 1.00e-81 295.00
IUUC-Tgu-116927 Taeniopygia guttata 41.87 9.00e-85 305.00
IUUC-Tru-118164 Takifugu rubripes 41.50 4.00e-88 317.00
IUUC-Tsy-119151 Tarsius syrichta 37.16 2.00e-74 271.00
IUUC-Tni-120896 Tetraodon nigroviridis 42.36 3.00e-83 300.00
IUUC-Tca-121592 Theobroma cacao 28.01 2.00e-41 161.00
IUUC-Tre-122023 Trichoderma reesei 28.31 5.00e-37 147.00
IUUC-Tvi-122507 Trichoderma virens 29.52 4.00e-37 147.00
IUUC-Tae-125614 Triticum aestivum 38.54 4.00e-34 136.00
IUUC-Tur-126092 Triticum urartu 36.36 1.00e-19 89.70
IUUC-Tbe-127422 Tupaia belangeri 30.16 5.00e-41 160.00
IUUC-Ttr-129097 Tursiops truncatus 37.28 7.00e-78 282.00
IUUC-Vda-130014 Verticillium dahliae 31.41 1.00e-36 146.00
IUUC-Vpa-130782 Vicugna pacos 39.30 3.00e-81 293.00
IUUC-Vvi-131494 Vitis vinifera 36.09 7.00e-35 140.00
IUUC-Xtr-132165 Xenopus tropicalis 41.89 1.00e-82 298.00
IUUC-Xma-133205 Xiphophorus maculatus 41.29 4.00e-86 310.00
IUUC-Yli-134614 Yarrowia lipolytica 31.71 8.00e-41 159.00
IUUC-Zma-135861 Zea mays 30.73 2.00e-48 184.00
Created Date 25-Jun-2017

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